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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
  • cytosol 2
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG23974 Sorghum cytosol 76.24 73.89
OQU79588 Sorghum cytosol 53.75 70.13
OQU79592 Sorghum cytosol 41.61 65.52
Os06t0707700-01 Rice cytosol 21.83 48.45
TraesCS5A01G023200.1 Wheat plastid 14.6 47.41
Os06t0707800-03 Rice cytosol 25.48 46.21
OQU82375 Sorghum mitochondrion 37.03 44.68
Os06t0707350-00 Rice cytosol, mitochondrion 17.85 44.17
KXG27159 Sorghum cytosol 45.52 43.12
EER96524 Sorghum cytosol 43.46 42.53
OQU79678 Sorghum cytosol 33.18 42.37
OQU79676 Sorghum cytosol 39.42 41.68
EES17438 Sorghum plastid 39.35 41.53
OQU82377 Sorghum cytosol 43.26 41.21
OQU79679 Sorghum cytosol 39.42 40.91
EES17436 Sorghum cytosol 39.02 40.72
Os06t0707400-01 Rice plastid 8.03 40.33
Os06t0594200-01 Rice cytosol 5.51 38.97
OQU78685 Sorghum cytosol 22.43 37.31
TraesCS5A01G023300.1 Wheat plasma membrane 17.92 35.71
Os06t0707733-00 Rice cytosol 33.18 33.83
OQU84747 Sorghum cytosol 30.52 33.43
EES11822 Sorghum extracellular 20.7 33.33
EES15624 Sorghum plasma membrane 25.55 29.98
OQU80440 Sorghum cytosol 26.68 27.94
KXG32505 Sorghum cytosol 24.22 26.51
OQU78392 Sorghum cytosol 16.12 25.13
KXG22911 Sorghum cytosol 5.31 25.0
OQU82359 Sorghum mitochondrion 23.16 24.96
KXG22476 Sorghum cytosol, plasma membrane, plastid 21.1 22.3
KXG22479 Sorghum cytosol, endoplasmic reticulum, nucleus 10.15 22.24
KXG22480 Sorghum cytosol 19.71 20.67
Protein Annotations
Gene3D:3.40.50.300Gene3D:3.80.10.10MapMan:35.1UniProt:A0A1Z5R747GO:GO:0000166GO:GO:0003674
GO:GO:0005488GO:GO:0043531InterPro:IPR032675InterPro:LRR_dom_sfInterPro:NB-ARCEnsemblPlants:OQU79594
ProteinID:OQU79594ProteinID:OQU79594.1InterPro:P-loop_NTPasePFAM:PF00931PRINTS:PR00364PANTHER:PTHR44634
PANTHER:PTHR44634:SF3EnsemblPlantsGene:SORBI_3008G167500SUPFAM:SSF52058SUPFAM:SSF52540UniParc:UPI000B8BA767SEG:seg
Description
hypothetical protein
Coordinates
chr8:+:60154291..60158929
Molecular Weight (calculated)
169559.0 Da
IEP (calculated)
6.411
GRAVY (calculated)
-0.210
Length
1507 amino acids
Sequence
(BLAST)
0001: MATAIVSAAF SLVGKALSPL TDGLLKDWAA SVELGDNVEA LEQELLAVQA LLEHTIGKEI VDNSALKKML LKLQDLGYDA DDVLDELDYF RIQDELDGTF
0101: DAADKHAKGV THNLAFNVRH TAKAVGKQIW LPSCFSSAAS SEAKANPGVN RQKAKLNSRS CCNPIHTVGK CFPCSSPPSV PDDDKDDKVD HGIGMHNNST
0201: QRNLTTNNIE PPKLRFNRVD ASKRMQDIVK KLRLLRQDVS SIITTLGSNW SNVPNIAQSR PITTSESIEQ KLYGRDHIMN SIIHVITKSE HSAEVLTVIP
0301: IVGPGGIGKT TLAQHIYHSG EVQQHFDVKV WTCVSLNFNV NKVLTEIKKY IPKVDGESSN ATNYWMNGNT YHLLLPFQKS QVQGNIIIVT TRLPVQAQIM
0401: DKKKDQSIHL QGLENTEFEE LFQKIIFGDD DKSRKDHTFL LQTGFKIASR LKGSPLAAKT VGRLLNTKLD LAHWTSILES KEWEHSNGTN DIMPALKLSF
0501: DHLPSRLHQC FSFCALFPQD YKFEREELIN FWIGQEVLHS SNGENKRVED IGLSHLTELV NYGFLENKGG MDGRTYYIIH DLLHELAQKV SSVECLRIDS
0601: SQSQISSLQV LPSIRHLSIN IDDSSAKDRL TLKNYVQDFN TLGTRLKVEK LRTLMIFGEH HGCFVKAFGD SFRQAKSLRL VFLSRSSYDV KDLLHNFYCL
