Factsheet for TraesCS3B01G126300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G107500.3	Wheat	golgi, nucleus	88.81	97.43
TraesCS3D01G109500.1	Wheat	plastid	96.93	96.58
HORVU3Hr1G019540.2	Barley	plasma membrane	91.88	94.08
Os01t0191500-01	Rice	mitochondrion	75.27	82.57
Zm00001d039505_P001	Maize	mitochondrion	72.92	80.0
KXG31644	Sorghum	mitochondrion	72.74	79.8
VIT_09s0002g03200.t01	Wine grape	mitochondrion	55.42	60.67
TraesCS1B01G356900.1	Wheat	golgi	54.33	60.32
KRH23379	Soybean	endoplasmic reticulum	53.43	60.29
KRH09954	Soybean	mitochondrion	53.43	60.29
KRH44259	Soybean	mitochondrion	54.87	60.2
KRH41465	Soybean	mitochondrion	38.81	60.06
KRH47194	Soybean	mitochondrion	54.33	59.6
VIT_11s0016g02870.t01	Wine grape	mitochondrion	54.33	59.49
KRH60182	Soybean	nucleus	54.15	58.71
KRH41466	Soybean	cytosol, mitochondrion	15.52	57.33
TraesCS3B01G311800.1	Wheat	mitochondrion	51.44	57.11
Bra014305.1-P	Field mustard	mitochondrion	50.54	55.78
CDY46536	Canola	mitochondrion	50.18	55.38
CDY33843	Canola	mitochondrion	50.18	55.38
Solyc12g008630.1.1	Tomato	plastid	50.36	55.36
CDY22877	Canola	mitochondrion	50.36	55.36
Bra030405.1-P	Field mustard	mitochondrion	50.18	55.16
Bra018939.1-P	Field mustard	mitochondrion	50.36	55.14
CDX87868	Canola	mitochondrion	50.0	54.96
CDY45641	Canola	mitochondrion	50.0	54.96
CDY53441	Canola	mitochondrion	49.46	54.58
PGSC0003DMT400000784	Potato	mitochondrion	49.64	54.56
AT3G16480.1	Thale cress	mitochondrion	48.56	53.91
AT1G51980.1	Thale cress	mitochondrion	48.19	53.08
CDX92075	Canola	mitochondrion	45.85	51.31
Bra022162.1-P	Field mustard	mitochondrion	45.67	51.11
CDY43102	Canola	mitochondrion	45.49	51.01
Solyc05g026150.1.1	Tomato	cytosol, extracellular, mitochondrion	14.62	49.69
CDY06399	Canola	mitochondrion	20.94	48.74
KRG99915	Soybean	cytosol	7.94	47.31
KRH45936	Soybean	cytosol, mitochondrion, plastid	6.32	46.05
KRH38482	Soybean	cytosol, plastid	6.5	40.91
KRH15783	Soybean	cytosol	25.27	39.22
TraesCS4B01G248700.2	Wheat	golgi, mitochondrion	23.29	24.34
TraesCS3B01G279900.1	Wheat	mitochondrion	20.94	23.06

Protein Annotations

EnsemblPlants:TraesCS3B01G126300.1	EnsemblPlantsGene:TraesCS3B01G126300	Gene3D:3.30.830.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0046872	InterPro:Metalloenz_LuxS/M16	InterPro:Pept_M16_N	InterPro:Peptidase_M16_C	PANTHER:PTHR11851	PANTHER:PTHR11851:SF138
PFAM:PF00675	PFAM:PF05193	SEG:seg	SUPFAM:SSF63411	MapMan:2.4.3.3.1	MapMan:18.10.2.2.1

Description

No Description!

Coordinates

chr3B:+:102752079..102757382

Molecular Weight (calculated)

58547.0 Da

IEP (calculated)

8.562

GRAVY (calculated)

-0.045

Length

554 amino acids

Sequence
(BLAST)

001: MSPTSICATS LSRIVAFHLS HGLRPHLPLR RSRRAAGDVP VDRSSQASSI MYRAASGLGA LKHGADTQLL NIAVRSASTS IAQRSSGGFL GWLTGARSNA
101: LPPPDFALPG VTIPPPLADH VEPGKTKITT LSNGVKIASE TSPGSACSVG VYVNCGSVYE TPETLGATQL LKKLAFTTTR NRSQLRVVRE IGAIGGSAKA
201: SANRELMSYS YGALKTYMPE MVEVLVDCVR NPALLDWEVK EEIMKLKAEL AEASSNPEAF LLDALHSSGY SGALANPLIA SEASVSRLNT DVLEEFLALN
301: YTSPRIVLAA SGVDHDELVS IAEPLLSDIP TATGTGKPKS VYVGGEYRRA ADSSNTDLAL AFELPGGWLK EKEFATASVL QALLGGGGVF TWGRPGKGLH
401: SRLNPLVNEF DQIKSISAFK NVHSNTGIFG IHASTEAAFV PKVIDLAARE LTSLATPGQV DQTQLDRAKA SAKSVILKNL ESKASTTEDM GRQALAFGER
501: KPVEQLLKAV DGITLADVSS VAEKIISSPL TMASHGNVIN VPAYETVRGK FSSK

Best Arabidopsis Sequence Match ( AT1G51980.1 )
(BLAST)

001: MYRTAASRAR ALKGVLTRSL RPARYASSSA VAETSSSTPA YLSWLSGGSR AALTSLDMPL QGVSLPPPLA DKVEPSKLQI TTLPNGLKIA SETTPNPAAS
101: IGLYVDCGSI YEAPYFHGAT HLLERMAFKS TLNRTHFRLV REIEAIGGNT SASASREQMS YTIDALKTYV PEMVEVLIDS VRNPAFLDWE VNEELRKMKV
201: EIAELAKNPM GFLLEAIHSA GYSGPLASPL YAPESALDRL NGELLEEFMT ENFTAARMVL AASGVEHEEL LKVAEPLTSD LPNVPPQLAP KSQYVGGDFR
301: QHTGGEATHF AVAFEVPGWN NEKEAVTATV LQMLMGGGGS FSAGGPGKGM HSWLYRRVLN EYQEVQSCTA FTSIFNDTGL FGIYGCSSPQ FAAKAIELAA
401: KELKDVAGGK VNQAHLDRAK AATKSAVLMN LESRMIAAED IGRQILTYGE RKPVDQFLKS VDQLTLKDIA DFTSKVISKP LTMGSFGDVL AVPSYDTISS
501: KFR

Arabidopsis Description

Probable mitochondrial-processing peptidase subunit alpha-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU25]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.