Factsheet for TraesCS6A01G056900.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G023200.1	Wheat	plastid	46.87	56.47
TraesCS1A01G101300.1	Wheat	cytosol	57.07	54.53
TraesCS6A01G127200.1	Wheat	mitochondrion	17.17	53.63
TraesCS2A01G473800.1	Wheat	cytosol	53.67	52.26
TraesCS1A01G101700.1	Wheat	endoplasmic reticulum, extracellular	60.64	46.37
TraesCS2A01G006900.1	Wheat	cytosol, extracellular	23.61	39.52
TraesCS1A01G373500.1	Wheat	cytosol, extracellular	32.74	36.9
TraesCS2A01G527300.1	Wheat	cytosol	25.94	33.03
TraesCS5A01G273000.1	Wheat	mitochondrion	18.6	32.6
TraesCS7A01G043300.1	Wheat	endoplasmic reticulum	42.58	31.11
TraesCS7A01G554200.1	Wheat	cytosol	17.53	27.84
TraesCS6B01G075700.1	Wheat	cytosol	77.46	27.69
TraesCS2A01G465200.1	Wheat	endoplasmic reticulum	22.18	27.07
TraesCS2A01G464400.1	Wheat	cytosol	4.65	26.8
TraesCS7A01G555300.1	Wheat	cytosol	29.52	26.57
TraesCS4A01G308300.1	Wheat	cytosol	54.92	20.69
TraesCS7A01G526700.1	Wheat	cytosol, plasma membrane	48.3	20.52
TraesCS5A01G272700.1	Wheat	cytosol	14.67	19.52
KXG27159	Sorghum	cytosol	55.1	19.36
TraesCS4A01G381600.1	Wheat	extracellular, golgi	42.93	18.24
TraesCS2A01G465100.1	Wheat	endoplasmic reticulum, plasma membrane	25.76	17.45
Os12t0482100-00	Rice	cytosol	46.69	17.13
Os12t0481700-00	Rice	cytosol	46.69	17.13
Os12t0481400-00	Rice	cytosol	45.62	16.95
OQU82377	Sorghum	cytosol	47.94	16.94
TraesCS2A01G003900.1	Wheat	extracellular, plasma membrane	41.14	15.72
TraesCS2A01G007000.1	Wheat	cytosol	39.53	15.56
TraesCS2A01G006500.1	Wheat	extracellular, plasma membrane	40.79	15.56
TraesCS2A01G006800.1	Wheat	cytosol	40.97	15.5
TraesCS7A01G095900.1	Wheat	cytosol	25.04	15.27
TraesCS5A01G410900.1	Wheat	cytosol	37.03	15.04
TraesCS2A01G003600.1	Wheat	cytosol	36.31	14.8
TraesCS2A01G527400.1	Wheat	plasma membrane	32.02	14.54
TraesCS2A01G003100.1	Wheat	cytosol, extracellular	36.85	13.96
TraesCS2A01G004900.1	Wheat	cytosol	39.36	13.86
TraesCS1A01G373700.1	Wheat	cytosol	32.2	13.34
TraesCS2A01G464900.1	Wheat	cytosol, endoplasmic reticulum, nucleus	24.69	12.53
TraesCS6A01G411200.1	Wheat	nucleus	28.44	11.29
TraesCS2A01G466100.1	Wheat	cytosol	27.01	10.18
TraesCS2A01G110900.4	Wheat	nucleus	27.19	10.09
TraesCS2A01G465600.1	Wheat	cytosol, plasma membrane	27.37	9.9
TraesCS6A01G411300.1	Wheat	cytosol	10.91	9.56
TraesCS2A01G110800.1	Wheat	plasma membrane	27.19	9.39
TraesCS2A01G464500.1	Wheat	cytosol	8.41	9.06
TraesCS4A01G329100.3	Wheat	plasma membrane	27.37	8.81
TraesCS7A01G095800.1	Wheat	cytosol	24.15	8.66
TraesCS2A01G464700.1	Wheat	endoplasmic reticulum	24.87	8.56
TraesCS6A01G411700.1	Wheat	cytosol	14.13	7.49
TraesCS2A01G466400.1	Wheat	cytosol, extracellular, nucleus	3.22	4.74
TraesCS3A01G047600.1	Wheat	cytosol	4.47	2.51
TraesCS7A01G554400.1	Wheat	mitochondrion	0.89	1.47
TraesCS1A01G373600.1	Wheat	cytosol, mitochondrion, nucleus, plastid	0.0	0.0
TraesCS1A01G101600.1	Wheat	cytosol	0.0	0.0
TraesCS1A01G101200.1	Wheat	mitochondrion	0.0	0.0
TraesCS7A01G555400.1	Wheat	cytosol	0.0	0.0
TraesCS6A01G056800.1	Wheat	mitochondrion	0.0	0.0
TraesCS2A01G004100.1	Wheat	cytosol	0.0	0.0
TraesCS5A01G023300.1	Wheat	plasma membrane	0.0	0.0
TraesCS3A01G453500.1	Wheat	cytosol, nucleus, peroxisome	0.0	0.0
TraesCS2A01G062300.1	Wheat	cytosol	0.0	0.0
TraesCS2A01G473700.1	Wheat	cytosol	0.0	0.0
TraesCS2A01G466600.1	Wheat	cytosol	0.0	0.0
TraesCS2A01G465000.1	Wheat	cytosol, plastid	0.0	0.0
TraesCS2A01G464800.1	Wheat	nucleus	0.0	0.0
TraesCS2A01G464600.1	Wheat	cytosol, mitochondrion, nucleus, plasma membrane, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS6A01G056900.1	EnsemblPlantsGene:TraesCS6A01G056900	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0043531	InterPro:AAA+_ATPase	InterPro:NB-ARC	InterPro:P-loop_NTPase	ncoils:Coil	PANTHER:PTHR44634
PANTHER:PTHR44634:SF3	PFAM:PF00931	PRINTS:PR00364	SEG:seg	SMART:SM00382	SUPFAM:SSF52540
TIGR:cd00009	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr6A:-:29879702..29881381