0701: IHLRYLRIES SRLYEATFPN KISRFYHMKV LDAKHCDIEV LPRDVTNLVK LRHLLVQDDT IHSSITEVGK LESLQELRRF VVKQDDQGFE LRQIGHLKEL
0801: CGSLHIGSLQ NVLVLEEADE AKLMLKSRLH ELILRWENIG QSINVSTLGD HVLERLQPSS NLQKLSITGH RGGTCPSWLG MNLSLSSLQS LCLNDVNWKT
0901: FPPIGDLWLV NVPREEISIN IPEKSFGNLR RLELVNLSGL QKWVAHAPCQ LFPYLEVLII RDCSQLVELS FSHSACCRQQ GKDAKDNLFS RLLELEIVSC
1001: PQLSSFPPIP WTEALCSIKI IGISSLTNLY CIKENKYSLE IEGKEDTNDS ALWNVLAFDN LTRLEELRMF QCGPLPLRYL QMLSSLRTLK MYCSSNVFPL
1101: VEADSHVKYQ FSVEELSIME WNASGKELTQ LLTYFPKLSD LHLWSSSKVT GLGVNVTAQP APETPGPSSS AKVASEEAEC GLLLLPPQLL ELQISKCRDL
1201: SLLRSNPHDH SNEEDGGTGG RGGGLQRLTS LRRLEIWDCP KFLSAYSSYS SLSSSFPFPN SLEHLDINRA VGTEVLLPLS NLTSLSQGLL SLLAQGHLTT
1301: LSVFQTPNLF VDSDPSQVHE QEILSCSSKL QELRINDVAG FTTAAIHRSL IFSSLTKLDI FGYDKVKSIT EEQEALLFVD SLEDVTFFDC SNLQFLTERL
1401: RTLHNLKRLY IDMCDCEAIH MLPKDGIPSS LEELYIRTCP ELQSLPKDCL PDSLQKLVIR YCPAILSLPE VDDLPSSLRE LDVSESGSEE LRRQYRELIN
1501: IIPIVKT
Best Arabidopsis Sequence Match ( AT3G14460.1 )
(BLAST)
0001: MANSYLSSCA NVMVERINTS QELVELCKGK SSSALLKRLK VALVTANPVL ADADQRAEHV REVKHWLTGI KDAFFQAEDI LDELQTEALR RRVVAEAGGL
0101: GGLFQNLMAG REAIQKKIEP KMEKVVRLLE HHVKHIEVIG LKEYSETREP QWRQASRSRP DDLPQGRLVG RVEDKLALVN LLLSDDEISI GKPAVISVVG
0201: MPGVGKTTLT EIVFNDYRVT EHFEVKMWIS AGINFNVFTV TKAVLQDITS SAVNTEDLPS LQIQLKKTLS GKRFLLVLDD FWSESDSEWE SFQVAFTDAE
0301: EGSKIVLTTR SEIVSTVAKA EKIYQMKLMT NEECWELISR FAFGNISVGS INQELEGIGK RIAEQCKGLP LAARAIASHL RSKPNPDDWY AVSKNFSSYT
0401: NSILPVLKLS YDSLPPQLKR CFALCSIFPK GHVFDREELV LLWMAIDLLY QPRSSRRLED IGNDYLGDLV AQSFFQRLDI TMTSFVMHDL MNDLAKAVSG
0501: DFCFRLEDDN IPEIPSTTRH FSFSRSQCDA SVAFRSICGA EFLRTILPFN SPTSLESLQL TEKVLNPLLN ALSGLRILSL SHYQITNLPK SLKGLKLLRY
0601: LDLSSTKIKE LPEFVCTLCN LQTLLLSNCR DLTSLPKSIA ELINLRLLDL VGTPLVEMPP GIKKLRSLQK LSNFVIGRLS GAGLHELKEL SHLRGTLRIS
0701: ELQNVAFASE AKDAGLKRKP FLDGLILKWT VKGSGFVPGS FNALACDQKE VLRMLEPHPH LKTFCIESYQ GGAFPKWLGD SSFFGITSVT LSSCNLCISL
0801: PPVGQLPSLK YLSIEKFNIL QKVGLDFFFG ENNSRGVPFQ SLQILKFYGM PRWDEWICPE LEDGIFPCLQ KLIIQRCPSL RKKFPEGLPS STEVTISDCP
0901: LRAVSGGENS FRRSLTNIPE SPASIPSMSR RELSSPTGNP KSDASTSAQP GFASSSQSND DNEVTSTSSL SSLPKDRQTE DFDQYETQLG SLPQQFEEPA
1001: VISARYSGYI SDIPSTLSPY MSRTSLVPDP KNEGSILPGS SSYQYHQYGI KSSVPSPRSS EAIKPSQYDD DETDMEYLKV TDISHLMELP QNLQSLHIDS
1101: CDGLTSLPEN LTESYPNLHE LLIIACHSLE SFPGSHPPTT LKTLYIRDCK KLNFTESLQP TRSYSQLEYL FIGSSCSNLV NFPLSLFPKL RSLSIRDCES
1201: FKTFSIHAGL GDDRIALESL EIRDCPNLET FPQGGLPTPK LSSMLLSNCK KLQALPEKLF GLTSLLSLFI IKCPEIETIP GGGFPSNLRT LCISLCDKLT
1301: PRIEWGLRDL ENLRNLEIDG GNEDIESFPE EGLLPKSVFS LRISRFENLK TLNRKGFHDT KAIETMEISG CDKLQISIDE DLPPLSCLRI SSCSLLTETF
1401: AEVETEFFKV LNIPYVEIDG EIFS
Arabidopsis Description
Putative disease resistance protein At3g14460 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR5]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.