Factsheet for TraesCS5A01G023300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	nucleus
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G101600.1	Wheat	cytosol	47.49	45.44
Os06t0707350-00	Rice	cytosol, mitochondrion	34.66	43.02
TraesCS1A01G101200.1	Wheat	mitochondrion	20.37	41.73
TraesCS6A01G056800.1	Wheat	mitochondrion	34.39	34.44
TraesCS2A01G004100.1	Wheat	cytosol	15.08	33.04
TraesCS7A01G526700.1	Wheat	cytosol, plasma membrane	50.66	29.1
TraesCS1A01G373600.1	Wheat	cytosol, mitochondrion, nucleus, plastid	24.87	27.93
TraesCS7A01G555400.1	Wheat	cytosol	19.31	26.74
TraesCS2A01G473700.1	Wheat	cytosol	7.28	26.19
TraesCS7A01G554400.1	Wheat	mitochondrion	11.51	25.59
OQU82375	Sorghum	mitochondrion	39.68	24.02
TraesCS2A01G466600.1	Wheat	cytosol	13.49	23.45
TraesCS4A01G308300.1	Wheat	cytosol	45.24	23.05
OQU79588	Sorghum	cytosol	34.39	22.51
TraesCS2A01G464800.1	Wheat	nucleus	7.41	20.97
TraesCS3A01G453500.1	Wheat	cytosol, nucleus, peroxisome	18.12	20.82
TraesCS2A01G466400.1	Wheat	cytosol, extracellular, nucleus	10.05	20.0
Os06t0707733-00	Rice	cytosol	39.02	19.96
TraesCS2A01G062300.1	Wheat	cytosol	23.94	18.08
OQU79594	Sorghum	cytosol	35.71	17.92
KXG23974	Sorghum	cytosol	36.11	17.56
TraesCS3A01G047600.1	Wheat	cytosol	22.35	16.98
TraesCS2A01G465000.1	Wheat	cytosol, plastid	11.24	16.97
EER96524	Sorghum	cytosol	34.26	16.82
TraesCS2A01G003900.1	Wheat	extracellular, plasma membrane	31.88	16.47
TraesCS2A01G006800.1	Wheat	cytosol	31.22	15.98
TraesCS2A01G464600.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane, plastid	16.4	15.94
TraesCS2A01G006500.1	Wheat	extracellular, plasma membrane	30.56	15.77
TraesCS5A01G410900.1	Wheat	cytosol	28.57	15.7
TraesCS2A01G003600.1	Wheat	cytosol	28.44	15.67
TraesCS4A01G381600.1	Wheat	extracellular, golgi	26.72	15.35
TraesCS2A01G004900.1	Wheat	cytosol	30.95	14.74
TraesCS2A01G007000.1	Wheat	cytosol	27.51	14.65
TraesCS2A01G003100.1	Wheat	cytosol, extracellular	28.31	14.5
TraesCS1A01G373700.1	Wheat	cytosol	24.74	13.86
TraesCS2A01G465600.1	Wheat	cytosol, plasma membrane	27.65	13.53
TraesCS6A01G411700.1	Wheat	cytosol	17.33	12.42
TraesCS2A01G466100.1	Wheat	cytosol	24.21	12.34
TraesCS2A01G527400.1	Wheat	plasma membrane	19.58	12.02
TraesCS6A01G411300.1	Wheat	cytosol	9.66	11.44
TraesCS2A01G110900.4	Wheat	nucleus	22.75	11.42
TraesCS7A01G095800.1	Wheat	cytosol	23.15	11.23
TraesCS2A01G464700.1	Wheat	endoplasmic reticulum	24.07	11.21
TraesCS2A01G110800.1	Wheat	plasma membrane	22.62	10.57
TraesCS4A01G329100.3	Wheat	plasma membrane	24.21	10.54
TraesCS2A01G464500.1	Wheat	cytosol	7.14	10.4
TraesCS6A01G411200.1	Wheat	nucleus	17.86	9.59
TraesCS2A01G464900.1	Wheat	cytosol, endoplasmic reticulum, nucleus	11.9	8.17
OQU79592	Sorghum	cytosol	8.73	6.9
TraesCS7A01G095900.1	Wheat	cytosol	8.07	6.65
TraesCS2A01G465100.1	Wheat	endoplasmic reticulum, plasma membrane	4.1	3.76
TraesCS1A01G101700.1	Wheat	endoplasmic reticulum, extracellular	1.32	1.37
TraesCS5A01G272700.1	Wheat	cytosol	0.4	0.71
TraesCS5A01G023200.1	Wheat	plastid	0.26	0.43
TraesCS7A01G043300.1	Wheat	endoplasmic reticulum	0.4	0.39
TraesCS2A01G473800.1	Wheat	cytosol	0.26	0.35
TraesCS7A01G554200.1	Wheat	cytosol	0.13	0.28
TraesCS2A01G527300.1	Wheat	cytosol	0.13	0.23
TraesCS6A01G127200.1	Wheat	mitochondrion	0.0	0.0
TraesCS6A01G056900.1	Wheat	cytosol	0.0	0.0
TraesCS1A01G101300.1	Wheat	cytosol	0.0	0.0
TraesCS2A01G464400.1	Wheat	cytosol	0.0	0.0
TraesCS5A01G273000.1	Wheat	mitochondrion	0.0	0.0
TraesCS1A01G373500.1	Wheat	cytosol, extracellular	0.0	0.0
TraesCS2A01G006900.1	Wheat	cytosol, extracellular	0.0	0.0
Os06t0707400-01	Rice	plastid	0.0	0.0
TraesCS7A01G555300.1	Wheat	cytosol	0.0	0.0
TraesCS2A01G465200.1	Wheat	endoplasmic reticulum	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS5A01G023300.1	EnsemblPlantsGene:TraesCS5A01G023300	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_dom_sf	PANTHER:PTHR44634
PANTHER:PTHR44634:SF3	SEG:seg	SUPFAM:SSF52047	SUPFAM:SSF52058	MapMan:35.2	:

