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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 8
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
EpiLoc:mitochondrion
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:mitochondrion
 mitochondrion: 17383966
mitochondrion: 15069638
mitochondrion: 15258153
mitochondrion: 16429260
mitochondrion: 16443157
plastid: 17189339
mitochondrion: 19010998
plastid: 21433289
mitochondrion: 23027867
plasma membrane: 27800704
plastid: 27992503
gfp PMID: 17383966 doi
KA Howell, K Cheng, MW Murcha, LE Jenkin, AH Millar, J Whelan
Australian Research Council Centre of Excellence in Plant Energy Biology, University of Western Australia, Perth, Western Australia 6009, Australia.
msms PMID: 15258153 doi
AH Millar, AE Trend, JL Heazlewood
Plant Molecular Biology Group, School of Biomedical and Chemical Sciences, the University of Western Australia, Crawley 6009, Western Australia, Australia.
msms PMID: 23027867 doi
G Liu, H Tian, YQ Huang, J Hu, YX Ji, SQ Li, YQ Feng, L Guo, YG Zhu
State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan 430072, China.
msms PMID: 16443157 doi
IM Møller, BK Kristensen
Department of Agricultural Sciences, The Royal Veterinary and Agricultural University, Thorvaldsensvej 40, DK-1871 Frederiksberg C, Denmark.
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 16429260 doi
KA Howell, AH Millar, J Whelan
ARC Centre of Excellence in Plant Energy Biology, CMS Building M310, University of Western Australia, 35 Stirling Hwy, Perth, WA 6009, Australia.
msms PMID: 15069638 doi
N Tanaka, M Fujita, H Handa, S Murayama, M Uemura, Y Kawamura, T Mitsui, S Mikami, Y Tozawa, T Yoshinaga, S Komatsu
Department of Molecular Genetics, National Institute of Agrobiological Sciences, 305-8602, Tsukuba, Japan.
msms PMID: 19010998 doi
S Huang, NL Taylor, R Narsai, H Eubel, J Whelan, AH Millar
Australian Research Council Centre of Excellence in Plant Energy Biology, M316, University of Western Australia, Crawley, 6009 Western Australia, Australia.
msms PMID: 27992503 doi
S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
msms PMID: 21433289 doi
S Reiland, J Grossmann, K Baerenfaller, P Gehrig, A Nunes-Nesi, AR Fernie, W Gruissem, S Baginsky
Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.
msms PMID: 17189339 doi
T Kleffmann, A von Zychlinski, D Russenberger, M Hirsch-Hoffmann, P Gehrig, W Gruissem, S Baginsky
Institute of Plant Sciences, Eidgenössische Technische Hochschule Zurich, 8092 Zurich, Switzerland.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d039505_P001 Maize mitochondrion 82.97 82.97
TraesCS3A01G107500.3 Wheat golgi, nucleus 82.57 82.57
KXG31644 Sorghum mitochondrion 82.57 82.57
HORVU3Hr1G019540.2 Barley plasma membrane 82.38 76.89
TraesCS3B01G126300.1 Wheat plastid 82.57 75.27
TraesCS3D01G109500.1 Wheat plastid 82.38 74.82
VIT_09s0002g03200.t01 Wine grape mitochondrion 61.58 61.46
KRH41466 Soybean cytosol, mitochondrion 18.22 61.33
KRH09954 Soybean mitochondrion 59.6 61.3
Os01t0739000-01 Rice mitochondrion 60.4 61.12
KRH23379 Soybean endoplasmic reticulum 59.21 60.9
VIT_11s0016g02870.t01 Wine grape mitochondrion 60.79 60.67
Os05t0524300-01 Rice mitochondrion, plastid 59.21 60.53
KRH60182 Soybean nucleus 61.19 60.47
KRH44259 Soybean mitochondrion 60.4 60.4
KRH41465 Soybean mitochondrion 42.77 60.34
KRH47194 Soybean mitochondrion 59.8 59.8
Bra014305.1-P Field mustard mitochondrion 57.82 58.17
CDY46536 Canola mitochondrion 57.43 57.77
