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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plastid 1
  • plasma membrane 6
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • golgi 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os02t0615500-01 Rice plasma membrane 59.77 54.9
EES05423 Sorghum plasma membrane 55.97 53.54
OQU85311 Sorghum extracellular 25.55 52.38
OQU82892 Sorghum plasma membrane 47.41 50.22
OQU79190 Sorghum plasma membrane 45.83 43.75
KXG27879 Sorghum plasma membrane 44.35 40.62
KXG27868 Sorghum vacuole 34.85 40.49
KXG21282 Sorghum extracellular, vacuole 21.44 39.8
KRH73172 Soybean extracellular, vacuole 13.83 39.46
CDX71113 Canola plasma membrane 26.61 36.73
PGSC0003DMT400013987 Potato cytosol, nucleus, plasma membrane 39.6 36.62
CDY00454 Canola plasma membrane 38.12 36.58
Bra015204.1-P Field mustard plasma membrane 38.75 36.41
Bra018128.1-P Field mustard plasma membrane 39.39 35.87
PGSC0003DMT400031158 Potato plasma membrane 36.01 35.56
AT3G47090.1 Thale cress plasma membrane 37.8 35.48
KRH76431 Soybean plasma membrane 28.93 35.45
Bra014313.1-P Field mustard cytosol 26.93 35.27
Bra005562.1-P Field mustard plasma membrane 37.7 34.8
Bra029191.1-P Field mustard plasma membrane 35.27 34.4
EES08077 Sorghum plasma membrane, vacuole 18.48 34.18
CDY49183 Canola extracellular, plasma membrane 23.97 32.99
CDY65706 Canola extracellular, plasma membrane 23.86 32.85
CDY60624 Canola plasma membrane 23.44 32.17
OQU76500 Sorghum cytosol, mitochondrion, nucleus, plasma membrane 26.4 30.86
VIT_18s0001g15800.t01 Wine grape cytosol, peroxisome 16.68 29.42
Protein Annotations
Gene3D:1.10.510.10Gene3D:3.30.200.20Gene3D:3.80.10.10MapMan:50.2.7UniProt:A0A1Z5RPF3GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674GO:GO:0005488GO:GO:0005515
GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016310GO:GO:0016740
GO:GO:0019538InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typ
InterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtypEnsemblPlants:OQU85325ProteinID:OQU85325ProteinID:OQU85325.1
PFAM:PF00069PFAM:PF00560PFAM:PF08263PFAM:PF13855ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR43887PANTHER:PTHR43887:SF32InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SMART:SM00369EnsemblPlantsGene:SORBI_3004G217500SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASSignalP:SignalP-noTM
UniParc:UPI000B8BAEB5SEG:seg::::
Description
hypothetical protein
Coordinates
chr4:+:56696473..56700315
Molecular Weight (calculated)
104220.0 Da
IEP (calculated)
7.252
GRAVY (calculated)
0.026
Length
947 amino acids
Sequence
(BLAST)
001: MLMLLALLVI SHGVGNISCS TVPENSTDML ALLDFKAVIT NDPSGSLSSW NTSIHYCKWR GVTCNTKNHG RVTALRLYNQ GLSGSISPSV GNLTFLHTLD
101: LSTNQFSGQI PHLNNLQKMQ ILNLSYNSLD GVIPDTLTNC SNLKQLHLYH NLLNGAIPRE IGLLKNLVFF ALNNNNLTGT IPPSLGNITH IKEFYLQVNH
201: LKGTIPDELG HFSNISMLGL GGNMLSGTIP LSLFNLSLLQ VLELRTNQLR GSLPSNMGDR FSNLQKLLLG ENWLKGRIPD SLGNATTLKQ LVLQTNNFTG
301: QIPSSFGKLS SLSELDLGSN MLEAKDSESW EFLHALENCS ALRVLALSNN QLQGVIPNSV GNLTANLQYL FLGGNKLSGT VPSSIGKLAG LIYLTLDGNS
401: LIGSIDGWIR NLKNLQYLYL SENNLSGPIP PIIGNLTQLA RLLLDNNGFE EGSIPLEISN LKQLINLELA SNKLITGEIP DDLTLCQYLV TIDMEHNFIV
501: GNIPESVGSL ESLNKLSLAH NNLSGTIPAA LGSLKLLNML DLSYNNLQGE IPRDGIFRNA SAVYLDGNMG LCGGAFDLHM PSCPSFSERI ESKCTWFNIF
601: TPIVGFMSLI MFIYKFPRIS YKDIAEATRN FSELNLIGRG SYGSVYRGKL TLAKIQVAIK VFDLGIQCAD RSFLSECEAL RAIKHRNIVP ILTACSTIDN
701: KGNDFRALVY EFMSNGNLDT WLHHRCAGVA PKYLTLAQRI SIAVGIADAL AYLHNDCGRP IIHCDLKPTN ILLDDDMNAH LGDFGISRLL RDFPSTTLGH
801: SGSNGSVTVK GTIGYISPEY AQSVHASTCG DVYTFGIVLL EMQMLIGKRP TDSMFEGEMN IVSFVEKNFP KQMSHIIDAH LQEECMSKRF LLARVERGNE
901: VHQCLMSLVG IALSCTRLLP SQRMNMRQRY SLTYEPKEHI HRLIKSK
Best Arabidopsis Sequence Match ( AT3G47090.1 )
(BLAST)
0001: MRLFLLLAFN ALMQLEAYGF TDESDRQALL EIKSQVSESK RDALSAWNNS FPLCSWKWVR CGRKHKRVTR LDLGGLQLGG VISPSIGNLS FLIYLDLSNN
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR
Arabidopsis Description
Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD64]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.