Description

No Description!

Coordinates

chr5A:+:18764853..18767123

Molecular Weight (calculated)

84992.8 Da

IEP (calculated)

7.633

GRAVY (calculated)

-0.097

Length

756 amino acids

Sequence
(BLAST)

001: MSNLVKLRHF LVQDGGFELG QIGQLVELVG LLRVHNIENV ERKEEVSAAK LIQKIHLKKL ILEWGIYGQN KDFVQEQVLE SLKPHSNLHI KGHRGANCPS
101: WLGGNLSVMN LESLSLHDVG WNILPPLGEL WSVSELGEEY QSSISSQRFQ NLKRLELVKI PRLRKWVENS TCHFLSQLEV LIVKDCSELV ELPFSRRQSE
201: QEANMTWFPR LRVLDIVDCP KLLSLPPVPW TTAASSAMIK RVGSSLEWLE YSKNYRSKLS LGVTGKDGQD GMFWNMFVFG NLAGLKELKI KNCPPLPLYH
301: LQKLTSLKSL EIDYSSNSNV LLTTDNESDI INKLPIEQLR VMSCGAREKE LTQLLSHFQD LSKLEIIGCE KVTRVGVMQQ QQMTRREEGI SDREGGVLLS
401: SPHLQELVID NCPELSLLAS SLQGLRSLHS LVIMNCPELS LLASSLQGLC SLRSFGIHGF PKSFSSYLSS PSCIRPLLTH GCLTELFIFH THKFPPFFEP
501: SRMHDKEPRS CKLQKLFTDH FTSFLNVPIY SLLSSSITSL LVSDIGKVER FSKEQEDALQ ILTSIKNLEF NKCTKLQCLP AGLHRLSSLK MLRIACCHAL
601: QSLPKDGLPT SLQVLQIDYC PAFKLLPNDS LPSSLQCLSI GRCDFLESLP KDSLPSSLQE LWIRNCDALK FLPKDGLPCS LKTLDISSCP ALELLPKDGL
701: PCSLEKLKIY DCPALNSLPS DGLPDSLLVL DVRSCKSEEL KRQCRKFKGT IPIVMD

