Factsheet for HORVU3Hr1G019540.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	mitochondrion

plasma membrane: 29385242

msms PMID: 29385242 doi

K Witzel, A Matros, ALB Møller, E Ramireddy, C Finnie, M Peukert, T Rutten, A Herzog, G Kunze, M Melzer, S Kaspar-Schoenefeld, T Schmülling, B Svensson, HP Mock

Biosystems Engineering, Fraunhofer Institute for Factory Operation and Automation, Joseph-von-Fraunhofer-Straße 1, 39106, Magdeburg, Germany., Institute of Biology/Applied Genetics, Dahlem Centre of Plant Sciences, Free University of Berlin, Albrecht-Thaer-Weg 6, 14195, Berlin, Germany., Leibniz Institute of Plant Genetics and Crop Plant Research, Corrensstraße 3, 06466, Stadt Seeland, Gatersleben, Germany., Leibniz Institute of Vegetable and Ornamental Crops, Theodor-Echtermeyer-Weg 1, 14979, Großbeeren, Germany., Technical University of Denmark, Søltofts Plads, Building 224, 2800, Kongens Lyngby, Denmark.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G107500.3	Wheat	golgi, nucleus	89.09	95.45
TraesCS3B01G126300.1	Wheat	plastid	94.08	91.88
TraesCS3D01G109500.1	Wheat	plastid	94.08	91.55
Os01t0191500-01	Rice	mitochondrion	76.89	82.38
KXG31644	Sorghum	mitochondrion	74.68	80.0
Zm00001d039505_P001	Maize	mitochondrion	74.31	79.6
KRH41465	Soybean	mitochondrion	39.93	60.34
VIT_09s0002g03200.t01	Wine grape	mitochondrion	56.38	60.28
KRH09954	Soybean	mitochondrion	53.97	59.47
KRH23379	Soybean	endoplasmic reticulum	53.79	59.27
KRH44259	Soybean	mitochondrion	55.08	59.01
KRH47194	Soybean	mitochondrion	54.9	58.81
VIT_11s0016g02870.t01	Wine grape	mitochondrion	54.9	58.7
KRH60182	Soybean	nucleus	55.27	58.51
HORVU1Hr1G075540.3	Barley	mitochondrion	56.93	57.36
KRH41466	Soybean	cytosol, mitochondrion	15.71	56.67
Bra014305.1-P	Field mustard	mitochondrion	51.94	55.98
CDY46536	Canola	mitochondrion	51.57	55.58
CDY22877	Canola	mitochondrion	51.57	55.36
CDY33843	Canola	mitochondrion	51.2	55.18
Bra030405.1-P	Field mustard	mitochondrion	51.39	55.16
Solyc12g008630.1.1	Tomato	plastid	51.39	55.16
CDX87868	Canola	mitochondrion	51.39	55.16
Bra018939.1-P	Field mustard	mitochondrion	51.57	55.14
CDY45641	Canola	mitochondrion	51.2	54.96
CDY53441	Canola	mitochondrion	50.83	54.78
PGSC0003DMT400000784	Potato	mitochondrion	50.65	54.37
AT3G16480.1	Thale cress	mitochondrion	49.91	54.11
AT1G51980.1	Thale cress	mitochondrion	49.72	53.48
CDX92075	Canola	mitochondrion	47.13	51.52
Bra022162.1-P	Field mustard	mitochondrion	46.95	51.31
CDY43102	Canola	mitochondrion	46.77	51.21
CDY06399	Canola	mitochondrion	21.63	49.16
Solyc05g026150.1.1	Tomato	cytosol, extracellular, mitochondrion	14.6	48.47
KRG99915	Soybean	cytosol	7.95	46.24
KRH45936	Soybean	cytosol, mitochondrion, plastid	6.28	44.74
KRH38482	Soybean	cytosol, plastid	6.65	40.91
KRH15783	Soybean	cytosol	26.06	39.5
HORVU0Hr1G008980.1	Barley	cytosol	17.56	22.73
HORVU3Hr1G067030.3	Barley	mitochondrion	21.26	22.46
HORVU4Hr1G068460.3	Barley	mitochondrion, plasma membrane	24.4	21.26

Protein Annotations

EnsemblPlants:HORVU3Hr1G019540.2	EnsemblPlantsGene:HORVU3Hr1G019540	Gene3D:3.30.830.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0046872	InterPro:Metalloenz_LuxS/M16	InterPro:Pept_M16_N	InterPro:Peptidase_M16_C	PANTHER:PTHR11851	PANTHER:PTHR11851:SF138
PFAM:PF00675	PFAM:PF05193	SUPFAM:SSF63411	UniParc:UPI000B478BA3	UniProt:A0A287KC55	MapMan:2.4.3.3.1
MapMan:18.10.2.2.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:55588450..55593873

Molecular Weight (calculated)

57262.3 Da

IEP (calculated)

7.986

GRAVY (calculated)

-0.066

Length

541 amino acids

Sequence
(BLAST)

001: SPSTCLTVSV PISPLRRIRR AAGDDPVDRS SQAPSTMYRA ASGLGALKRH GADTQMLDIA VRSASTSVAQ RSSGGFLGWL TGARSNALPP PDFALPGVTI
101: PPPLADHVEP GKTKVTTLPN GVKIASETSP GSSCSVGVYV NCGSVYETPE TLGATQLLKK LAFTTTRNRS QLRVVREIGA IGGNAKVSAN RELMSYSYGA
201: LKTYMPEMVE VLVDCVRNPA LLDWEVKEEI MKLKAELAEA SSNPEAFLLD ALHSSGYSGA LANPLIASES SISRLNTDVL EEFLALNYTS PRIVLAASGV
301: DHDELVSIAE PLLSDIRTAT GTVKPKSVYV GGEYRRAADS SNTDLALAFE LPGGWLKEKE FATASVLQAL LGGGGVFTWG RPGKGLHSRL NPLVNEFDEI
401: KSISAFKNVH SNTGIFGIHA STDAAFVPKV IDLAARELTS LATPGQVDQT QLDRAKASAK SVILRNLESK ASTTEDMGRQ ALAFGERKPV EQLLKAVDAI
501: TLADVSTVAA KIISSPLTMA SHGNVLSVPA YETVRGKFSS K

Best Arabidopsis Sequence Match ( AT1G51980.1 )
(BLAST)

001: MYRTAASRAR ALKGVLTRSL RPARYASSSA VAETSSSTPA YLSWLSGGSR AALTSLDMPL QGVSLPPPLA DKVEPSKLQI TTLPNGLKIA SETTPNPAAS
101: IGLYVDCGSI YEAPYFHGAT HLLERMAFKS TLNRTHFRLV REIEAIGGNT SASASREQMS YTIDALKTYV PEMVEVLIDS VRNPAFLDWE VNEELRKMKV
201: EIAELAKNPM GFLLEAIHSA GYSGPLASPL YAPESALDRL NGELLEEFMT ENFTAARMVL AASGVEHEEL LKVAEPLTSD LPNVPPQLAP KSQYVGGDFR
301: QHTGGEATHF AVAFEVPGWN NEKEAVTATV LQMLMGGGGS FSAGGPGKGM HSWLYRRVLN EYQEVQSCTA FTSIFNDTGL FGIYGCSSPQ FAAKAIELAA
401: KELKDVAGGK VNQAHLDRAK AATKSAVLMN LESRMIAAED IGRQILTYGE RKPVDQFLKS VDQLTLKDIA DFTSKVISKP LTMGSFGDVL AVPSYDTISS
501: KFR

Arabidopsis Description

Probable mitochondrial-processing peptidase subunit alpha-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU25]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.