Bra030405.1-P Field mustard mitochondrion 57.62 57.74
CDX87868 Canola mitochondrion 57.62 57.74
CDY33843 Canola mitochondrion 57.23 57.57
CDY45641 Canola mitochondrion 57.43 57.54
CDY22877 Canola mitochondrion 57.43 57.54
Bra018939.1-P Field mustard mitochondrion 57.62 57.51
CDY53441 Canola mitochondrion 56.63 56.97
Solyc12g008630.1.1 Tomato plastid 56.83 56.94
PGSC0003DMT400000784 Potato mitochondrion 56.83 56.94
AT3G16480.1 Thale cress mitochondrion 55.84 56.51
AT1G51980.1 Thale cress mitochondrion 55.84 56.06
CDX92075 Canola mitochondrion 51.88 52.93
Bra022162.1-P Field mustard mitochondrion 51.68 52.73
CDY43102 Canola mitochondrion 51.49 52.63
Solyc05g026150.1.1 Tomato cytosol, extracellular, mitochondrion 15.84 49.08
CDY06399 Canola mitochondrion 22.77 48.32
Os01t0966300-01 Rice mitochondrion 46.14 47.55
KRG99915 Soybean cytosol 8.71 47.31
KRH45936 Soybean cytosol, mitochondrion, plastid 6.73 44.74
KRH38482 Soybean cytosol, plastid 7.33 42.05
KRH15783 Soybean cytosol 27.33 38.66
Os01t0711100-01 Rice mitochondrion 9.11 24.86
Os03t0212700-01 Rice mitochondrion 24.36 23.08
Protein Annotations
MapMan:18.10.2.2.1MapMan:2.4.3.3.1Gene3D:3.30.830.10EntrezGene:4327300EMBL:AK071930ProteinID:BAD72225.1
ProteinID:BAF04186.1ProteinID:BAS70825.1ProteinID:EAZ10865.1GO:GO:0003674GO:GO:0003824GO:GO:0004222
GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005739
GO:GO:0005743GO:GO:0006627GO:GO:0006810GO:GO:0008150GO:GO:0008152GO:GO:0008270
GO:GO:0009987GO:GO:0016020GO:GO:0016043GO:GO:0016787GO:GO:0019538GO:GO:0046872
InterPro:Metalloenz_LuxS/M16EnsemblPlantsGene:Os01g0191500EnsemblPlants:Os01t0191500-01PFAM:PF00675PFAM:PF05193PANTHER:PTHR11851
PANTHER:PTHR11851:SF138InterPro:Pept_M16_NInterPro:Peptidase_M16_CUniProt:Q5SNJ4SUPFAM:SSF63411UniParc:UPI000046D44F
RefSeq:XP_015615076.1:::::
Description
Similar to Mitochondrial processing peptidase. (Os01t0191500-01)
Coordinates
chr1:+:4891518..4896876
Molecular Weight (calculated)
53949.5 Da
IEP (calculated)
7.152
GRAVY (calculated)
-0.099
Length
505 amino acids
Sequence
(BLAST)
001: MYRAASGLGA IKRHGLDGQM LNVAIRCAST SVAQRSSGGF WTWLTGARSN ALPPPDFTLP GVTIPPPLPD LVEPGKTKIT TLANGVKIAS ETTPGPSCSV
101: GVYVNCGSVH EAPETLGATQ LLKKMAYTTT TNRSHLRVVR EIEAVGGNVK ASANREMMSY SYAALKTYMP EMVEVLIDCV RNPAFLDWEV KEQIMKLKAE
201: LAEASSNPET FLLEALHSTG YSGALATPLI ASESSVSRLN TNVLEYFLAE NYTAPRIVLA ATGVDHDELV SIAEPLLSDM PGVTGPAKPK STYVGGEYRR
301: TADSSNTDVA LAFEVPGGWL KEKEFVTVSV LQTLLGGGGT YSWGRHGKGL HSSLNHLANE FDQIRSIAAF KDVHSNTGIF GIHTSTDAAF VPKAIDLATR
401: ELTSLATPGK VDQTQLDRAK ATAKSAILMN LESKASATED MGRQILAFGE RKPVEHLLKA VDGVTLKDIT ALAEKIISSP LTMASHGNVL NVPTYDSVSG
501: KFRSK
Best Arabidopsis Sequence Match ( AT1G51980.1 )
(BLAST)
001: MYRTAASRAR ALKGVLTRSL RPARYASSSA VAETSSSTPA YLSWLSGGSR AALTSLDMPL QGVSLPPPLA DKVEPSKLQI TTLPNGLKIA SETTPNPAAS
101: IGLYVDCGSI YEAPYFHGAT HLLERMAFKS TLNRTHFRLV REIEAIGGNT SASASREQMS YTIDALKTYV PEMVEVLIDS VRNPAFLDWE VNEELRKMKV
201: EIAELAKNPM GFLLEAIHSA GYSGPLASPL YAPESALDRL NGELLEEFMT ENFTAARMVL AASGVEHEEL LKVAEPLTSD LPNVPPQLAP KSQYVGGDFR
301: QHTGGEATHF AVAFEVPGWN NEKEAVTATV LQMLMGGGGS FSAGGPGKGM HSWLYRRVLN EYQEVQSCTA FTSIFNDTGL FGIYGCSSPQ FAAKAIELAA
401: KELKDVAGGK VNQAHLDRAK AATKSAVLMN LESRMIAAED IGRQILTYGE RKPVDQFLKS VDQLTLKDIA DFTSKVISKP LTMGSFGDVL AVPSYDTISS
501: KFR
Arabidopsis Description
Probable mitochondrial-processing peptidase subunit alpha-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU25]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.