Factsheet for Zm00001d038776_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

plastid: 22065420
plastid: 23198870
plasma membrane: 23508561
mitochondrion: 27297264
plasma membrane: 27341663
mitochondrion: 29575040

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 29575040 doi

WQ Wang, Y Wang, Q Zhang, IM Møller, SQ Song

Department of Molecular Biology and Genetics, Aarhus University, DK-4200 Slagelse, Denmark., Key Laboratory of Plant Molecular Physiology, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China., Key Laboratory of Plant Resources and Beijing Botanical Garden, Institute of Botany, the Chinese Academy of Sciences, Beijing 100093, China.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23508561 doi

Z Zhang, P Voothuluru, M Yamaguchi, RE Sharp, SC Peck

Division of Biochemistry, University of Missouri Columbia, MO, USA ; Christopher S. Bond Life Sciences Center, University of Missouri Columbia, MO, USA ; Interdisciplinary Plant Group, University of Missouri Columbia, MO, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025260_P001	Maize	mitochondrion	38.45	98.07
TraesCS1D01G346100.1	Wheat	mitochondrion	80.11	84.77
TraesCS1B01G356900.1	Wheat	golgi	79.55	84.17
Os05t0524300-01	Rice	mitochondrion, plastid	77.46	82.79
HORVU1Hr1G075540.3	Barley	mitochondrion	80.11	78.77
GSMUA_Achr9P00130_001	Banana	mitochondrion	71.4	75.4
GSMUA_Achr7P13650_001	Banana	mitochondrion	70.83	73.77
VIT_09s0002g03200.t01	Wine grape	mitochondrion	69.89	72.92
VIT_11s0016g02870.t01	Wine grape	mitochondrion	69.7	72.73
KRH44259	Soybean	mitochondrion	68.94	72.08
KRH09954	Soybean	mitochondrion	66.67	71.69
KRH47194	Soybean	mitochondrion	68.56	71.68
KRH23379	Soybean	endoplasmic reticulum	66.48	71.49
KRH41465	Soybean	mitochondrion	46.78	68.99
KRH60182	Soybean	nucleus	64.39	66.54
Bra030405.1-P	Field mustard	mitochondrion	63.26	66.27
CDY45641	Canola	mitochondrion	63.26	66.27
AT3G16480.1	Thale cress	mitochondrion	62.5	66.13
CDX87868	Canola	mitochondrion	63.07	66.07
CDY33843	Canola	mitochondrion	62.69	65.94
CDY22877	Canola	mitochondrion	62.88	65.87
Bra014305.1-P	Field mustard	mitochondrion	62.12	65.34
Bra018939.1-P	Field mustard	mitochondrion	62.5	65.22
CDY46536	Canola	mitochondrion	61.93	65.14
PGSC0003DMT400000784	Potato	mitochondrion	62.12	65.08
Solyc12g008630.1.1	Tomato	plastid	61.93	64.88
CDY53441	Canola	mitochondrion	60.98	64.14
AT1G51980.1	Thale cress	mitochondrion	60.8	63.82
KRH41466	Soybean	cytosol, mitochondrion	17.99	63.33
CDX92075	Canola	mitochondrion	58.33	62.22
Bra022162.1-P	Field mustard	mitochondrion	57.95	61.82
CDY43102	Canola	mitochondrion	57.58	61.54
Zm00001d039505_P001	Maize	mitochondrion	57.01	59.6
Solyc05g026150.1.1	Tomato	cytosol, extracellular, mitochondrion	17.99	58.28
CDY06399	Canola	mitochondrion	25.76	57.14
KRG99915	Soybean	cytosol	10.04	56.99
Zm00001d041995_P002	Maize	mitochondrion	49.43	51.89
Zm00001d051210_P001	Maize	mitochondrion	32.39	50.44
KRH38482	Soybean	cytosol, plastid	7.95	47.73
KRH45936	Soybean	cytosol, mitochondrion, plastid	6.82	47.37
Zm00001d011796_P002	Maize	mitochondrion	43.94	44.79
KRH15783	Soybean	cytosol	30.11	44.54
Zm00001d028194_P003	Maize	mitochondrion, plasma membrane, plastid	26.7	26.6
Zm00001d048102_P003	Maize	mitochondrion	26.7	26.6
Zm00001d011706_P003	Maize	mitochondrion	23.3	25.89
Zm00001d007854_P002	Maize	extracellular	7.39	22.03
Zm00001d019992_P003	Maize	cytosol	9.47	18.05

