Factsheet for TraesCS1B01G356900.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G346100.1	Wheat	mitochondrion	98.8	98.8
HORVU1Hr1G075540.3	Barley	mitochondrion	97.19	90.32
Os05t0524300-01	Rice	mitochondrion, plastid	83.77	84.62
Zm00001d025260_P001	Maize	mitochondrion	35.07	84.54
Zm00001d038776_P001	Maize	mitochondrion	84.17	79.55
GSMUA_Achr9P00130_001	Banana	mitochondrion	76.95	76.8
TraesCS3B01G311800.1	Wheat	mitochondrion	76.55	76.55
GSMUA_Achr7P13650_001	Banana	mitochondrion	75.35	74.16
VIT_09s0002g03200.t01	Wine grape	mitochondrion	73.55	72.53
VIT_11s0016g02870.t01	Wine grape	mitochondrion	73.35	72.33
KRH47194	Soybean	mitochondrion	72.75	71.88
KRH44259	Soybean	mitochondrion	72.75	71.88
KRH09954	Soybean	mitochondrion	68.94	70.06
KRH23379	Soybean	endoplasmic reticulum	68.54	69.65
KRH41465	Soybean	mitochondrion	49.5	68.99
KRH60182	Soybean	nucleus	68.54	66.93
PGSC0003DMT400000784	Potato	mitochondrion	67.54	66.87
Solyc12g008630.1.1	Tomato	plastid	67.33	66.67
KRH41466	Soybean	cytosol, mitochondrion	19.64	65.33
Bra014305.1-P	Field mustard	mitochondrion	65.53	65.14
CDY33843	Canola	mitochondrion	65.53	65.14
CDY45641	Canola	mitochondrion	65.73	65.08
Bra030405.1-P	Field mustard	mitochondrion	65.73	65.08
CDY22877	Canola	mitochondrion	65.73	65.08
CDX87868	Canola	mitochondrion	65.53	64.88
CDY46536	Canola	mitochondrion	65.13	64.74
Bra018939.1-P	Field mustard	mitochondrion	65.33	64.43
AT3G16480.1	Thale cress	mitochondrion	64.13	64.13
CDY53441	Canola	mitochondrion	63.93	63.55
AT1G51980.1	Thale cress	mitochondrion	63.53	63.02
CDX92075	Canola	mitochondrion	61.12	61.62
Bra022162.1-P	Field mustard	mitochondrion	60.72	61.21
CDY43102	Canola	mitochondrion	60.32	60.93
CDY06399	Canola	mitochondrion	27.66	57.98
Solyc05g026150.1.1	Tomato	cytosol, extracellular, mitochondrion	18.84	57.67
KRG99915	Soybean	cytosol	10.42	55.91
TraesCS3B01G126300.1	Wheat	plastid	60.32	54.33
KRH38482	Soybean	cytosol, plastid	8.22	46.59
KRH45936	Soybean	cytosol, mitochondrion, plastid	7.01	46.05
KRH15783	Soybean	cytosol	32.26	45.1
TraesCS4B01G248700.2	Wheat	golgi, mitochondrion	27.86	26.23
TraesCS3B01G279900.1	Wheat	mitochondrion	26.05	25.84

Protein Annotations

MapMan:18.10.2.2.1	MapMan:2.4.3.3.1	Gene3D:3.30.830.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004222
GO:GO:0005488	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538
GO:GO:0046872	InterPro:Metalloenz_LuxS/M16	PFAM:PF00675	PFAM:PF05193	ScanProsite:PS00143	PANTHER:PTHR11851
PANTHER:PTHR11851:SF145	InterPro:Pept_M16_N	InterPro:Pept_M16_Zn_BS	InterPro:Peptidase_M16_C	SUPFAM:SSF63411	EnsemblPlantsGene:TraesCS1B01G356900
EnsemblPlants:TraesCS1B01G356900.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:586289457..586296313

Molecular Weight (calculated)

53743.9 Da

IEP (calculated)

5.954

GRAVY (calculated)

-0.113

Length

499 amino acids

Sequence
(BLAST)

001: MYRAAGSHFR SLKNHGASRF ASTSVVKQSS GGLFSWLLGG GSSQLPPLDV PLPGITIPPP LPDFVEQSKT KITTLPSGIK IASETSPGAA ASVGLYIDCG
101: SIYETPASSG ASHLLERMAF RSTTNRSHLR LVREVEAIGG NVSASASREQ MSYTYDALKS YAPEMVEVLV DSVRNPAFLE WEVKEQLQKI KSEISEVSSN
201: PQGLLLEALH SAGYSGALAK PLMATESAIN RLDISTLEEF IHENYTAPRM VLAASGLEHD ELVSIAEPML SDLPGVKRHE EPKSVYVGGD YRCQADSPNT
301: HIALAFEVPG GWRQEKTAMI VTVLQMLMGG GGSFSVGGPG KGMHSRLYLR VLNKYDQIES FSAFNSIYND SGLFGIHAAT SPDFASTAVD LAAGELLEVA
401: TPGKVTQEQL DRAKEATKAA VLMNLESRIV ASEDIGRQVL TYGQRKPVEY FVRAVEATTL DDISTVAQKI ISSPLTLASW GDVIHVPSYE SVSRKFLSK

Best Arabidopsis Sequence Match ( AT1G51980.1 )
(BLAST)

001: MYRTAASRAR ALKGVLTRSL RPARYASSSA VAETSSSTPA YLSWLSGGSR AALTSLDMPL QGVSLPPPLA DKVEPSKLQI TTLPNGLKIA SETTPNPAAS
101: IGLYVDCGSI YEAPYFHGAT HLLERMAFKS TLNRTHFRLV REIEAIGGNT SASASREQMS YTIDALKTYV PEMVEVLIDS VRNPAFLDWE VNEELRKMKV
201: EIAELAKNPM GFLLEAIHSA GYSGPLASPL YAPESALDRL NGELLEEFMT ENFTAARMVL AASGVEHEEL LKVAEPLTSD LPNVPPQLAP KSQYVGGDFR
301: QHTGGEATHF AVAFEVPGWN NEKEAVTATV LQMLMGGGGS FSAGGPGKGM HSWLYRRVLN EYQEVQSCTA FTSIFNDTGL FGIYGCSSPQ FAAKAIELAA
401: KELKDVAGGK VNQAHLDRAK AATKSAVLMN LESRMIAAED IGRQILTYGE RKPVDQFLKS VDQLTLKDIA DFTSKVISKP LTMGSFGDVL AVPSYDTISS
501: KFR

Arabidopsis Description

Probable mitochondrial-processing peptidase subunit alpha-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU25]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.