Factsheet for PGSC0003DMT400000784

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 9

Predictors

GFP

MS/MS

Papers

mitochondrion: 14983062

msms PMID: 14983062 doi

Y Balmer, WH Vensel, CK Tanaka, WJ Hurkman, E Gelhaye, N Rouhier, JP Jacquot, W Manieri, P Schürmann, M Droux, BB Buchanan

Department of Plant and Microbial Biology, University of California, 111 Koshland Hall, Berkeley, CA 94720, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g008630.1.1	Tomato	plastid	97.62	97.62
VIT_11s0016g02870.t01	Wine grape	mitochondrion	76.59	76.28
GSMUA_Achr9P00130_001	Banana	mitochondrion	72.82	73.4
KRH41466	Soybean	cytosol, mitochondrion	21.63	72.67
KRH41465	Soybean	mitochondrion	50.79	71.51
KRH60182	Soybean	nucleus	72.22	71.23
GSMUA_Achr7P13650_001	Banana	mitochondrion	70.44	70.02
Os01t0739000-01	Rice	mitochondrion	68.45	69.14
Zm00001d025260_P001	Maize	mitochondrion	28.37	69.08
TraesCS1D01G346100.1	Wheat	mitochondrion	67.06	67.74
TraesCS1B01G356900.1	Wheat	golgi	66.87	67.54
Os05t0524300-01	Rice	mitochondrion, plastid	63.89	65.18
TraesCS3B01G311800.1	Wheat	mitochondrion	62.3	62.93
HORVU1Hr1G075540.3	Barley	mitochondrion	66.87	62.76
TraesCS3D01G277900.1	Wheat	mitochondrion	61.9	62.53
Zm00001d038776_P001	Maize	mitochondrion	65.08	62.12
KRG99915	Soybean	cytosol	10.71	58.06
Os01t0191500-01	Rice	mitochondrion	56.94	56.83
KXG31644	Sorghum	mitochondrion	56.15	56.04
Zm00001d039505_P001	Maize	mitochondrion	55.75	55.64
TraesCS3A01G277600.1	Wheat	mitochondrion	62.3	55.58
TraesCS3A01G107500.3	Wheat	golgi, nucleus	55.16	55.05
HORVU3Hr1G019540.2	Barley	plasma membrane	54.37	50.65
TraesCS3D01G109500.1	Wheat	plastid	55.36	50.18
TraesCS3B01G126300.1	Wheat	plastid	54.56	49.64
KRH15783	Soybean	cytosol	32.54	45.94
PGSC0003DMT400072957	Potato	mitochondrion	26.79	25.33
PGSC0003DMT400003437	Potato	mitochondrion	26.39	25.14

Protein Annotations

MapMan:18.10.2.2.1	MapMan:2.4.3.3.1	Gene3D:3.30.830.10	ProteinID:CAA46990	ProteinID:CAA46990.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004222	GO:GO:0005215	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006091	GO:GO:0006508
GO:GO:0006810	GO:GO:0008121	GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0008237
GO:GO:0009987	GO:GO:0016020	GO:GO:0016491	GO:GO:0016787	GO:GO:0019538	GO:GO:0022900
GO:GO:0046872	GO:GO:0055114	GO:GO:0070469	GO:GO:1902600	UniProt:M0ZHB0	MEROPS:M16.971
MEROPS:M16.985	InterPro:Metalloenz_LuxS/M16	PFAM:PF00675	PFAM:PF05193	EnsemblPlantsGene:PGSC0003DMG400000289	PGSC:PGSC0003DMG400000289
EnsemblPlants:PGSC0003DMT400000784	ScanProsite:PS00143	PANTHER:PTHR11851	PANTHER:PTHR11851:SF157	InterPro:Pept_M16_N	InterPro:Pept_M16_Zn_BS
InterPro:Peptidase_M16_C	SUPFAM:SSF63411	UniParc:UPI0002961C35	EMBL:X66284	SEG:seg	:

Description

Mitochondrial-processing peptidase subunit alpha [Source:PGSC_GENE;Acc:PGSC0003DMG400000289]

Coordinates

chr12:+:3919829..3929093

Molecular Weight (calculated)

54689.2 Da

IEP (calculated)

6.076

GRAVY (calculated)

-0.103

Length

504 amino acids

Sequence
(BLAST)

001: MYRCASSRLS SLKARQGNRV LTRFSSSAAV ATKPSGGLFS WITGDTSSSV TPLDFPLNDV KLSPPLPDYV EPAKTQITTL ANGLKVASEA SVNPAASIGL
101: YVDCGSIYET PASYGATHLL ERMAFKSTLN RSHLRIVREI EAIGGNVTAS ASREHMIYTY DALKTYVPQM VEMLADCVRN PAFLDWEVKE QLEKVKAEIS
201: EYSKNPQHLL LEAVHSAGYA GPYGNSLMAT EATINRLNST VLEDFVAENY TAPRMVLAAS GVEHEEFLKV AEPLLSDLPK VATTEEPKPV YVGGDYRCQA
301: DAEMTHFALA FEVPGGWMSE KESMTLTVLQ MLMGGGGSFS AGGPGKGMYS RLYLRVLNQY PQIHAFSAFS SIYNSTGLFG IQGTTSSDFG PQAVDVAVKE
401: LIAVANPSEV DQVQLNRAKQ ATKSAILMNL ESRMVASEDI GRQLLTYGER KPVEHFLKAI DAVSAKDIAS FVQKLISSPL TMASYGDVLS LPSYDAVSSR
501: FRSK

Best Arabidopsis Sequence Match ( AT1G51980.1 )
(BLAST)

001: MYRTAASRAR ALKGVLTRSL RPARYASSSA VAETSSSTPA YLSWLSGGSR AALTSLDMPL QGVSLPPPLA DKVEPSKLQI TTLPNGLKIA SETTPNPAAS
101: IGLYVDCGSI YEAPYFHGAT HLLERMAFKS TLNRTHFRLV REIEAIGGNT SASASREQMS YTIDALKTYV PEMVEVLIDS VRNPAFLDWE VNEELRKMKV
201: EIAELAKNPM GFLLEAIHSA GYSGPLASPL YAPESALDRL NGELLEEFMT ENFTAARMVL AASGVEHEEL LKVAEPLTSD LPNVPPQLAP KSQYVGGDFR
301: QHTGGEATHF AVAFEVPGWN NEKEAVTATV LQMLMGGGGS FSAGGPGKGM HSWLYRRVLN EYQEVQSCTA FTSIFNDTGL FGIYGCSSPQ FAAKAIELAA
401: KELKDVAGGK VNQAHLDRAK AATKSAVLMN LESRMIAAED IGRQILTYGE RKPVDQFLKS VDQLTLKDIA DFTSKVISKP LTMGSFGDVL AVPSYDTISS
501: KFR

Arabidopsis Description

Probable mitochondrial-processing peptidase subunit alpha-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU25]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.