Protein Annotations

MapMan:18.10.2.2.1	MapMan:2.4.3.3.1	Gene3D:3.30.830.10	UniProt:A0A1D6MAI3	ProteinID:AQK87788.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004222	GO:GO:0005488	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0019538	GO:GO:0046872	InterPro:Metalloenz_LuxS/M16	PFAM:PF00675	PFAM:PF05193
ScanProsite:PS00143	PANTHER:PTHR11851	PANTHER:PTHR11851:SF145	InterPro:Pept_M16_N	InterPro:Pept_M16_Zn_BS	InterPro:Peptidase_M16_C
SUPFAM:SSF63411	UniParc:UPI00084502FB	EnsemblPlantsGene:Zm00001d038776	EnsemblPlants:Zm00001d038776_P001	EnsemblPlants:Zm00001d038776_T001	SEG:seg

Description

Probable mitochondrial-processing peptidase subunit alpha-2 chloroplastic/mitochondrial

Coordinates

chr6:-:164207910..164212069

Molecular Weight (calculated)

57149.1 Da

IEP (calculated)

5.892

GRAVY (calculated)

-0.046

Length

528 amino acids

Sequence
(BLAST)

001: MYRAAGSHLR SLKHHGASRL ASTSVAKQSS GGLFSWLLGG KSSELPPLDV PLPGISIPSP LPDFVEPSKT KVTTLPNGVK IASETSSSPA ASVGLYIDCG
101: SIYETPASSG VSHLLERMAF KSTVNRTHLR LVREVEAIGG NVSASASREQ MSYTYDALKS YTPEMVEVLI DSVRNPAFLD WEVKEQLQNI KSEIADASAN
201: PQGLLLEALH SVGYSGALAK PLMASESAVN RLDVSSLEEF VAEHYTAPRM VLAASGVDHD ALISVVEPLL SDLPCVKRPE EPKSVYVGGD YRCQADSPNT
301: HIALAFEVPG GWNQEKTAMV VTVLQMLMGG GGSFSAGGPG KGMHSRLYLR VLTNFQQIES FSAFNSVYNN SGLFGIYAVT SPDFSSKAVD LAAGELLEIA
401: TPGKGFFLAS FLFLFWVDHY QSQSFVLHVL PPVVTQEQLD RAKEATKSAV LMNLESRSIA SEDIGRQVLT YGERKPIEYF LKTVEEITLN DILSTAKEMM
501: STPLTMASWG DVIHVPSYES VSRKFHSK

Best Arabidopsis Sequence Match ( AT3G16480.1 )
(BLAST)

001: MYRTAASRAK ALKGILNHNF RASRYASSSA VATSSSSSSW LSGGYSSSLP SMNIPLAGVS LPPPLSDHVE PSKLKTTTLP NGLTIATEMS PNPAASIGLY
101: VDCGSIYETP QFRGATHLLE RMAFKSTLNR SHFRLVREIE AIGGNTSASA SREQMGYTID ALKTYVPEMV EVLIDSVRNP AFLDWEVNEE LRKVKVEIGE
201: FATNPMGFLL EAVHSAGYSG ALANPLYAPE SAITGLTGEV LENFVFENYT ASRMVLAASG VDHEELLKVV EPLLSDLPNV PRPAEPKSQY VGGDFRQHTG
301: GEATHFALAF EVPGWNNEKE AIIATVLQML MGGGGSFSAG GPGKGMHSWL YLRLLNQHQQ FQSCTAFTSV FNNTGLFGIY GCTSPEFASQ GIELVASEMN
401: AVADGKVNQK HLDRAKAATK SAILMNLESR MIAAEDIGRQ ILTYGERKPV DQFLKTVDQL TLKDIADFTS KVITKPLTMA TFGDVLNVPS YDSVSKRFR

Arabidopsis Description

MPPA2Probable mitochondrial-processing peptidase subunit alpha-2, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O04308]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.