Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G496900.1 | Wheat | nucleus | 19.52 | 23.16 |
| TraesCS2A01G004100.1 | Wheat | cytosol | 37.14 | 22.61 |
| TraesCS1A01G101200.1 | Wheat | mitochondrion | 26.67 | 15.18 |
| TraesCS2A01G466600.1 | Wheat | cytosol | 22.86 | 11.03 |
| TraesCS2A01G465000.1 | Wheat | cytosol, plastid | 23.81 | 9.98 |
| TraesCS1A01G101600.1 | Wheat | cytosol | 36.67 | 9.75 |
| TraesCS7A01G554400.1 | Wheat | mitochondrion | 12.38 | 7.65 |
| TraesCS6A01G056800.1 | Wheat | mitochondrion | 26.19 | 7.28 |
| TraesCS5A01G023300.1 | Wheat | plasma membrane | 26.19 | 7.28 |
| TraesCS3A01G453500.1 | Wheat | cytosol, nucleus, peroxisome | 20.95 | 6.69 |
| TraesCS1A01G373600.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 20.95 | 6.54 |
| TraesCS2A01G003600.1 | Wheat | cytosol | 42.38 | 6.49 |
| TraesCS2A01G464600.1 | Wheat | cytosol, mitochondrion, nucleus, plasma membrane, plastid | 23.81 | 6.43 |
| TraesCS2A01G003900.1 | Wheat | extracellular, plasma membrane | 44.29 | 6.36 |
| TraesCS2A01G007000.1 | Wheat | cytosol | 42.38 | 6.27 |
| TraesCS5A01G410900.1 | Wheat | cytosol | 40.95 | 6.25 |
| TraesCS2A01G006800.1 | Wheat | cytosol | 43.81 | 6.23 |
| TraesCS2A01G006500.1 | Wheat | extracellular, plasma membrane | 42.38 | 6.08 |
| TraesCS2A01G003100.1 | Wheat | cytosol, extracellular | 42.38 | 6.03 |
| TraesCS2A01G004900.1 | Wheat | cytosol | 44.76 | 5.92 |
| TraesCS2A01G466400.1 | Wheat | cytosol, extracellular, nucleus | 10.48 | 5.79 |
| TraesCS2A01G062300.1 | Wheat | cytosol | 23.33 | 4.9 |
| TraesCS2A01G464800.1 | Wheat | nucleus | 6.19 | 4.87 |
| TraesCS3A01G047600.1 | Wheat | cytosol | 20.0 | 4.22 |
| TraesCS4A01G308300.1 | Wheat | cytosol | 28.1 | 3.98 |
| TraesCS1A01G373700.1 | Wheat | cytosol | 23.33 | 3.63 |
| TraesCS6A01G411700.1 | Wheat | cytosol | 18.1 | 3.6 |
| TraesCS7A01G555400.1 | Wheat | cytosol | 8.57 | 3.3 |
| TraesCS2A01G466100.1 | Wheat | cytosol | 22.86 | 3.24 |
| TraesCS2A01G465600.1 | Wheat | cytosol, plasma membrane | 23.33 | 3.17 |
| TraesCS2A01G464700.1 | Wheat | endoplasmic reticulum | 23.81 | 3.08 |
| TraesCS4A01G329100.3 | Wheat | plasma membrane | 24.29 | 2.94 |
| TraesCS7A01G095800.1 | Wheat | cytosol | 20.95 | 2.82 |
| TraesCS4A01G381600.1 | Wheat | extracellular, golgi | 17.62 | 2.81 |
| TraesCS6A01G411200.1 | Wheat | nucleus | 18.57 | 2.77 |
| TraesCS7A01G526700.1 | Wheat | cytosol, plasma membrane | 14.76 | 2.36 |
| TraesCS6A01G411300.1 | Wheat | cytosol | 6.67 | 2.19 |
| TraesCS7A01G095900.1 | Wheat | cytosol | 9.52 | 2.18 |
| TraesCS2A01G110800.1 | Wheat | plasma membrane | 13.81 | 1.79 |
| TraesCS2A01G110900.4 | Wheat | nucleus | 11.9 | 1.66 |
| TraesCS1A01G101700.1 | Wheat | endoplasmic reticulum, extracellular | 2.38 | 0.68 |
| TraesCS2A01G464500.1 | Wheat | cytosol | 0.95 | 0.39 |
| TraesCS2A01G527400.1 | Wheat | plasma membrane | 1.9 | 0.32 |
| TraesCS5A01G272700.1 | Wheat | cytosol | 0.48 | 0.24 |
