CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 8
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039505_P001	Maize	mitochondrion	93.27	93.27
Os01t0191500-01	Rice	mitochondrion	82.57	82.57
TraesCS3A01G107500.3	Wheat	golgi, nucleus	80.0	80.0
HORVU3Hr1G019540.2	Barley	plasma membrane	80.0	74.68
TraesCS3D01G109500.1	Wheat	plastid	80.4	73.02
TraesCS3B01G126300.1	Wheat	plastid	79.8	72.74
KRH41466	Soybean	cytosol, mitochondrion	18.02	60.67
KRH23379	Soybean	endoplasmic reticulum	58.42	60.08
KRH41465	Soybean	mitochondrion	42.57	60.06
KRH60182	Soybean	nucleus	60.59	59.88
VIT_09s0002g03200.t01	Wine grape	mitochondrion	59.8	59.68
VIT_11s0016g02870.t01	Wine grape	mitochondrion	59.6	59.49
KRH09954	Soybean	mitochondrion	57.82	59.47
KRH44259	Soybean	mitochondrion	58.61	58.61
KRH47194	Soybean	mitochondrion	58.61	58.61
Solyc12g008630.1.1	Tomato	plastid	56.44	56.55
PGSC0003DMT400000784	Potato	mitochondrion	56.04	56.15
Bra014305.1-P	Field mustard	mitochondrion	55.05	55.38
CDY22877	Canola	mitochondrion	55.25	55.36
CDY46536	Canola	mitochondrion	54.85	55.18
CDY33843	Canola	mitochondrion	54.85	55.18
Bra018939.1-P	Field mustard	mitochondrion	55.25	55.14
CDX87868	Canola	mitochondrion	54.85	54.96
CDY45641	Canola	mitochondrion	54.46	54.56
Bra030405.1-P	Field mustard	mitochondrion	54.46	54.56
AT3G16480.1	Thale cress	mitochondrion	53.86	54.51
CDY53441	Canola	mitochondrion	53.86	54.18
AT1G51980.1	Thale cress	mitochondrion	52.67	52.88
CDX92075	Canola	mitochondrion	50.49	51.52
Bra022162.1-P	Field mustard	mitochondrion	50.3	51.31
CDY43102	Canola	mitochondrion	49.9	51.01
KRG99915	Soybean	cytosol	8.91	48.39
CDY06399	Canola	mitochondrion	22.77	48.32
OQU88247	Sorghum	mitochondrion	44.95	46.42
KRH45936	Soybean	cytosol, mitochondrion, plastid	6.93	46.05
Solyc05g026150.1.1	Tomato	cytosol, extracellular, mitochondrion	14.85	46.01
KRH38482	Soybean	cytosol, plastid	7.72	44.32
KRH15783	Soybean	cytosol	27.72	39.22
EER95286	Sorghum	mitochondrion	26.93	25.66
EES01359	Sorghum	mitochondrion	23.37	23.23

Protein Annotations

EnsemblPlants:KXG31644	EnsemblPlantsGene:SORBI_3003G034900	EntrezGene:8078733	Gene3D:3.30.830.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0046872	InterPro:Metalloenz_LuxS/M16	InterPro:Pept_M16_N	InterPro:Peptidase_M16_C	PANTHER:PTHR11851
PANTHER:PTHR11851:SF138	PFAM:PF00675	PFAM:PF05193	ProteinID:KXG31644	ProteinID:KXG31644.2	RefSeq:XP_002457199.1
SUPFAM:SSF63411	UniParc:UPI0001A84F73	UniProt:A0A1B6Q140	MapMan:2.4.3.3.1	MapMan:18.10.2.2.1	:

Description

hypothetical protein

Coordinates

chr3:-:3195611..3200675

Molecular Weight (calculated)

53862.1 Da

IEP (calculated)

6.683

GRAVY (calculated)

-0.087

Length

505 amino acids

Sequence
(BLAST)

001: MYRVASGLGA LKRHGADAQM MNVAIRCAST SVAQGSSGGF WTWLTGARSN EIPPPDFALP GVTIPPPLPD HVEAGKTIVT TLPNGVKIAS ETSAGSSCSV
101: GVYVDCGSVY EAPETTGASQ LVKTMAFATT ANRSELRVVR EIDAIGGTAK ASASREMMSY TYRALKTYMP EMVEVLIDCV RNPAFLDWEV KEQILRLKAE
201: LVKSSSNPEK FLLEALHSTG YSGALANPLI ASEYAISRLN SDVLEQFIIE NYTAPRIVLA ASGVDHEELV SIAGPLLSDI PSVSGTTRPK STYIGGEYKK
301: SADSSNTDVA LAFEVPSGWL KEKDFVTASV LQTLLGGGGK FSWGRQGKGL HSRLNHLVNE FDQIKSISAF KDVHSNTGIF GIHTSTDASF VPKAIDLAAR
401: ELTSLATPGQ VDQSQLDRAK ASAKSAILAN LESQASLTED MGRQVLAFGE RKPAEHLLKA IDGVTLKDVT SVAEKIISSP LTMASHGNVL NMPTYESVSG
501: KFRSK

Best Arabidopsis Sequence Match ( AT1G51980.1 )
(BLAST)

001: MYRTAASRAR ALKGVLTRSL RPARYASSSA VAETSSSTPA YLSWLSGGSR AALTSLDMPL QGVSLPPPLA DKVEPSKLQI TTLPNGLKIA SETTPNPAAS
101: IGLYVDCGSI YEAPYFHGAT HLLERMAFKS TLNRTHFRLV REIEAIGGNT SASASREQMS YTIDALKTYV PEMVEVLIDS VRNPAFLDWE VNEELRKMKV
201: EIAELAKNPM GFLLEAIHSA GYSGPLASPL YAPESALDRL NGELLEEFMT ENFTAARMVL AASGVEHEEL LKVAEPLTSD LPNVPPQLAP KSQYVGGDFR
301: QHTGGEATHF AVAFEVPGWN NEKEAVTATV LQMLMGGGGS FSAGGPGKGM HSWLYRRVLN EYQEVQSCTA FTSIFNDTGL FGIYGCSSPQ FAAKAIELAA
401: KELKDVAGGK VNQAHLDRAK AATKSAVLMN LESRMIAAED IGRQILTYGE RKPVDQFLKS VDQLTLKDIA DFTSKVISKP LTMGSFGDVL AVPSYDTISS
501: KFR

Arabidopsis Description

Probable mitochondrial-processing peptidase subunit alpha-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU25]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.