CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH44613
KRH47291

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G51980.1	KRH44613	AT3G21150.1	21798944
AT1G51980.1	KRH47291	AT3G21150.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH23379	Soybean	endoplasmic reticulum	95.11	95.11
KRH44259	Soybean	mitochondrion	85.54	83.17
KRH47194	Soybean	mitochondrion	85.13	82.77
VIT_09s0002g03200.t01	Wine grape	mitochondrion	82.08	79.64
GSMUA_Achr9P00130_001	Banana	mitochondrion	76.99	75.6
GSMUA_Achr7P13650_001	Banana	mitochondrion	75.97	73.57
KRH41465	Soybean	mitochondrion	52.95	72.63
KRH60182	Soybean	nucleus	74.34	71.43
KRH41466	Soybean	cytosol, mitochondrion	21.59	70.67
Os01t0739000-01	Rice	mitochondrion	70.88	69.74
TraesCS1D01G346100.1	Wheat	mitochondrion	70.67	69.54
Zm00001d025260_P001	Maize	mitochondrion	29.12	69.08
TraesCS1B01G356900.1	Wheat	golgi	70.06	68.94
CDY33843	Canola	mitochondrion	70.26	68.73
CDY45641	Canola	mitochondrion	70.26	68.45
Bra030405.1-P	Field mustard	mitochondrion	70.26	68.45
Os05t0524300-01	Rice	mitochondrion, plastid	68.84	68.42
CDY46536	Canola	mitochondrion	69.86	68.33
CDY53441	Canola	mitochondrion	69.86	68.33
Bra014305.1-P	Field mustard	mitochondrion	69.86	68.33
CDY22877	Canola	mitochondrion	70.06	68.25
CDX87868	Canola	mitochondrion	70.06	68.25
Bra018939.1-P	Field mustard	mitochondrion	69.86	67.79
AT3G16480.1	Thale cress	mitochondrion	68.84	67.74
Zm00001d038776_P001	Maize	mitochondrion	71.69	66.67
AT1G51980.1	Thale cress	mitochondrion	67.62	66.0
CDX92075	Canola	mitochondrion	66.4	65.86
Bra022162.1-P	Field mustard	mitochondrion	66.19	65.66
CDY43102	Canola	mitochondrion	65.78	65.38
TraesCS3D01G277900.1	Wheat	mitochondrion	65.58	64.53
HORVU1Hr1G075540.3	Barley	mitochondrion	70.47	64.43
TraesCS3B01G311800.1	Wheat	mitochondrion	65.38	64.33
CDY06399	Canola	mitochondrion	30.96	63.87
KRH45936	Soybean	cytosol, mitochondrion, plastid	9.37	60.53
KRG99915	Soybean	cytosol	11.41	60.22
Os01t0191500-01	Rice	mitochondrion	61.3	59.6
KRH38482	Soybean	cytosol, plastid	10.59	59.09
KXG31644	Sorghum	mitochondrion	59.47	57.82
TraesCS3A01G107500.3	Wheat	golgi, nucleus	59.47	57.82
Zm00001d039505_P001	Maize	mitochondrion	59.47	57.82
TraesCS3A01G277600.1	Wheat	mitochondrion	65.38	56.81
HORVU3Hr1G019540.2	Barley	plasma membrane	59.47	53.97
TraesCS3B01G126300.1	Wheat	plastid	60.29	53.43
TraesCS3D01G109500.1	Wheat	plastid	60.49	53.42
KRH15783	Soybean	cytosol	33.81	46.5
KRH07415	Soybean	mitochondrion	27.7	26.0
KRH46614	Soybean	mitochondrion	27.7	25.76
KRG99600	Soybean	mitochondrion	27.29	25.43

Protein Annotations

EntrezGene:100810996	MapMan:18.10.2.2.1	MapMan:2.4.3.3.1	Gene3D:3.30.830.10	EMBL:ACUP02009115	EnsemblPlantsGene:GLYMA_15G020800
GO:GO:0003674	GO:GO:0003824	GO:GO:0004222	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0005743	GO:GO:0006508	GO:GO:0006627
GO:GO:0006810	GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009987	GO:GO:0016020
GO:GO:0016043	GO:GO:0016787	GO:GO:0019538	GO:GO:0046872	UniProt:I1MCV9	EnsemblPlants:KRH09954
ProteinID:KRH09954	ProteinID:KRH09954.1	ProteinID:KRH09955.1	InterPro:Metalloenz_LuxS/M16	PFAM:PF00675	PFAM:PF05193
ScanProsite:PS00143	PANTHER:PTHR11851	PANTHER:PTHR11851:SF157	InterPro:Pept_M16_N	InterPro:Pept_M16_Zn_BS	InterPro:Peptidase_M16_C
SUPFAM:SSF63411	UniParc:UPI000233B2F6	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr15:-:1605458..1610034

Molecular Weight (calculated)

52841.1 Da

IEP (calculated)

6.078

GRAVY (calculated)

-0.104

Length

491 amino acids

Sequence
(BLAST)

001: MYRAVASRLT LPKGNGRTLG ASRGLFNWLT GESSNPLPPL DTPLRGVSLP PSLPDYVEPS KTKITTLPNG LKIASETSPN PAASIGLYVD CGSLYETPLS
101: SGASHLLEKM SFKSTANRSH FRVVREVEAV GGNVGASASR EQMGYTFDAL KTYVPQMIEL LVDCVRNPAF LDWEVNEELR KVKSELGELS NNPQGLLLEA
201: VHSAGYSGAL ANPLLASESA LNTLNSSLLE EFVAENYTAS RMVLAASGVE HEELLSVAEP LLSDLPSVPC PEEPKSEYVG GDFRRQGEPG VAHVAIAFEV
301: PGGWKKEKEA IVLTVLQMLM GGGGSFSAGG PGKGMHSRLF LRVLNEHQQI HSFSAFNSLF NNTGLFGIYA STGSDFVAKA VDLAARELIA IASPGQVSQV
401: QLDRAKVSTK SAVLMNLESR MIASEDIGRQ ILTYGERKPL EQFFKAVDGI TLNDITKISQ KIISSPLTMA SYGDVFNVPS YESVSRKFHA K

Best Arabidopsis Sequence Match ( AT3G16480.1 )
(BLAST)

001: MYRTAASRAK ALKGILNHNF RASRYASSSA VATSSSSSSW LSGGYSSSLP SMNIPLAGVS LPPPLSDHVE PSKLKTTTLP NGLTIATEMS PNPAASIGLY
101: VDCGSIYETP QFRGATHLLE RMAFKSTLNR SHFRLVREIE AIGGNTSASA SREQMGYTID ALKTYVPEMV EVLIDSVRNP AFLDWEVNEE LRKVKVEIGE
201: FATNPMGFLL EAVHSAGYSG ALANPLYAPE SAITGLTGEV LENFVFENYT ASRMVLAASG VDHEELLKVV EPLLSDLPNV PRPAEPKSQY VGGDFRQHTG
301: GEATHFALAF EVPGWNNEKE AIIATVLQML MGGGGSFSAG GPGKGMHSWL YLRLLNQHQQ FQSCTAFTSV FNNTGLFGIY GCTSPEFASQ GIELVASEMN
401: AVADGKVNQK HLDRAKAATK SAILMNLESR MIAAEDIGRQ ILTYGERKPV DQFLKTVDQL TLKDIADFTS KVITKPLTMA TFGDVLNVPS YDSVSKRFR

Arabidopsis Description

MPPA2Probable mitochondrial-processing peptidase subunit alpha-2, chloroplastic/mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:O04308]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.