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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G035100.1 Wheat extracellular 71.37 72.73
TraesCS3D01G039500.1 Wheat extracellular 70.54 71.68
Os11t0429100-00 Rice extracellular 69.08 69.41
HORVU3Hr1G006430.1 Barley cytosol 47.81 68.8
TraesCS3A01G047600.1 Wheat cytosol 46.91 67.84
TraesCS3D01G032300.1 Wheat cytosol 31.34 66.52
OQU78685 Sorghum cytosol 21.26 33.77
OQU78392 Sorghum cytosol 21.89 32.58
EES11822 Sorghum extracellular 20.64 31.73
KXG32505 Sorghum cytosol 29.67 31.01
EES15624 Sorghum plasma membrane 27.52 30.84
OQU82359 Sorghum mitochondrion 29.81 30.69
OQU82375 Sorghum mitochondrion 26.62 30.66
OQU79678 Sorghum cytosol 24.6 30.0
OQU84747 Sorghum cytosol 28.56 29.87
OQU79588 Sorghum cytosol 23.7 29.52
EES17438 Sorghum plastid 28.08 28.29
OQU79676 Sorghum cytosol 28.01 28.28
KXG27159 Sorghum cytosol 31.13 28.16
KXG22476 Sorghum cytosol, plasma membrane, plastid 27.87 28.12
OQU79592 Sorghum cytosol 18.69 28.11
OQU79679 Sorghum cytosol 28.35 28.1
EES17436 Sorghum cytosol 28.01 27.91
KXG23974 Sorghum cytosol 29.95 27.72
KXG22479 Sorghum cytosol, endoplasmic reticulum, nucleus 13.2 27.62
EER96524 Sorghum cytosol 28.7 26.82
OQU79594 Sorghum cytosol 27.94 26.68
OQU82377 Sorghum cytosol 29.33 26.68
KXG22480 Sorghum cytosol 25.85 25.89
KXG22911 Sorghum cytosol 5.35 24.06
Protein Annotations
Gene3D:3.40.50.300Gene3D:3.80.10.10MapMan:35.1UniProt:A0A1Z5R9K1ncoils:CoilGO:GO:0000166
GO:GO:0003674GO:GO:0005488GO:GO:0043531InterPro:IPR032675InterPro:LRR_dom_sfInterPro:NB-ARC
EnsemblPlants:OQU80440ProteinID:OQU80440ProteinID:OQU80440.1InterPro:P-loop_NTPasePFAM:PF00931PRINTS:PR00364
PANTHER:PTHR23155PANTHER:PTHR23155:SF884EnsemblPlantsGene:SORBI_3007G128600SUPFAM:SSF52058SUPFAM:SSF52540UniParc:UPI000B424413
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr7:-:54430093..54434612
Molecular Weight (calculated)
163190.0 Da
IEP (calculated)
7.689
GRAVY (calculated)
-0.039
Length
1439 amino acids
Sequence
(BLAST)
0001: MDAVGAASWI VQVVLEKLIG DGMDAAWAAA ASGSDVDPGS DVRRLRSRLQ SLHLVLSAAQ ERVPRARGEA LLSSLRRLRS LAGDADNLLD EMLYYQIHRQ
0101: LHPDQASDSS SSSISAVQSA ISKIRGATTK RARLGDNDTT GRIKEILEQM CEAGNDVREA IKLEKLDAFV DLGRHDAYVH PRGQTTSFFT ELKVFGRDTV
0201: KKRIVAMLTS KEACGVHLSV LPIVGNGGIG KTTLAQLVYN DAVVQDHFNK RIWISVSIHF DEVRLTREML DCLSDGVSKH DEIINLNKLQ EILEQSAKSK
0301: RLLLVLDDMW EDNDKSRWEK LLAPLRCSLL KGSVILVTTR NHSVVKMIAT MDPVHLDGLE DDDFWLLFKS CVFGDEKYEG HGNLQIIGQS IAKRLKGYPL
0401: AAKSVGALLK RSLDGGQWME ILQSDEWKLQ QGPDDIIPAL KVSYIHLPFH LQRCFSYCAL FPKGHRFDAL ELVRIWISQG LVSSKNLRME ETGHQYLNDL
0501: VDRGFFQRSA YYSMHDLMHD LALIVSSEEC LVIDSFGSRN ETFFPTIQHL SINVRFAYKW NTDDRRFNPN DIFQRKLAYI GDVVQTRNLS TLMLFGKYDA
0601: GFSETFSHVF KDVHRLRVLR LRTLSYNKDF LLSNFSKLIH LRYLELISSG PAEPFPEVIC QLYHLQVLDV EYWVHFSALP GCMNNLVNLR HFVARGELHA
0701: MIAGVGRLKF LQELKVFRVG KTTDFEIGQL NGLSELGGSL EIYNLENVGS KDESQSAGLK DKTYLQDLLL SWSSNRCVVR CITEADVLEG LHPHSRLKRL
0801: HITGYGGISS PTWLCSNLSF ICLESISLEN CTKWEILPPL GQFPFLRKLY LIQLPASREV PMVSCNYWTG SEKQVLFPCL EELVVRDCPE LRVFPLSQCS
0901: SKDECFRSFG YLREVTIYNC PRLMNLPPFG QVKSLSTISI EGVGSFPYIR LFMKALFIKG CIGPRTLDDI LLLTECSLSI IEKLTIESCL DLAYLPCESF
1001: KKLVSLERLV IVDCARLSLP LYSYSQYEVR SHFPSLLKKL VIRACGITGK MLTHVLSQLH FLVCLTIMKC PNITSLAVGL ITGTVSSSTS DCHKQTTDGL
1101: LQIPSDTSHR LQYLCIEDVS DLVLCKEFFH EFISLTTLRI TGCPHLMVTM TTEKERSKHS HSLLPPSLKD LMVSHMHDKL WPFMLSNLAS LSNLEISKSP
1201: ELTSLDLHSC KSLETLIIDK CVWLSTLEGL QSLTSLKHLR IFECPSLSKP WEPSANGESQ GLDFPLHLEK LEIDNTSFFK ICICKKLPFL QHVVFFMANN
1301: VRAFTEEQEK ALCHLTSLQV LDFCYCPDLQ SLPNELYCFQ SLKKLSIKAC PGLQSLPEKG LPASLQELYV SNCSVELKEQ CRKMKNVRRV YVDRHRSKFI
1401: TVCKMLRLYF RCLFPYSKMS TRFLCLTFHS CILYNLGKE
Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)
0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
Arabidopsis Description
Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.