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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 1
  • extracellular 1
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plastid
Any Predictor:cytosol, extracellular, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:extracellular
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc03g081250.1.1 Tomato cytosol, plastid 42.49 68.65
VIT_16s0098g01160.t01 Wine grape cytoskeleton, cytosol, nucleus 58.47 58.39
VIT_16s0098g00950.t01 Wine grape extracellular, vacuole 58.47 53.84
AT1G32950.1 Thale cress extracellular, golgi 56.28 53.3
AT1G32960.1 Thale cress extracellular, plasma membrane 56.42 53.15
CDX98690 Canola cytosol 50.27 52.87
CDY25259 Canola endoplasmic reticulum, extracellular, plasma membrane 53.14 52.43
Bra023300.1-P Field mustard extracellular, vacuole 55.33 52.33
Bra037906.1-P Field mustard extracellular, golgi 55.74 52.31
CDX93811 Canola plasma membrane 53.69 52.26
AT4G10540.1 Thale cress extracellular, plasma membrane 55.33 52.26
AT4G10520.1 Thale cress plasma membrane 53.83 52.12
AT1G32940.1 Thale cress extracellular, plasma membrane, vacuole 55.05 52.07
Bra033170.1-P Field mustard extracellular 54.23 51.96
CDY36894 Canola extracellular 38.25 51.95
AT4G10550.3 Thale cress mitochondrion 56.01 51.64
CDY67954 Canola extracellular, golgi 54.64 51.61
Bra038766.1-P Field mustard endoplasmic reticulum 53.83 51.57
AT4G21630.1 Thale cress extracellular, plasma membrane 53.28 51.38
CDX94251 Canola extracellular 53.28 51.25
CDX98693 Canola extracellular, plasma membrane, vacuole 53.55 51.24
AT4G10510.3 Thale cress extracellular, plasma membrane 54.37 51.22
AT4G21640.1 Thale cress extracellular, vacuole 51.23 51.16
CDX94252 Canola extracellular 49.04 51.07
CDX93810 Canola plasma membrane 52.32 51.07
AT4G10530.1 Thale cress plasma membrane 51.91 50.87
CDX84657 Canola extracellular, golgi 52.73 50.86
Bra022966.1-P Field mustard extracellular, plasma membrane 52.6 50.72
AT4G21650.1 Thale cress extracellular, vacuole 53.01 50.65
CDX94044 Canola extracellular 50.27 50.62
CDX79081 Canola extracellular, plasma membrane, vacuole 51.64 50.33
Bra013544.1-P Field mustard extracellular, plasma membrane, vacuole 51.64 50.33
CDX86874 Canola endoplasmic reticulum, extracellular, golgi 51.09 50.07
AT4G21326.1 Thale cress cytosol 47.27 49.86
CDX94043 Canola plasma membrane 52.46 49.68
CDX93808 Canola extracellular, vacuole 50.68 49.6
Bra038768.1-P Field mustard cytosol 49.45 49.59
CDX99526 Canola endoplasmic reticulum, extracellular, golgi 50.82 49.4
CDY07491 Canola extracellular, golgi 51.09 49.28
CDX82843 Canola extracellular, plasma membrane, vacuole 51.5 49.22
Bra004153.1-P Field mustard extracellular, golgi 50.96 49.14
CDY49641 Canola extracellular, golgi, plastid 49.32 48.59