Molecular Weight (calculated)

62892.7 Da

IEP (calculated)

6.600

GRAVY (calculated)

-0.285

Length

559 amino acids

Sequence
(BLAST)

001: MDTAIGAAKW VLGKALAPVT DGLLESWAAS ADLDRNIDAL KMELLYAHGM LENVQGRGIH GVALKELLHK LQQLAYGADD VLDELEYFRI QDSLKGTYHA
101: AGVNDVCCIQ GIRTNIEHTA RHAISKLKCL PCLGAASRGG DQEIDPGDHQ DYDLLGIRLR GRRGIGSSPL TPTNKAGVNK VDGGCMPRVI SSARNAAHTF
201: GKHFPCYSSI SVHGDGAQAI MSECASERDI ETKELMFDRV QMSRTMIDMV GQLKEVCAKV SIILNLDLLG SSHNRTQEIA IKRSKTTSEI IEYELYGRDD
301: QKRKIKNGII SHEYCPKQLN VLPIFGPGGI GKTTFTQHIC QEVNSSFQAS IWICVSLDFN ADRLAQEIVN KIDRVDDEKQ NASVEELIKQ RLKAKRFLLV
401: LDDVWVYQED EWEKLMAPFR KVESKGNLIV VTTRIPKVAE MVRTTNHKIE LERLGDADTM RFFEACVFGN ELQPWEKHYE LSETGREVVR HLKGSPLATK
501: TVGRLLRNQL TLDHWERILE SKEWELETSE SDIMPALKLS FDFLPFHLKQ LFVYCALFP

Best Arabidopsis Sequence Match ( AT3G14470.1 )
(BLAST)

0001: MTGIGEMFLA AFLQALFQTL VSEPFRSFFK RRELNENLLE RLSTALLTIT AVLIDAEEKQ ITNPVVEKWV NELRDVVYHA EDALDDIATE ALRLNIGAES
0101: SSSNRLRQLR GRMSLGDFLD GNSEHLETRL EKVTIRLERL ASQRNILGLK ELTAMIPKQR LPTTSLVDES EVFGRDDDKD EIMRFLIPEN GKDNGITVVA
0201: IVGIGGVGKT TLSQLLYNDQ HVRSYFGTKV WAHVSEEFDV FKITKKVYES VTSRPCEFTD LDVLQVKLKE RLTGTGLPFL LVLDDLWNEN FADWDLLRQP
0301: FIHAAQGSQI LVTTRSQRVA SIMCAVHVHN LQPLSDGDCW SLFMKTVFGN QEPCLNREIG DLAERIVHKC RGLPLAVKTL GGVLRFEGKV IEWERVLSSR
0401: IWDLPADKSN LLPVLRVSYY YLPAHLKRCF AYCSIFPKGH AFEKDKVVLL WMAEGFLQQT RSSKNLEELG NEYFSELESR SLLQKTKTRY IMHDFINELA
0501: QFASGEFSSK FEDGCKLQVS ERTRYLSYLR DNYAEPMEFE ALREVKFLRT FLPLSLTNSS RSCCLDQMVS EKLLPTLTRL RVLSLSHYKI ARLPPDFFKN
0601: ISHARFLDLS RTELEKLPKS LCYMYNLQTL LLSYCSSLKE LPTDISNLIN LRYLDLIGTK LRQMPRRFGR LKSLQTLTTF FVSASDGSRI SELGGLHDLH
0701: GKLKIVELQR VVDVADAAEA NLNSKKHLRE IDFVWRTGSS SSENNTNPHR TQNEAEVFEK LRPHRHIEKL AIERYKGRRF PDWLSDPSFS RIVCIRLREC
0801: QYCTSLPSLG QLPCLKELHI SGMVGLQSIG RKFYFSDQQL RDQDQQPFRS LETLRFDNLP DWQEWLDVRV TRGDLFPSLK KLFILRCPEL TGTLPTFLPS
0901: LISLHIYKCG LLDFQPDHHE YSYRNLQTLS IKSSCDTLVK FPLNHFANLD KLEVDQCTSL YSLELSNEHL RGPNALRNLR INDCQNLQLL PKLNALPQNL
1001: QVTITNCRYL RQPMEQQPQY HHPQFHLPRS NVSGSPKSHG SHRSYDSRSS SRYD

Arabidopsis Description

RPPL1Putative disease resistance RPP13-like protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR4]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.