Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G51980.1 | KRH44613 | AT3G21150.1 | 21798944 |
| AT1G51980.1 | KRH47291 | AT3G21150.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH45936 | Soybean | cytosol, mitochondrion, plastid | 56.82 | 65.79 |
| KRH41466 | Soybean | cytosol, mitochondrion | 37.5 | 22.0 |
| KRH09954 | Soybean | mitochondrion | 59.09 | 10.59 |
| KRH23379 | Soybean | endoplasmic reticulum | 56.82 | 10.18 |
| GSMUA_Achr9P00130_001 | Banana | mitochondrion | 52.27 | 9.2 |
| KRH47194 | Soybean | mitochondrion | 52.27 | 9.11 |
| KRH44259 | Soybean | mitochondrion | 52.27 | 9.11 |
| VIT_09s0002g03200.t01 | Wine grape | mitochondrion | 51.14 | 8.89 |
| GSMUA_Achr7P13650_001 | Banana | mitochondrion | 51.14 | 8.88 |
| KRH60182 | Soybean | nucleus | 48.86 | 8.41 |
| TraesCS1D01G346100.1 | Wheat | mitochondrion | 46.59 | 8.22 |
| TraesCS1B01G356900.1 | Wheat | golgi | 46.59 | 8.22 |
| Os01t0739000-01 | Rice | mitochondrion | 46.59 | 8.22 |
| Zm00001d038776_P001 | Maize | mitochondrion | 47.73 | 7.95 |
| Os05t0524300-01 | Rice | mitochondrion, plastid | 44.32 | 7.89 |
| KXG31644 | Sorghum | mitochondrion | 44.32 | 7.72 |
| HORVU1Hr1G075540.3 | Barley | mitochondrion | 46.59 | 7.64 |
| Zm00001d039505_P001 | Maize | mitochondrion | 43.18 | 7.52 |
| AT1G51980.1 | Thale cress | mitochondrion | 42.05 | 7.36 |
| Os01t0191500-01 | Rice | mitochondrion | 42.05 | 7.33 |
| TraesCS3D01G277900.1 | Wheat | mitochondrion | 40.91 | 7.21 |
| TraesCS3B01G311800.1 | Wheat | mitochondrion | 40.91 | 7.21 |
| CDY53441 | Canola | mitochondrion | 40.91 | 7.17 |
| Bra014305.1-P | Field mustard | mitochondrion | 40.91 | 7.17 |
| CDY46536 | Canola | mitochondrion | 40.91 | 7.17 |
| CDY33843 | Canola | mitochondrion | 40.91 | 7.17 |
| CDY22877 | Canola | mitochondrion | 40.91 | 7.14 |
| Bra018939.1-P | Field mustard | mitochondrion | 40.91 | 7.11 |
| CDY45641 | Canola | mitochondrion | 39.77 | 6.94 |
| CDX87868 | Canola | mitochondrion | 39.77 | 6.94 |
| Bra030405.1-P | Field mustard | mitochondrion | 39.77 | 6.94 |
| TraesCS3A01G107500.3 | Wheat | golgi, nucleus | 39.77 | 6.93 |
| CDY43102 | Canola | mitochondrion | 37.5 | 6.68 |
| CDX92075 | Canola | mitochondrion | 37.5 | 6.67 |
| Bra022162.1-P | Field mustard | mitochondrion | 37.5 | 6.67 |
| TraesCS3D01G109500.1 | Wheat | plastid | 42.05 | 6.65 |
| HORVU3Hr1G019540.2 | Barley | plasma membrane | 40.91 | 6.65 |
| TraesCS3A01G277600.1 | Wheat | mitochondrion | 42.05 | 6.55 |
| TraesCS3B01G126300.1 | Wheat | plastid | 40.91 | 6.5 |
| AT3G16480.1 | Thale cress | mitochondrion | 35.23 | 6.21 |
| KRG99600 | Soybean | mitochondrion | 21.59 | 3.61 |
| KRH46614 | Soybean | mitochondrion | 21.59 | 3.6 |
| KRH07415 | Soybean | mitochondrion | 20.45 | 3.44 |
| CDY06399 | Canola | mitochondrion | 6.82 | 2.52 |
| KRH41465 | Soybean | mitochondrion | 9.09 | 2.23 |
| KRG99915 | Soybean | cytosol | 2.27 | 2.15 |
| KRH15783 | Soybean | cytosol | 4.55 | 1.12 |
| Zm00001d025260_P001 | Maize | mitochondrion | 1.14 | 0.48 |
Protein Annotations
| EMBL:ACUP02005819 | EnsemblPlants:KRH38482 | EnsemblPlantsGene:GLYMA_09G138700 | Gene3D:3.30.830.10 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0046872 | PANTHER:PTHR11851 | PANTHER:PTHR11851:SF157 | ProteinID:KRH38482 | ProteinID:KRH38482.1 |
| UniParc:UPI0006EE0C1A | UniProt:A0A0R0IC03 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr9:-:34423834..34426009
Molecular Weight (calculated)
9519.2 Da
IEP (calculated)
5.584
GRAVY (calculated)
0.078
Length
88 amino acids
Sequence
(BLAST)
(BLAST)
1: MEQFLAIHDV SCLNRSSFSQ GFIFGSASSA YQGSDFVAKA VDLAARELIT SASLGQVTQV QLDRAKVSTK SAVLMNLESE YALSNSHW
001: MYRTAASRAR ALKGVLTRSL RPARYASSSA VAETSSSTPA YLSWLSGGSR AALTSLDMPL QGVSLPPPLA DKVEPSKLQI TTLPNGLKIA SETTPNPAAS
101: IGLYVDCGSI YEAPYFHGAT HLLERMAFKS TLNRTHFRLV REIEAIGGNT SASASREQMS YTIDALKTYV PEMVEVLIDS VRNPAFLDWE VNEELRKMKV
201: EIAELAKNPM GFLLEAIHSA GYSGPLASPL YAPESALDRL NGELLEEFMT ENFTAARMVL AASGVEHEEL LKVAEPLTSD LPNVPPQLAP KSQYVGGDFR
301: QHTGGEATHF AVAFEVPGWN NEKEAVTATV LQMLMGGGGS FSAGGPGKGM HSWLYRRVLN EYQEVQSCTA FTSIFNDTGL FGIYGCSSPQ FAAKAIELAA
401: KELKDVAGGK VNQAHLDRAK AATKSAVLMN LESRMIAAED IGRQILTYGE S
101: IGLYVDCGSI YEAPYFHGAT HLLERMAFKS TLNRTHFRLV REIEAIGGNT SASASREQMS YTIDALKTYV PEMVEVLIDS VRNPAFLDWE VNEELRKMKV
201: EIAELAKNPM GFLLEAIHSA GYSGPLASPL YAPESALDRL NGELLEEFMT ENFTAARMVL AASGVEHEEL LKVAEPLTSD LPNVPPQLAP KSQYVGGDFR
301: QHTGGEATHF AVAFEVPGWN NEKEAVTATV LQMLMGGGGS FSAGGPGKGM HSWLYRRVLN EYQEVQSCTA FTSIFNDTGL FGIYGCSSPQ FAAKAIELAA
401: KELKDVAGGK VNQAHLDRAK AATKSAVLMN LESRMIAAED IGRQILTYGE S
Arabidopsis Description
Probable mitochondrial-processing peptidase subunit alpha-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU25]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.