Factsheet for VIT_09s0002g03200.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_09s0054g00530.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G51980.1	VIT_09s0054g00530.t01	AT3G21150.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0016g02870.t01	Wine grape	mitochondrion	83.2	83.2
KRH44259	Soybean	mitochondrion	82.02	82.18
KRH09954	Soybean	mitochondrion	79.64	82.08
GSMUA_Achr9P00130_001	Banana	mitochondrion	80.83	81.8
KRH47194	Soybean	mitochondrion	81.62	81.78
KRH23379	Soybean	endoplasmic reticulum	78.26	80.65
GSMUA_Achr7P13650_001	Banana	mitochondrion	79.64	79.49
Os01t0739000-01	Rice	mitochondrion	74.11	75.15
TraesCS1D01G346100.1	Wheat	mitochondrion	72.53	73.55
TraesCS1B01G356900.1	Wheat	golgi	72.53	73.55
Zm00001d025260_P001	Maize	mitochondrion	30.04	73.43
CDY45641	Canola	mitochondrion	71.54	71.83
Bra030405.1-P	Field mustard	mitochondrion	71.54	71.83
CDX87868	Canola	mitochondrion	71.34	71.63
Os05t0524300-01	Rice	mitochondrion, plastid	69.57	71.26
CDY46536	Canola	mitochondrion	70.55	71.12
Bra014305.1-P	Field mustard	mitochondrion	70.55	71.12
CDY22877	Canola	mitochondrion	70.75	71.03
CDY33843	Canola	mitochondrion	70.36	70.92
Bra018939.1-P	Field mustard	mitochondrion	70.75	70.75
CDY53441	Canola	mitochondrion	70.16	70.72
Zm00001d038776_P001	Maize	mitochondrion	72.92	69.89
AT3G16480.1	Thale cress	mitochondrion	68.58	69.54
AT1G51980.1	Thale cress	mitochondrion	68.58	68.99
HORVU1Hr1G075540.3	Barley	mitochondrion	72.53	68.34
TraesCS3B01G311800.1	Wheat	mitochondrion	67.0	67.94
TraesCS3D01G277900.1	Wheat	mitochondrion	66.8	67.74
CDX92075	Canola	mitochondrion	65.02	66.46
CDY43102	Canola	mitochondrion	64.62	66.19
Bra022162.1-P	Field mustard	mitochondrion	64.62	66.06
CDY06399	Canola	mitochondrion	30.04	63.87
Os01t0191500-01	Rice	mitochondrion	61.46	61.58
TraesCS3A01G107500.3	Wheat	golgi, nucleus	60.87	60.99
TraesCS3A01G277600.1	Wheat	mitochondrion	67.19	60.18
Zm00001d039505_P001	Maize	mitochondrion	59.68	59.8
KXG31644	Sorghum	mitochondrion	59.68	59.8
HORVU3Hr1G019540.2	Barley	plasma membrane	60.28	56.38
TraesCS3D01G109500.1	Wheat	plastid	61.26	55.76
TraesCS3B01G126300.1	Wheat	plastid	60.67	55.42
KRH45936	Soybean	cytosol, mitochondrion, plastid	7.91	52.63
KRH38482	Soybean	cytosol, plastid	8.89	51.14
VIT_14s0108g01650.t01	Wine grape	plastid	26.68	27.05
VIT_01s0011g00740.t01	Wine grape	plastid	24.7	22.08

Protein Annotations

EntrezGene:100259973	wikigene:100259973	MapMan:18.10.2.2.1	MapMan:2.4.3.3.1	Gene3D:3.30.830.10	ProteinID:CBI36036
ProteinID:CBI36036.3	UniProt:D7U090	EMBL:FN596494	GO:GO:0003674	GO:GO:0003824	GO:GO:0004222
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0006508	GO:GO:0006627	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0016787	GO:GO:0019538
GO:GO:0046872	EntrezGene:LOC100259973	wikigene:LOC100259973	MEROPS:M16.985	InterPro:Metalloenz_LuxS/M16	PFAM:PF00675
PFAM:PF05193	ScanProsite:PS00143	PANTHER:PTHR11851	PANTHER:PTHR11851:SF157	InterPro:Pept_M16_N	InterPro:Pept_M16_Zn_BS
InterPro:Peptidase_M16_C	SUPFAM:SSF63411	TIGR:TC55464	TIGR:TC56099	UniParc:UPI00015C916E	ArrayExpress:VIT_09s0002g03200
EnsemblPlantsGene:VIT_09s0002g03200	EnsemblPlants:VIT_09s0002g03200.t01	unigene:Vvi.678	RefSeq:XP_002283426	RefSeq:XP_002283426.1	SEG:seg

Description

No Description!

Coordinates

chr9:+:2946729..2952046

Molecular Weight (calculated)

54772.3 Da

IEP (calculated)

6.363

GRAVY (calculated)

-0.086

Length

506 amino acids

Sequence
(BLAST)

001: MYRTAASRLR ALKGRGGNWR AARFASSSAV TVRSSSSPSL FSWLTGEKSS SLSPLNLPLA GVSLPPPLPD YVEPSKTKIT TLSNGVKIAS ETSPNPAASI
101: GFYVDCGSIY ETPLSFGATH LLERMAFKST TNRSHLRVVR EVEAIGGNVT ASASREQMGY TFDALKTYVP EMVELLVDCV RNPVFLDWEV NEQLQKVKAE
201: LGELSNNPQG LLLEAIHSAG YSGALANPLL APESAINRLN STILEEFVAE NYTAPRMVLA ASGVEHEEFL SIAEPLVSYL PSVPRPEEPK SVYVGGDYRC
301: QADSGITHLA LAFEVPGGWH NEKEAITLTV LQMLMGGGGS FSAGGPGKGM HSRLYLRVLN EYQQLQSFSA FNNIFNNTGI FGIYASTGSD FVAKAVDIAA
401: GELLSIASPG QVDQVQLTRA KEATKSAVLM NLESRMIASE DIGRQILTYG ERKPLEHFLK AVDEITLKDI TTIAQRIISS PLTMASYGDV IHVPSYESVN
501: RKFHAK

Best Arabidopsis Sequence Match ( AT1G51980.1 )
(BLAST)

001: MYRTAASRAR ALKGVLTRSL RPARYASSSA VAETSSSTPA YLSWLSGGSR AALTSLDMPL QGVSLPPPLA DKVEPSKLQI TTLPNGLKIA SETTPNPAAS
101: IGLYVDCGSI YEAPYFHGAT HLLERMAFKS TLNRTHFRLV REIEAIGGNT SASASREQMS YTIDALKTYV PEMVEVLIDS VRNPAFLDWE VNEELRKMKV
201: EIAELAKNPM GFLLEAIHSA GYSGPLASPL YAPESALDRL NGELLEEFMT ENFTAARMVL AASGVEHEEL LKVAEPLTSD LPNVPPQLAP KSQYVGGDFR
301: QHTGGEATHF AVAFEVPGWN NEKEAVTATV LQMLMGGGGS FSAGGPGKGM HSWLYRRVLN EYQEVQSCTA FTSIFNDTGL FGIYGCSSPQ FAAKAIELAA
401: KELKDVAGGK VNQAHLDRAK AATKSAVLMN LESRMIAAED IGRQILTYGE RKPVDQFLKS VDQLTLKDIA DFTSKVISKP LTMGSFGDVL AVPSYDTISS
501: KFR

Arabidopsis Description

Probable mitochondrial-processing peptidase subunit alpha-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU25]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.