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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 5
  • cytosol 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY26403 Canola plasma membrane, vacuole 76.12 93.47
CDY36706 Canola plasma membrane, vacuole 93.01 93.31
VIT_18s0001g09550.t01 Wine grape plasma membrane 46.51 51.32
GSMUA_AchrUn_... Banana plasma membrane 30.55 47.49
Os04t0122200-00 Rice plasma membrane 41.92 43.13
OQU76500 Sorghum cytosol, mitochondrion, nucleus, plasma membrane 32.12 38.02
Bra005562.1-P Field mustard plasma membrane 40.15 37.52
Bra014313.1-P Field mustard cytosol 28.26 37.48
Bra015204.1-P Field mustard plasma membrane 38.27 36.41
Bra018128.1-P Field mustard plasma membrane 39.42 36.35
Bra029191.1-P Field mustard plasma membrane 35.24 34.81
PGSC0003DMT400073110 Potato cytosol 35.87 30.47
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.12Gene3D:3.30.200.20Gene3D:3.80.10.10EnsemblPlantsGene:Bra039532EnsemblPlants:Bra039532.1
EnsemblPlants:Bra039532.1-PGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0004674
GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0006464GO:GO:0006468
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021GO:GO:0016301
GO:GO:0016310GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675
InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtypUniProt:M4FEL1
PFAM:PF00069PFAM:PF00560PFAM:PF08263PFAM:PF13855ScanProsite:PS00107ScanProsite:PS00108
PFscan:PS50011PANTHER:PTHR43887PANTHER:PTHR43887:SF26InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220
SMART:SM00369SUPFAM:SSF52058SUPFAM:SSF56112InterPro:Ser/Thr_kinase_ASTMHMM:TMhelixUniParc:UPI000253E9BC
SEG:seg:::::
Description
AT3G47110 (E=2e-165) | leucine-rich repeat transmembrane protein kinase, putative
Coordinates
chrScaffold000167:-:264083..267097
Molecular Weight (calculated)
104792.0 Da
IEP (calculated)
8.061
GRAVY (calculated)
-0.023
Length
959 amino acids
Sequence
(BLAST)
001: MSQNPQSLSF SWDPNTSPCN WTGVTCDTRI RRVTSINLSG HGLTGSISPS IGNLSFLTSL QLQNNQLRGP IPKEITNLFR LRVLNLSSNS LDGSLPSNLS
101: KLIELRALDL TSNMITGIVP NQLGDLKNLT ILNLGKNLLH GPIPPSLSNI SSLTVLSLGT NSLSGPVPNE LGRLQRLQVL DLTINNLSGT IPPSIYNMSS
201: LESLVIASNN FWGQFPSNIG YTLPKLLVFN VCFNKFSGEI PASLYNLTNI KVIRAAHNLL EGTIPSGLGN LPFLEMYNIG FNKLVWGRDQ NLDSFIKSFS
301: NSSKLNFLAF DGNLLEGVIP VSIGNLPKNL SKLFMGGNRF TGIIPESIGD LTGLTLFNIS DNSLTGEIPQ DIGKLKGLQV LELARNQLTG RIPDSIGDLG
401: GLNEINLSHN KLQGRISLSF ENFKNMLSMD LSSNMLNGSI PNGVLNLPSL SAVLNLSSNL FSGPIPQDIS RLESLVSLDL SSNNFSGHIP SSIKDCQSLE
501: KLNMAGNNLD GPIPDALAEV KGLEFLDLSS NQLSGVIPPR LQDLQAMKFL NISFNNLEGW VPNRGVFKDH SKAYMEGNPK LCIHTCRKTR THRKLLKVSV
601: ITCAVGLIAI CVISFLIWKR MEKRSTTSTS SSNSLLKEPF MNVSYDELRR ATENFNPRNI LGVGSFGSVF KGVIRGVDVA VKVIDLKANG YYKGFIAECE
701: ALRNVRHRNL VKLVTSCSSI DFKNNEFLAL VYEFLSNGSL EEWIKGKHRK PDGSVGLNLE ERVNVAIDIA SALDYLHNDC EVHVVHCDLK PSNILLTEDM
801: VTKVGDFGLA RVLFDASDDC HHASISSTHV LKGSIGYIPP EYGLGEKPSQ AGDVYSFGVM LLELLSGKSP MDERFEGDQN LISWISYGFQ SNAIMEVIDP
901: KLKGLIDVSG AQLHAKLDCL KKTIEVGLAC TAYAASERMK MRNVLRLLKE AKGMLIKGN
Best Arabidopsis Sequence Match ( AT3G47090.1 )
(BLAST)
0001: MRLFLLLAFN ALMQLEAYGF TDESDRQALL EIKSQVSESK RDALSAWNNS FPLCSWKWVR CGRKHKRVTR LDLGGLQLGG VISPSIGNLS FLIYLDLSNN
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR
Arabidopsis Description
Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD64]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.