AT1G66210.1 Thale cress extracellular, plasma membrane 50.0 48.22
CDY65868 Canola cytosol, mitochondrion 44.26 48.21
AT1G66220.1 Thale cress extracellular, plasma membrane 49.45 48.07
Bra004154.1-P Field mustard extracellular 49.59 47.95
CDY07492 Canola extracellular 49.45 47.82
CDX91186 Canola extracellular, plasma membrane 49.45 47.63
CDY49640 Canola extracellular 49.04 47.42
AT1G32970.1 Thale cress extracellular 47.4 47.28
Bra023349.1-P Field mustard extracellular, vacuole 49.04 47.24
CDY70485 Canola extracellular, vacuole 46.58 46.46
AT5G11940.1 Thale cress extracellular, plasma membrane 48.36 46.46
KRH29358 Soybean extracellular, vacuole 49.59 46.42
EER97086 Sorghum extracellular 48.36 46.27
Bra038777.1-P Field mustard endoplasmic reticulum, extracellular, golgi 46.58 45.71
TraesCS5A01G318800.1 Wheat extracellular 47.81 45.69
HORVU5Hr1G081390.6 Barley endoplasmic reticulum, extracellular, plasma membrane 47.95 45.58
KRH58831 Soybean extracellular 49.18 45.4
Zm00001d006205_P001 Maize extracellular 47.68 45.38
TraesCS5D01G325000.1 Wheat extracellular 47.81 45.28
TraesCS5B01G319300.2 Wheat extracellular 47.54 44.85
Zm00001d021283_P001 Maize extracellular, plasma membrane 48.09 44.39
CDY58475 Canola extracellular, vacuole 46.99 43.99
CDX94032 Canola extracellular, vacuole 46.86 43.75
AT4G21323.1 Thale cress extracellular, vacuole 47.68 43.46
CDX94033 Canola endoplasmic reticulum, extracellular, plasma membrane 47.27 43.3
Solyc01g091930.2.1 Tomato nucleus 35.66 38.21
Solyc02g068280.2.1 Tomato nucleus 39.34 38.04
GSMUA_AchrUn_... Banana cytosol 5.74 37.5
Solyc03g079890.1.1 Tomato cytosol 32.51 37.19
Solyc01g006660.1.1 Tomato extracellular 33.33 36.15
Solyc01g096560.1.1 Tomato cytosol 36.34 36.14
Solyc04g081810.2.1 Tomato extracellular 37.84 35.38
Solyc09g009750.1.1 Tomato unclear 34.56 34.01
Bra038778.1-P Field mustard cytosol 46.86 32.92
CDY61569 Canola extracellular, plasma membrane 52.73 32.8
Bra023297.1-P Field mustard extracellular, golgi 55.05 26.74
CDY54842 Canola extracellular, golgi, plasma membrane 51.91 26.69
Protein Annotations
MapMan:19.4.2.1.3Gene3D:2.60.40.2310Gene3D:3.30.70.80Gene3D:3.40.50.200Gene3D:3.50.30.30GO:GO:0003674
GO:GO:0003824GO:GO:0004252GO:GO:0006508GO:GO:0008150GO:GO:0008152GO:GO:0008233
GO:GO:0008236GO:GO:0016787GO:GO:0019538InterPro:IPR036852InterPro:IPR037045UniProt:K4BI03
PFAM:PF00082PFAM:PF05922PRINTS:PR00723ScanProsite:PS00138PANTHER:PTHR43806PANTHER:PTHR43806:SF18
InterPro:Peptidase_S8/S53_domInterPro:Peptidase_S8/S53_dom_sfInterPro:Peptidase_S8_Ser-ASInterPro:Peptidase_S8_subtilisin-relInterPro:Peptidases_S8_3InterPro:S8pro/Inhibitor_I9
InterPro:S8pro/Inhibitor_I9_sfSUPFAM:SSF52743EnsemblPlantsGene:Solyc03g081260.2EnsemblPlants:Solyc03g081260.2.1UniParc:UPI000276836FSEG:seg
Description
No Description!
