Factsheet for VIT_11s0016g02870.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g03200.t01	Wine grape	mitochondrion	83.2	83.2
GSMUA_Achr9P00130_001	Banana	mitochondrion	79.84	80.8
KRH41466	Soybean	cytosol, mitochondrion	23.72	80.0
KRH60182	Soybean	nucleus	80.24	79.45
KRH41465	Soybean	mitochondrion	56.13	79.33
GSMUA_Achr7P13650_001	Banana	mitochondrion	77.67	77.51
Solyc12g008630.1.1	Tomato	plastid	76.88	77.18
Zm00001d025260_P001	Maize	mitochondrion	31.42	76.81
PGSC0003DMT400000784	Potato	mitochondrion	76.28	76.59
Os01t0739000-01	Rice	mitochondrion	75.49	76.55
TraesCS1D01G346100.1	Wheat	mitochondrion	72.53	73.55
TraesCS1B01G356900.1	Wheat	golgi	72.33	73.35
Os05t0524300-01	Rice	mitochondrion, plastid	70.16	71.86
Zm00001d038776_P001	Maize	mitochondrion	72.73	69.7
TraesCS3B01G311800.1	Wheat	mitochondrion	68.38	69.34
TraesCS3D01G277900.1	Wheat	mitochondrion	68.38	69.34
KRG99915	Soybean	cytosol	12.65	68.82
HORVU1Hr1G075540.3	Barley	mitochondrion	72.73	68.53
Solyc05g026150.1.1	Tomato	cytosol, extracellular, mitochondrion	20.16	62.58
TraesCS3A01G277600.1	Wheat	mitochondrion	68.38	61.24
Os01t0191500-01	Rice	mitochondrion	60.67	60.79
KXG31644	Sorghum	mitochondrion	59.49	59.6
Zm00001d039505_P001	Maize	mitochondrion	59.29	59.41
TraesCS3A01G107500.3	Wheat	golgi, nucleus	59.09	59.21
HORVU3Hr1G019540.2	Barley	plasma membrane	58.7	54.9
TraesCS3B01G126300.1	Wheat	plastid	59.49	54.33
TraesCS3D01G109500.1	Wheat	plastid	59.68	54.32
KRH15783	Soybean	cytosol	35.97	50.98
VIT_14s0108g01650.t01	Wine grape	plastid	25.49	25.85
VIT_01s0011g00740.t01	Wine grape	plastid	23.12	20.67

Protein Annotations

EntrezGene:100266273	wikigene:100266273	MapMan:18.10.2.2.1	MapMan:2.4.3.3.1	Gene3D:3.30.830.10	ProteinID:CBI27974
ProteinID:CBI27974.3	UniProt:D7TBD9	EMBL:FN595756	GO:GO:0003674	GO:GO:0003824	GO:GO:0004222
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0005743	GO:GO:0006508	GO:GO:0006627	GO:GO:0006810	GO:GO:0008150	GO:GO:0008152
GO:GO:0008270	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0016787	GO:GO:0019538
GO:GO:0046872	EntrezGene:LOC100266273	wikigene:LOC100266273	InterPro:Metalloenz_LuxS/M16	PFAM:PF00675	PFAM:PF05193
ScanProsite:PS00143	PANTHER:PTHR11851	PANTHER:PTHR11851:SF157	InterPro:Pept_M16_N	InterPro:Pept_M16_Zn_BS	InterPro:Peptidase_M16_C
SUPFAM:SSF63411	UniParc:UPI00015C8D40	ArrayExpress:VIT_11s0016g02870	EnsemblPlantsGene:VIT_11s0016g02870	EnsemblPlants:VIT_11s0016g02870.t01	unigene:Vvi.158
RefSeq:XP_002283310	RefSeq:XP_002283310.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr11:+:2313394..2319205

Molecular Weight (calculated)

54475.1 Da

IEP (calculated)

5.774

GRAVY (calculated)

-0.041

Length

506 amino acids

Sequence
(BLAST)

001: MYRTAASRVR ALKGRAGSRA LIRFASSSAV ATSSSSSGGL FSWLIGDKSK TLPPLDFPLP NVALPPALPD YVEPSKVKIT TISNGVKIAS ETSANPAASI
101: GLYVDCGSIY ETPISFGATH LLERMAFKST INRSYLRVIR EVEAIGGNVT ASASREQMGY TFDALKTYVP EMVELLIDSV RNPAFLDWEV SEQLEKVKAE
201: IGEASNNPQG LLLEALHSAG YSGALANPLL APESAINRLD STILEEFVAL NYTAPRMVLA ASGVEHEELL SVAEPLLSDL PSVPRPEEPK SVYVGGDYRC
301: QADSGKTHFA LAFEVPGGWH KEKEAMTLTV LQMLMGGGGS FSAGGPGKGM YSRLYLRVLN TYPQIQSFSA FNSIYNNTGL FGIQATTGSD FVSKAIDIAA
401: KELVAVATPG QVDQVQLDRA KQTTKTAVLM NLESRMVASE DIGRQILTYG ERKPVDHFLK AVDEVTLKDI ASITQKLLSS PLTMASYGDV IFVPSYENVS
501: SKFQSK

Best Arabidopsis Sequence Match ( AT1G51980.1 )
(BLAST)

001: MYRTAASRAR ALKGVLTRSL RPARYASSSA VAETSSSTPA YLSWLSGGSR AALTSLDMPL QGVSLPPPLA DKVEPSKLQI TTLPNGLKIA SETTPNPAAS
101: IGLYVDCGSI YEAPYFHGAT HLLERMAFKS TLNRTHFRLV REIEAIGGNT SASASREQMS YTIDALKTYV PEMVEVLIDS VRNPAFLDWE VNEELRKMKV
201: EIAELAKNPM GFLLEAIHSA GYSGPLASPL YAPESALDRL NGELLEEFMT ENFTAARMVL AASGVEHEEL LKVAEPLTSD LPNVPPQLAP KSQYVGGDFR
301: QHTGGEATHF AVAFEVPGWN NEKEAVTATV LQMLMGGGGS FSAGGPGKGM HSWLYRRVLN EYQEVQSCTA FTSIFNDTGL FGIYGCSSPQ FAAKAIELAA
401: KELKDVAGGK VNQAHLDRAK AATKSAVLMN LESRMIAAED IGRQILTYGE RKPVDQFLKS VDQLTLKDIA DFTSKVISKP LTMGSFGDVL AVPSYDTISS
501: KFR

Arabidopsis Description

Probable mitochondrial-processing peptidase subunit alpha-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU25]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.