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Sorghum
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d041995_P002 Maize mitochondrion 92.84 90.26
Zm00001d051210_P001 Maize mitochondrion 62.37 89.97
Zm00001d011796_P002 Maize mitochondrion 81.39 76.83
Os01t0966300-01 Rice mitochondrion 72.39 72.24
TraesCS3A01G516600.1 Wheat mitochondrion 73.01 70.83
GSMUA_Achr8P30450_001 Banana cytosol, mitochondrion, plastid 60.12 57.53
KXG31644 Sorghum mitochondrion 46.42 44.95
EER95286 Sorghum mitochondrion 27.61 25.47
EES01359 Sorghum mitochondrion 24.13 23.23
Protein Annotations
MapMan:18.10.2.2.1MapMan:2.4.3.3.1Gene3D:3.30.830.10UniProt:A0A1W0W1I3ncoils:CoilGO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0046872InterPro:Metalloenz_LuxS/M16EnsemblPlants:OQU88247ProteinID:OQU88247
ProteinID:OQU88247.1PFAM:PF00675PFAM:PF05193PANTHER:PTHR11851PANTHER:PTHR11851:SF157InterPro:Pept_M16_N
InterPro:Peptidase_M16_CEnsemblPlantsGene:SORBI_3003G440600SUPFAM:SSF63411UniParc:UPI0001A84CA6RefSeq:XP_002457003.1SEG:seg
Description
hypothetical protein
Coordinates
chr3:+:73959825..73963986
Molecular Weight (calculated)
53765.5 Da
IEP (calculated)
5.488
GRAVY (calculated)
-0.134
Length
489 amino acids
Sequence
(BLAST)
001: MLSRMLPRLR SSARVCGQEP AAAARRLSAA EAFAECEGSL LRPLPGLDLP PCLPDNLSRS PTRVTTLPNG LRIASEDIPG PSACIGFFVN SGSVYESGET
101: TGVSHMLERM AFKDTKHRSH LNIVHELELA GGNVGASASR EQMVYSYDTL KGYMPEALEI LIDCMRNPLF LQEEVERQLV LAREEVQELQ KNPERFLHEQ
201: LNLVGFSGAL ANPLIAPEDA LARINDKIIQ KFYSENFTAD RVVLAASGVD HEHLLGYADL LLKDWHKGTP IEKPKSTYVG GDSRHKADSD MTHVALAFEV
301: PGGWLQERDA TIMTVIQTLM GGGGSFSSGG PGKGMHSRLY LRVLNKYHSV ESFSAFSNVY DSSGLFGIYL TTPSDFVAKA VDIAISELVA VATPGEVTEV
401: ELQRAKNSTI SSVLMNLESR VVVAEDIGRQ MLSYGCRKPI DYFLQCMEEI TLDDVATFAR KMLASQPTMV SWGNVDKVPP YEFICKRLQ
Best Arabidopsis Sequence Match ( AT1G51980.1 )
(BLAST)
001: MYRTAASRAR ALKGVLTRSL RPARYASSSA VAETSSSTPA YLSWLSGGSR AALTSLDMPL QGVSLPPPLA DKVEPSKLQI TTLPNGLKIA SETTPNPAAS
101: IGLYVDCGSI YEAPYFHGAT HLLERMAFKS TLNRTHFRLV REIEAIGGNT SASASREQMS YTIDALKTYV PEMVEVLIDS VRNPAFLDWE VNEELRKMKV
201: EIAELAKNPM GFLLEAIHSA GYSGPLASPL YAPESALDRL NGELLEEFMT ENFTAARMVL AASGVEHEEL LKVAEPLTSD LPNVPPQLAP KSQYVGGDFR
301: QHTGGEATHF AVAFEVPGWN NEKEAVTATV LQMLMGGGGS FSAGGPGKGM HSWLYRRVLN EYQEVQSCTA FTSIFNDTGL FGIYGCSSPQ FAAKAIELAA
401: KELKDVAGGK VNQAHLDRAK AATKSAVLMN LESRMIAAED IGRQILTYGE RKPVDQFLKS VDQLTLKDIA DFTSKVISKP LTMGSFGDVL AVPSYDTISS
501: KFR
Arabidopsis Description
Probable mitochondrial-processing peptidase subunit alpha-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU25]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.