| OQU78685 | Sorghum | cytosol | 0.95 | 0.22 |
| TraesCS2A01G464900.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 0.95 | 0.18 |
| TraesCS7A01G043300.1 | Wheat | endoplasmic reticulum | 0.48 | 0.13 |
| TraesCS2A01G465100.1 | Wheat | endoplasmic reticulum, plasma membrane | 0.48 | 0.12 |
| TraesCS2A01G527300.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS7A01G555300.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS1A01G101300.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS7A01G554200.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS2A01G473800.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS2A01G465200.1 | Wheat | endoplasmic reticulum | 0.0 | 0.0 |
| TraesCS2A01G464400.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS5A01G023200.1 | Wheat | plastid | 0.0 | 0.0 |
| TraesCS6A01G127200.1 | Wheat | mitochondrion | 0.0 | 0.0 |
| TraesCS6A01G056900.1 | Wheat | cytosol | 0.0 | 0.0 |
| TraesCS1A01G373500.1 | Wheat | cytosol, extracellular | 0.0 | 0.0 |
| TraesCS2A01G006900.1 | Wheat | cytosol, extracellular | 0.0 | 0.0 |
| TraesCS5A01G273000.1 | Wheat | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G473700.1 | EnsemblPlantsGene:TraesCS2A01G473700 | ncoils:Coil | PANTHER:PTHR44634 | PANTHER:PTHR44634:SF1 | SEG:seg |
| SUPFAM:SSF52047 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr2A:+:715290211..715290843
Molecular Weight (calculated)
22968.6 Da
IEP (calculated)
5.261
GRAVY (calculated)
-0.007
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRGPHNPVE EIKIWRSAST GKELTQFLSH LPKLSKLELY RCENITQVAV GVDLQQKTAP VSLSISSDVT MDDTLAKEGQ QEIAEVEKEE ANTADDDGLL
101: LLPAHLSNSL TALVISYGGA VVHSLNALQA LIALWLEDCS FRHPFPSSLL HLDLSSVKGV LTLPNLTSLT RLSISRCGED LRYEGLLPLL TRGHLSNLVQ
201: RIPNFFGACD
101: LLPAHLSNSL TALVISYGGA VVHSLNALQA LIALWLEDCS FRHPFPSSLL HLDLSSVKGV LTLPNLTSLT RLSISRCGED LRYEGLLPLL TRGHLSNLVQ
201: RIPNFFGACD
001: MDRISSLPDE ILEHILSFLS TKEAALTSSL STRWKNVFVF VPSLHLDYAR QHENPREFID FVDFVNTLFN RKGNSPIKKL ALKIHLKDNQ SLQNQTHVQS
101: WIHRVLSRGG VTDLDLFITF KGKFQLVPLL IFKSNTLVKL RLGRGFTIKL CHENVYLPML KTLCLDTVDF DGDHNVFETL LPRCPLLEEL VLEDQRWKQW
201: CGSVSSPSLK RLRIRFFHIP IISLDVPGLV YLELSCIFGS KYANVNLDSL VEARLNHWVE EQELRKLRDG SSHLVPADMM DLITGIRKVK VLHLTSDALE
301: LFYFSGQELP MFDNLVYLSI ASDKKQGWQI LPLLIKNSPN LETLVFKGLE HYTTKQCGDA CVCSGILGKS SSCLSSSRVK VLEIWSYQGT SKELKQMGHF
401: LMKLQFLELV KIRAVSNLQV PIDIQYLLKL PRASSNCKIQ AIF
101: WIHRVLSRGG VTDLDLFITF KGKFQLVPLL IFKSNTLVKL RLGRGFTIKL CHENVYLPML KTLCLDTVDF DGDHNVFETL LPRCPLLEEL VLEDQRWKQW
201: CGSVSSPSLK RLRIRFFHIP IISLDVPGLV YLELSCIFGS KYANVNLDSL VEARLNHWVE EQELRKLRDG SSHLVPADMM DLITGIRKVK VLHLTSDALE
301: LFYFSGQELP MFDNLVYLSI ASDKKQGWQI LPLLIKNSPN LETLVFKGLE HYTTKQCGDA CVCSGILGKS SSCLSSSRVK VLEIWSYQGT SKELKQMGHF
401: LMKLQFLELV KIRAVSNLQV PIDIQYLLKL PRASSNCKIQ AIF
Arabidopsis Description
F-box/LRR-repeat protein At2g42720 [Source:UniProtKB/Swiss-Prot;Acc:Q6DR13]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.