Factsheet for PGSC0003DMT400073110

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
plasma membrane 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0052g00340.t01	Wine grape	plasma membrane	24.89	45.62
VIT_11s0052g01430.t01	Wine grape	plasma membrane	35.43	43.1
GSMUA_AchrUn_...	Banana	plasma membrane	20.11	36.79
PGSC0003DMT400013987	Potato	cytosol, nucleus, plasma membrane	32.77	36.13
Bra039532.1-P	Field mustard	plastid	30.47	35.87
CDY36707	Canola	cytosol	25.69	35.24
CDY36706	Canola	plasma membrane, vacuole	29.41	34.73
CDY26403	Canola	plasma membrane, vacuole	24.0	34.7
PGSC0003DMT400031158	Potato	plasma membrane	29.23	34.41
Os04t0122200-00	Rice	plasma membrane	27.02	32.73
OQU76500	Sorghum	cytosol, mitochondrion, nucleus, plasma membrane	22.76	31.73

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.12	Gene3D:3.30.200.20	Gene3D:3.80.10.10	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M1CRJ5
PFAM:PF00069	PFAM:PF13855	EnsemblPlantsGene:PGSC0003DMG400028435	PGSC:PGSC0003DMG400028435	EnsemblPlants:PGSC0003DMT400073110	ScanProsite:PS00107
ScanProsite:PS00108	PFscan:PS50011	PANTHER:PTHR43887	PANTHER:PTHR43887:SF21	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS
SMART:SM00220	SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	TMHMM:TMhelix
UniParc:UPI000296B13E	SEG:seg	:	:	:	:

Description

Serine-threonine protein kinase, plant-type [Source:PGSC_GENE;Acc:PGSC0003DMG400028435]

Coordinates

chr2:+:31795876..31804506

Molecular Weight (calculated)

124562.0 Da

IEP (calculated)

6.851

GRAVY (calculated)

0.083

Length

1129 amino acids

Sequence
(BLAST)

0001: MFQLKPNLFL QQHQPGFHIY IEIGRATQGF DQCNLLGSGG FGSVYKGMFE NGMTLAIKVF NLRIEGAFKS FDIECEVLHN LRHRNLAKVI SSCTNMDFKA
0101: LLLEYMPNGS LEKCDLKPSN VLLDERLVGH VSDFGLAKLF GEGESVAHTK TLATMGYIAP VCDWIGVTCG SRHHRVRALN VSNLNILGNI PPQLGNLSFL
0201: VSLDLSSNNF QGDLPQDLSR LRRLKVMNLA NNNFTGQIPK DFGNLMRLEK LVLVSNKLSG SIPFSIFNIS SLEILALTYN QLSGSLPVDI CRRLQKIKSI
0301: SIISNHLSGQ IPTGLSNCTE LYELSLSYNN FSGTIPPEIV NLERLQFLNL GGNNLQGIIP REIGNLHKLE ILYLQINKLS GSIPEGLFNI STLTEVSVFF
0401: NNLSGSLPSA SGYWQTNLQL LNLGQNNIGG VIPTSISNSS NLEIIDLSIN KFSGQIPNSL GDLRDLEYLD LFVNNLSSPH LSILTSLVNC RYLKEVILGE
0501: NPLYGVLPDS IGNLSISIME LELYSSEIRG QIPLGIGNLS NLNTLSLSGN DLTGSVPTTL CDLHILQRLG LGLNRLSGSL PECLCKMSSL GLLSLYYNRI
0601: SGPIPSCIGN ATSLRNAYLN SNRLTNIPTS LWSLKYLLVL NLSNNSLIGS IPPELGNLKA ITSINLSRNH LSGSIPSTIG DLQSLVYLSL AYNELQGSIP
0701: ESLGKMISLE SANLSNNILS GTIPKSLELL RYLKNFNVSF NRLEGEIPSK GPFLNFNSQS FMGNGGLCGG LVFQPCMTRS FHHSRRGKLL LIILVSLGAA
0801: VMVLGSIVVF MLRRRWNRNI PTEAESFAAT TLARISYIEI ERATQGFDQC NLLGSGGFGS VYKGMFANGM TLAIKVFNLQ VEGALKSFDA ECEVLRNLRH
0901: RNLTKVVSSC TNLDFKALLL EYMPNGSLEL WLHSDDRFLN MIQRLDIMID VAFALEYLHH GYETVVVHSD LKPSNVLLDE KLVGHVSDFG LTKLLGEGES
1001: IAHTNTLATM GYIAPEYGSV GLVSTRCDVY SYGIMLMETF TRNRPYDEMF DGNLSMRSWV CNSVPAMPED IIDVTLMEPE KTHFQEKLCC VSSILEVALH
1101: CTTESPNERL NMIEVLANIK KIKQEFLRK

Best Arabidopsis Sequence Match ( AT3G47090.1 )
(BLAST)

0001: MRLFLLLAFN ALMQLEAYGF TDESDRQALL EIKSQVSESK RDALSAWNNS FPLCSWKWVR CGRKHKRVTR LDLGGLQLGG VISPSIGNLS FLIYLDLSNN
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD64]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.