Coordinates
chr3:-:52152494..52156330
Molecular Weight (calculated)
79665.0 Da
IEP (calculated)
7.978
GRAVY (calculated)
-0.142
Length
732 amino acids
Sequence
(BLAST)
001: MGRRQHDDVE LATSAHHQLL TSVMGSQKAA RDSIIYSYKH GFSGFAARLT KSQAKKIAEL PDVVHVVPNH FFKLHTRRSW DYLGLSESSP PTNLLHEANM
101: GDGIIIGVLD TGIWPESEAF NDKGLGPIPS RWKGHCQSGD KFDPATACNR KLIGSKYYLK GFEAAAGRPA IKDPDFLRFD IASPRDRDGH DTHTSSTAGG
201: SFTPNASYHR LGYGTVKGGA PKARIAMYKV CWNWLIGGCT FADTMMAIDE AIHDGVDILS ISLGLEIPLY ADIDMRNGIA FASFHAVSKG ITVICSGGNE
301: GPYPQTVVNI SPWILTVAAS SIDRSFPTLI TLGNNQTFSG QSMYTGKETG FIGIAHQEIS ELEDTRFCNN LNTNDTWAAG KVVLCFIVKG DELYLPFTQQ
401: VVQEVGGLGL IVAKNPTRDL NYLTFDFPCI EVNFDVGSQL LNYIRYSRKP QVKLNPTRTH VGQPVSTHLA SFSSRGPNSV APAILKPDIA APGVNILAAV
501: LPADTPYRFE SGTSMAAPHV SGIVALLKSL HPHWSPAAIK SALVTTAWVT DPHSGEPVIS EGNPNKLADP FDFGGGLVNT NGAKDPGLVY DMGTFDYILY
601: LCSMGYNNSA ISMLIDQAAS CPIKRPSILD VNLPSLTIPS LRKKVRRTVT NVGPVNSKYE AIIEPPLGIT IKVKPETLIF NSSTKKISFT ITISTSHKYT
701: TYYYFGSLTW TDGMHRVRSP TSVRNEFPEL NG
Best Arabidopsis Sequence Match ( AT1G32950.1 )
(BLAST)
001: MRNFRSSVLV VLSLIIVLNV ARASAKSKVH IVYLGEKQHD DPKFVTESHH QMLSSLLGSK DDAHESMVYS YRHGFSGFAA KLTKSQAKKI ADSPEVIHVI
101: PDSYYELATT RIWDYLGPSA DNSKNLVSDT NMGDQTIIGV IDTGVWPESE SFNDYGVGPV PSHWKGGCEP GENFISTNCN RKLIGAKYFI NGFLAENQFN
201: ATESPDYISA RDFDGHGTHV ASIAGGSFVP NVSYKGLGRG TLRGGAPRAR IAMYKACWYI NELDGVTCSF SDIMKAIDEA IHDGVDVLSI SLGGRVPLNS
301: ETDLRDGIAT GAFHAVAKGI VVVCAGGNAG PSSQTVVNTA PWILTVAATT LDRSFATPII LGNNQVILGQ AMYIGPELGF TSLVYPEDPG NSIDTFSGVC
401: ESLNLNSNRT MAGKVVLCFT TARDFTVVST AASIVKAAGG LGLIIARNPG YNLAPCSDDF PCVAIDNELG TDILFYIRYT GSPVVKIQPS RTLVGEPVGT
501: KVATFSSRGP NSISPAILKP DIAAPGVSIL AATSPNDTLN AGGFVMRSGT SMAAPVISGV IALLKSLHPD WSPAAFRSAI VTTAWRTDPF GEQIAAESSS
601: LKVPDPFDYG GGLVNPEKAA EPGLILDMDS QDYVLYLCSA GYNDSSISRL VGKVTVCSNP KPSVLDINLP SITIPNLKDE VTLTRTVTNV GPVDSVYKVL
701: VEPPLGIQVV VTPETLVFNS KTKSVSFTVI VSTTHKINTG FYFGSLTWTD SIHNVVIPVS VRTQILQNYY DEN
Arabidopsis Description
SBT3.4Subtilisin-like protease SBT3.4 [Source:UniProtKB/Swiss-Prot;Acc:F4HPF1]
SUBAcon: [golgi,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.