Best Arabidopsis Sequence Match ( AT1G69550.1 )
(BLAST)

0001: MLMDSSFFLT IVAAAFAIGF FIFLRKLRIH QENEDVGSSS TSPPSSLASS TSPPSTLSSS TSHPSSSTSP PSSLSCTGTH HVFPSFRGDD VRRNFLSHIQ
0101: KEFRRKGITP FIDNEIRRGE SIGPELIKAI RESKIAIVLL SRNYASSKWC LEELVEIMKC KKEFGLTVFA IFYEVDPSHV KKLTGEFGAV FQKTCKGRTK
0201: ENIMRWRQAF EEVATIAGYD SRNWENEAAM IEEIAIEISK RLINSSPFSG FEGLIGMKAH IEKMKQLLCL DSTDERRTVG ISGPSGIGKS TIARVLHNQI
0301: SDGFQMSVFM KFKPSYTRPI CSDDHDVKLQ LEQQFLAQLI NQEDIKIHQL GTAQNFVMGK KVLIVLDGVD QLVQLLAMPK AVCLGPGSRI IITTQDQQLL
0401: KAFQIKHIYN VDFPPDHEAL QIFCIHAFGH DSPDDGFEKL ATKVTRLAGN LPLGLRVMGS HFRGMSKEDW KGELPRLRIR LDGEIGSILK FSYDVLDDED
0501: KDLFLHIACF FNDEGIDHTF EDTLRHKFSN VQRGLQVLVQ RSLISEDLTQ PMHNLLVQLG REIVRNQSVY EPGKRQFLVD GKEICEVLTS HTGSESVIGI
0601: NFEVYWSMDE LNISDRVFEG MSNLQFFRFD ENSYGRLHLP QGLNYLPPKL RILHWDYYPM TSLPSKFNLK FLVKIILKHS ELEKLWEGIQ PLVNLKVMDL
0701: RYSSHLKELP NLSTAINLLE MVLSDCSSLI ELPSSIGNAT NIKSLDIQGC SSLLKLPSSI GNLITLPRLD LMGCSSLVEL PSSIGNLINL PRLDLMGCSS
0801: LVELPSSIGN LINLEAFYFH GCSSLLELPS SIGNLISLKI LYLKRISSLV EIPSSIGNLI NLKLLNLSGC SSLVELPSSI GNLINLKKLD LSGCSSLVEL
0901: PLSIGNLINL QELYLSECSS LVELPSSIGN LINLKTLNLS ECSSLVELPS SIGNLINLQE LYLSECSSLV ELPSSIGNLI NLKKLDLSGC SSLVELPLSI
1001: GNLINLKTLN LSECSSLVEL PSSIGNLINL QELYLSECSS LVELPSSIGN LINLKKLDLS GCSSLVELPL SIGNLINLKT LNLSGCSSLV ELPSSIGNLN
1101: LKKLDLSGCS SLVELPSSIG NLINLKKLDL SGCSSLVELP LSIGNLINLQ ELYLSECSSL VELPSSIGNL INLQELYLSE CSSLVELPSS IGNLINLKKL
1201: DLNKCTKLVS LPQLPDSLSV LVAESCESLE TLACSFPNPQ VWLKFIDCWK LNEKGRDIIV QTSTSNYTML PGREVPAFFT YRATTGGSLA VKLNERHCRT
1301: SCRFKACILL VRKGDKIDCE EWGSVYLTVL EKQSGRKYSL ESPTLYPLLT EHLYTFEIEA KGVKSVELVI KFQFGRKKWE IGECGIRPLL EEDTHVESSI

Arabidopsis Description

Disease resistance protein (TIR-NBS-LRR class) [Source:UniProtKB/TrEMBL;Acc:F4I270]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.