Factsheet for VIT_11s0052g00340.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 8
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0052g01430.t01	Wine grape	plasma membrane	70.29	46.66
VIT_08s0007g00850.t01	Wine grape	plasma membrane	46.59	28.61
PGSC0003DMT400073110	Potato	cytosol	45.62	24.89
VIT_18s0001g09550.t01	Wine grape	plasma membrane	33.93	24.05
VIT_18s0001g15800.t01	Wine grape	cytosol, peroxisome	15.1	17.32

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	ProteinID:CBI17888	ProteinID:CBI17888.3
ncoils:Coil	UniProt:D7SQF7	EMBL:FN594964	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464
GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675
InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069
PFAM:PF00560	PFAM:PF08263	PFAM:PF13855	PRINTS:PR00019	ScanProsite:PS00108	PFscan:PS50011
PFscan:PS51450	PANTHER:PTHR43887	PANTHER:PTHR43887:SF14	InterPro:Prot_kinase_dom	SMART:SM00220	SMART:SM00369
SUPFAM:SSF52058	SUPFAM:SSF56112	InterPro:Ser/Thr_kinase_AS	SignalP:SignalP-noTM	UniParc:UPI0001BE17D6	ArrayExpress:VIT_11s0052g00340
EnsemblPlantsGene:VIT_11s0052g00340	EnsemblPlants:VIT_11s0052g00340.t01	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr11:+:17655373..17658529

Molecular Weight (calculated)

68471.9 Da

IEP (calculated)

6.505

GRAVY (calculated)

0.020

Length

616 amino acids

Sequence
(BLAST)

001: MLMGRLFTVS LIGVLLLHSC TVSLALSSSN FTDLSALLAF KSEIKIDPNN ILGSNWTETE NFCNWVGVSC SRRRQRVTAL SLRNMGLQGT ISPHVGNLSF
101: LVKFDLYNNS FHGHLIPEIG HLRRLVVLNM HRNLMEGAIP TSLHQCQKLE GIDLHANNLT AGNIPLYISN CSQLKYIQLP LNQFSGPVPT SLGQLEHLQE
201: LDLEINQLTS QSDSLELSFL TSLTRCRSLE KLYISGNPLN GLLPVSIGNL SSSLQDFVAY SCQIKGPIPK EIGSLRNLNQ LDLSENNMTG SIPSTIKGMK
301: SLQSLSSLNL SHNSFWGPIP ESFRELITLD YMDLSHNNIS GSIPKSMVAL SHLQYLNLSF NNLSGEIPSE GPFANFTAAS FVENEALCGL PIFQGAFKSF
401: EAECKVLARV RHRNLVRVIS SCSNPELRAV VLQYMPNGSL EKWLYSHNYC LNLFQRVSIM VDVALALEYL HHGQSEPVVH CDLKPSNVLL DDDMVAHVGD
501: FGIAKILVEK KSTTQTKTLG TLGYIAPEYG LEGRVSTRGD IYSYGIMLLE MLTRKKPTDD MFVGEFYVVA AQDHLLEIME LGLECSKEFP EERIDIKDVV
601: VKLNKIKVQI IATHLE

Best Arabidopsis Sequence Match ( AT3G47090.1 )
(BLAST)

0001: MRLFLLLAFN ALMQLEAYGF TDESDRQALL EIKSQVSESK RDALSAWNNS FPLCSWKWVR CGRKHKRVTR LDLGGLQLGG VISPSIGNLS FLIYLDLSNN
0101: SFGGTIPQEM GNLFRLKYLA VGFNYLEGEI PASLSNCSRL LYLDLFSNNL GDGVPSELGS LRKLLYLYLG LNDLKGKFPV FIRNLTSLIV LNLGYNHLEG
0201: EIPDDIAMLS QMVSLTLTMN NFSGVFPPAF YNLSSLENLY LLGNGFSGNL KPDFGNLLPN IHELSLHGNF LTGAIPTTLA NISTLEMFGI GKNRMTGSIS
0301: PNFGKLENLH YLELANNSLG SYSFGDLAFL DALTNCSHLH GLSVSYNRLG GALPTSIVNM STELTVLNLK GNLIYGSIPH DIGNLIGLQS LLLADNLLTG
0401: PLPTSLGNLV GLGELILFSN RFSGEIPSFI GNLTQLVKLY LSNNSFEGIV PPSLGDCSHM LDLQIGYNKL NGTIPKEIMQ IPTLVHLNME SNSLSGSLPN
0501: DIGRLQNLVE LLLGNNNLSG HLPQTLGKCL SMEVIYLQEN HFDGTIPDIK GLMGVKNVDL SNNNLSGSIS EYFENFSKLE YLNLSDNNFE GRVPTEGIFQ
0601: NATLVSVFGN KNLCGSIKEL KLKPCIAQAP PVETRHPSLL KKVAIGVSVG IALLLLLFIV SLSWFKKRKN NQKINNSAPF TLEIFHEKLS YGDLRNATDG
0701: FSSSNIVGSG SFGTVFKALL QTENKIVAVK VLNMQRRGAM KSFMAECESL KDIRHRNLVK LLTACASIDF QGNEFRALIY EFMPNGSLDK WLHPEEVEEI
0801: HRPSRTLTLL ERLNIAIDVA SVLDYLHVHC HEPIAHCDLK PSNILLDDDL TAHVSDFGLA RLLLKFDQES FFNQLSSAGV RGTIGYAAPE YGMGGQPSIH
0901: GDVYSFGVLV LEMFTGKRPT NELFGGNFTL NSYTKAALPE RVLDIADKSI LHSGLRVGFP VLECLKGILD VGLRCCEESP LNRLATSEAA KELISIRERF
1001: FKTRRTARR

Arabidopsis Description

Leucine-rich repeat protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:Q9SD64]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.