Factsheet for TraesCS3D01G109500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G107500.3	Wheat	golgi, nucleus	89.21	98.22
TraesCS3B01G126300.1	Wheat	plastid	96.58	96.93
HORVU3Hr1G019540.2	Barley	plasma membrane	91.55	94.08
Os01t0191500-01	Rice	mitochondrion	74.82	82.38
KXG31644	Sorghum	mitochondrion	73.02	80.4
Zm00001d039505_P001	Maize	mitochondrion	72.66	80.0
VIT_09s0002g03200.t01	Wine grape	mitochondrion	55.76	61.26
TraesCS1D01G346100.1	Wheat	mitochondrion	54.86	61.12
KRH44259	Soybean	mitochondrion	55.04	60.59
KRH09954	Soybean	mitochondrion	53.42	60.49
KRH23379	Soybean	endoplasmic reticulum	53.42	60.49
KRH41465	Soybean	mitochondrion	38.85	60.34
KRH47194	Soybean	mitochondrion	54.5	60.0
VIT_11s0016g02870.t01	Wine grape	mitochondrion	54.32	59.68
KRH41466	Soybean	cytosol, mitochondrion	16.01	59.33
KRH60182	Soybean	nucleus	54.32	59.1
TraesCS3D01G277900.1	Wheat	mitochondrion	50.9	56.71
Bra014305.1-P	Field mustard	mitochondrion	51.08	56.57
CDY46536	Canola	mitochondrion	50.72	56.18
CDY33843	Canola	mitochondrion	50.72	56.18
CDY22877	Canola	mitochondrion	50.9	56.15
Solyc12g008630.1.1	Tomato	plastid	50.9	56.15
Bra030405.1-P	Field mustard	mitochondrion	50.72	55.95
Bra018939.1-P	Field mustard	mitochondrion	50.9	55.93
CDY45641	Canola	mitochondrion	50.54	55.75
CDX87868	Canola	mitochondrion	50.54	55.75
CDY53441	Canola	mitochondrion	50.0	55.38
PGSC0003DMT400000784	Potato	mitochondrion	50.18	55.36
AT3G16480.1	Thale cress	mitochondrion	49.28	54.91
AT1G51980.1	Thale cress	mitochondrion	48.92	54.08
CDX92075	Canola	mitochondrion	46.4	52.12
Bra022162.1-P	Field mustard	mitochondrion	46.22	51.92
CDY43102	Canola	mitochondrion	46.04	51.82
CDY06399	Canola	mitochondrion	20.86	48.74
Solyc05g026150.1.1	Tomato	cytosol, extracellular, mitochondrion	14.21	48.47
KRH45936	Soybean	cytosol, mitochondrion, plastid	6.47	47.37
KRG99915	Soybean	cytosol	7.91	47.31
KRH38482	Soybean	cytosol, plastid	6.65	42.05
KRH15783	Soybean	cytosol	25.36	39.5
TraesCS4D01G248100.2	Wheat	golgi, mitochondrion	22.84	23.92
TraesCS3D01G250800.2	Wheat	mitochondrion	20.68	22.86

Protein Annotations

EnsemblPlants:TraesCS3D01G109500.1	EnsemblPlantsGene:TraesCS3D01G109500	Gene3D:3.30.830.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0046872	InterPro:Metalloenz_LuxS/M16	InterPro:Pept_M16_N	InterPro:Peptidase_M16_C	PANTHER:PTHR11851	PANTHER:PTHR11851:SF138
PFAM:PF00675	PFAM:PF05193	SEG:seg	SUPFAM:SSF63411	MapMan:2.4.3.3.1	MapMan:18.10.2.2.1

Description

No Description!

Coordinates

chr3D:+:63354161..63358774

Molecular Weight (calculated)

58762.2 Da

IEP (calculated)

8.564

GRAVY (calculated)

-0.059

Length

556 amino acids

Sequence
(BLAST)

001: MSPTSICASA TSLTRIVAFH LSHGLRPHLP LRRFRRAAGD DPVDRSPPAP STMYRAASGL GALKHGADTQ LLNIAVRSAS TSVAQRSSGG FLGWLTGARS
101: NALPPPDFAL PGVTIPPPLA DHVEPGKTKI TTLSNGVKIA SETSPGSACS VGVYVHCGSV YETPETLGAT QLLKKLAFTT TRNRSQLRVV REIGAIGGSA
201: KASANRELMS YSYGALKTYM PEMVEVLVDC VRNPALLDWE VKEEIMKLKA ELAEASSNPE AFLLDALHSS GYSGALANPL IASEASISRL NTDVLEEFLA
301: LNYTSPRIVL AASGVDHNEL VSIAEPLLSD IPTATGTGKP KSVYVGGEYR RAADSSNTDL ALAFELPGGW LKEKEFATAS VLQALLGGGG VFTWGRPGKG
401: LHSRLNPLVN EFDQIKSISA FKNVHSNTGI FGIHTSTEAA FVPKVIDLAA RELTSLATPG QVDQAQLDRA KASAKSAILK NLESKASTTE DIGRQALAFG
501: ERKPVEQLLK AVDGITLADV STVAEKIISS PLTMASHGNV LNVPAYETVR GKFSSK

Best Arabidopsis Sequence Match ( AT1G51980.1 )
(BLAST)

001: MYRTAASRAR ALKGVLTRSL RPARYASSSA VAETSSSTPA YLSWLSGGSR AALTSLDMPL QGVSLPPPLA DKVEPSKLQI TTLPNGLKIA SETTPNPAAS
101: IGLYVDCGSI YEAPYFHGAT HLLERMAFKS TLNRTHFRLV REIEAIGGNT SASASREQMS YTIDALKTYV PEMVEVLIDS VRNPAFLDWE VNEELRKMKV
201: EIAELAKNPM GFLLEAIHSA GYSGPLASPL YAPESALDRL NGELLEEFMT ENFTAARMVL AASGVEHEEL LKVAEPLTSD LPNVPPQLAP KSQYVGGDFR
301: QHTGGEATHF AVAFEVPGWN NEKEAVTATV LQMLMGGGGS FSAGGPGKGM HSWLYRRVLN EYQEVQSCTA FTSIFNDTGL FGIYGCSSPQ FAAKAIELAA
401: KELKDVAGGK VNQAHLDRAK AATKSAVLMN LESRMIAAED IGRQILTYGE RKPVDQFLKS VDQLTLKDIA DFTSKVISKP LTMGSFGDVL AVPSYDTISS
501: KFR

Arabidopsis Description

Probable mitochondrial-processing peptidase subunit alpha-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU25]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.