CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane, nucleus, cytosol

Predictor Summary:

nucleus 2
mitochondrion 3
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	plasma membrane	28.89	37.93
Os04t0122200-00	Rice	plasma membrane	43.21	37.55
VIT_18s0001g09550.t01	Wine grape	plasma membrane	40.0	37.28
Bra039532.1-P	Field mustard	plastid	38.02	32.12
CDY36707	Canola	cytosol	32.1	31.59
CDY26403	Canola	plasma membrane, vacuole	30.37	31.5
CDY36706	Canola	plasma membrane, vacuole	37.04	31.38
OQU85311	Sorghum	extracellular	15.8	27.71
KXG21282	Sorghum	extracellular, vacuole	17.28	27.45
OQU79190	Sorghum	plasma membrane	32.96	26.92
KXG27879	Sorghum	plasma membrane	34.07	26.69
OQU85325	Sorghum	plasma membrane	30.86	26.4
EES05423	Sorghum	plasma membrane	32.1	26.26
OQU82892	Sorghum	plasma membrane	28.52	25.84
KXG27868	Sorghum	vacuole	25.56	25.4
EES08077	Sorghum	plasma membrane, vacuole	15.31	24.22
PGSC0003DMT400073110	Potato	cytosol	31.73	22.76

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	UniProt:A0A1W0VTB2	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR032675
InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt_typical-subtyp	EnsemblPlants:OQU76500	ProteinID:OQU76500	ProteinID:OQU76500.1
PFAM:PF00069	ScanProsite:PS00107	PFscan:PS50011	PANTHER:PTHR43887	PANTHER:PTHR43887:SF26	InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BS	SMART:SM00369	EnsemblPlantsGene:SORBI_3010G155401	SUPFAM:SSF52058	SUPFAM:SSF56112	TMHMM:TMhelix
UniParc:UPI0009DC8F1D	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr10:-:45758087..45771362

Molecular Weight (calculated)

88273.4 Da

IEP (calculated)

8.054

GRAVY (calculated)

0.051

Length

810 amino acids

Sequence
(BLAST)

001: MAVCRVWKRF IDREHLSGCK APHNTSTSGG VLCKHGGRVT ELNLQGLDLV GTISPHLGNL SALRSLCLQN NHFVGNIPNQ IGSLVFPQPS QSIPSTITNC
101: TNPMTMDLST NIISGTIPSS IHHLHKLGVL KIGANQLDGS IPPSISNLSW LKTLDVHTNN LIGKIPEELG RLNNIQQIQL SINNLEGIVP GLLYNQSTLS
201: LIGFAANDLH GQIQFLCIYS RLPNLRLFHI CINKFNGTIP PSLHNLTKIE SIRMSHNFLS SSVPPGLSRL GNLVLYNIGF NQIADNASIL VELTNCTKLQ
301: LLFDRTVPVY LGGNKISGQI PLLNMSHNLT VSSISGSISP DIGQLTELTK LLLNWNELSG PITIEIGNLT SLTTLEISKK EIVSRITDEL GHLHHALSLD
401: LSSNNLHGHI PASLFAISSL NTILNLSNNS LTGALAENIG QLKKTNQLTG DIPASLANLQ ALQLLNLSMN DLNGLVPCTG IFANHSAVHL DGNQMLCYSS
501: LTCYNHHRKL HVMIAVAVAA ASAAAISILI LKFLKLLPRR HLAKAKTRAI DILSELCRVT NTFDQTNLIG VGSFGSVYKA VHVGTAVAVK VLDLHKMGAP
601: KSWVLDALEY MHNDCGGQAV HCDTKPSDVL LDGDMTAKVG DFGVTRLMAP VQLEQQSISS VQGLTGSIVY NPPEYGYEGK PSPKGVYSYG VMLLEMITGR
701: SPLQQTFRED MNLAKWVREN LPHEARQVID QRLISSTLDA SVEGVQRSRA EHLLPNCLLI PMMEVALSCV VESPYERSGM HDCLLRLKKL KETFLHNRRT
801: IYAAGEVDRN

Best Arabidopsis Sequence Match ( AT1G17230.1 )
(BLAST)

0001: MRGRICFLAI VILCSFSFIL VRSLNEEGRV LLEFKAFLND SNGYLASWNQ LDSNPCNWTG IACTHLRTVT SVDLNGMNLS GTLSPLICKL HGLRKLNVST
0101: NFISGPIPQD LSLCRSLEVL DLCTNRFHGV IPIQLTMIIT LKKLYLCENY LFGSIPRQIG NLSSLQELVI YSNNLTGVIP PSMAKLRQLR IIRAGRNGFS
0201: GVIPSEISGC ESLKVLGLAE NLLEGSLPKQ LEKLQNLTDL ILWQNRLSGE IPPSVGNISR LEVLALHENY FTGSIPREIG KLTKMKRLYL YTNQLTGEIP
0301: REIGNLIDAA EIDFSENQLT GFIPKEFGHI LNLKLLHLFE NILLGPIPRE LGELTLLEKL DLSINRLNGT IPQELQFLPY LVDLQLFDNQ LEGKIPPLIG
0401: FYSNFSVLDM SANSLSGPIP AHFCRFQTLI LLSLGSNKLS GNIPRDLKTC KSLTKLMLGD NQLTGSLPIE LFNLQNLTAL ELHQNWLSGN ISADLGKLKN
0501: LERLRLANNN FTGEIPPEIG NLTKIVGFNI SSNQLTGHIP KELGSCVTIQ RLDLSGNKFS GYIAQELGQL VYLEILRLSD NRLTGEIPHS FGDLTRLMEL
0601: QLGGNLLSEN IPVELGKLTS LQISLNISHN NLSGTIPDSL GNLQMLEILY LNDNKLSGEI PASIGNLMSL LICNISNNNL VGTVPDTAVF QRMDSSNFAG
0701: NHGLCNSQRS HCQPLVPHSD SKLNWLINGS QRQKILTITC IVIGSVFLIT FLGLCWTIKR REPAFVALED QTKPDVMDSY YFPKKGFTYQ GLVDATRNFS
0801: EDVVLGRGAC GTVYKAEMSG GEVIAVKKLN SRGEGASSDN SFRAEISTLG KIRHRNIVKL YGFCYHQNSN LLLYEYMSKG SLGEQLQRGE KNCLLDWNAR
0901: YRIALGAAEG LCYLHHDCRP QIVHRDIKSN NILLDERFQA HVGDFGLAKL IDLSYSKSMS AVAGSYGYIA PEYAYTMKVT EKCDIYSFGV VLLELITGKP
1001: PVQPLEQGGD LVNWVRRSIR NMIPTIEMFD ARLDTNDKRT VHEMSLVLKI ALFCTSNSPA SRPTMREVVA MITEARGSSS LSSSSITSET PLEEANSSKE
1101: I

Arabidopsis Description

Leucine-rich receptor-like protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AVG7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.