Factsheet for Bra018939.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 8

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001815.1-P
Bra031255.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G51980.1	Bra001815.1-P	AT3G21150.1	21798944
AT1G51980.1	Bra031255.1-P	AT3G21150.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY22877	Canola	mitochondrion	98.81	99.21
Bra030405.1-P	Field mustard	mitochondrion	95.26	95.63
Bra014305.1-P	Field mustard	mitochondrion	93.87	94.62
AT1G51980.1	Thale cress	mitochondrion	88.14	88.67
Bra022162.1-P	Field mustard	mitochondrion	77.47	79.19
VIT_09s0002g03200.t01	Wine grape	mitochondrion	70.75	70.75
KRH47194	Soybean	mitochondrion	69.76	69.9
KRH09954	Soybean	mitochondrion	67.79	69.86
KRH44259	Soybean	mitochondrion	69.37	69.5
GSMUA_Achr9P00130_001	Banana	mitochondrion	67.98	68.8
KRH23379	Soybean	endoplasmic reticulum	66.6	68.64
Zm00001d025260_P001	Maize	mitochondrion	28.06	68.6
GSMUA_Achr7P13650_001	Banana	mitochondrion	67.98	67.85
Os01t0739000-01	Rice	mitochondrion	65.81	66.73
TraesCS1D01G346100.1	Wheat	mitochondrion	64.62	65.53
TraesCS1B01G356900.1	Wheat	golgi	64.43	65.33
Os05t0524300-01	Rice	mitochondrion, plastid	63.04	64.57
Zm00001d038776_P001	Maize	mitochondrion	65.22	62.5
HORVU1Hr1G075540.3	Barley	mitochondrion	65.22	61.45
TraesCS3B01G311800.1	Wheat	mitochondrion	60.08	60.92
TraesCS3D01G277900.1	Wheat	mitochondrion	59.88	60.72
Os01t0191500-01	Rice	mitochondrion	57.51	57.62
Zm00001d039505_P001	Maize	mitochondrion	55.34	55.45
KXG31644	Sorghum	mitochondrion	55.14	55.25
TraesCS3A01G107500.3	Wheat	golgi, nucleus	55.14	55.25
TraesCS3A01G277600.1	Wheat	mitochondrion	60.08	53.81
HORVU3Hr1G019540.2	Barley	plasma membrane	55.14	51.57
TraesCS3D01G109500.1	Wheat	plastid	55.93	50.9
TraesCS3B01G126300.1	Wheat	plastid	55.14	50.36
KRH45936	Soybean	cytosol, mitochondrion, plastid	6.92	46.05
KRH38482	Soybean	cytosol, plastid	7.11	40.91
Bra039151.1-P	Field mustard	mitochondrion	25.69	24.57
Bra021477.1-P	Field mustard	mitochondrion	25.49	24.48

Protein Annotations

MapMan:18.10.2.2.1	MapMan:2.4.3.3.1	Gene3D:3.30.830.10	EnsemblPlantsGene:Bra018939	EnsemblPlants:Bra018939.1	EnsemblPlants:Bra018939.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004222	GO:GO:0005488	GO:GO:0006508	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	GO:GO:0019538	GO:GO:0046872	UniProt:M4DQZ6	InterPro:Metalloenz_LuxS/M16
PFAM:PF00675	PFAM:PF05193	ScanProsite:PS00143	PANTHER:PTHR11851	PANTHER:PTHR11851:SF157	InterPro:Pept_M16_N
InterPro:Pept_M16_Zn_BS	InterPro:Peptidase_M16_C	SUPFAM:SSF63411	UniParc:UPI000253E972	SEG:seg	:

Description

AT1G51980 (E=7e-228) | mitochondrial processing peptidase alpha subunit, putative

Coordinates

chrA06:+:1125745..1128974

Molecular Weight (calculated)

54489.0 Da

IEP (calculated)

6.302

GRAVY (calculated)

-0.126

Length

506 amino acids

Sequence
(BLAST)

001: MYRTAASRAK ALKGSLSRGL APARYASSSA VATSSSSSSS SSGFFGWLTG GSSSSLNSLD MPLQGVSLPP PLADHVEPSK LKITTLPNGL KIASEMSPNP
101: VASIGLYVDC GSIYEAPYFH GATHLLERMA FKSTTNRSHL RLVREIEAIG GNTSASASRE QMSYTIDALK TYVPEMVEVL IDSVRNPAFL DWEVNEELRK
201: MKVEIAELAK NPMGLLMEAV HSAGYSGALA NPLYAHESAL DRLNGELLEE FMTENFTAAR MVLAASGVEH EELLQVVEPL TSDLPNVPRQ GEPKSQYTGG
301: DFRQHTGGEA THFALAFEVP GWNNEKEAVI ATVLQMLMGG GGSFSAGGPG KGVHSWLYLR ILNEYQQVQS CTAFTSIFKN TGLFGIYGCS SPEFAAKAIE
401: LAAKELKDVA GGKVNQKHLD RAKAATKSAV LMNLESRMIA AEDIGRQILT YGERKPVEQF LKTVDGLTLK DITDFTSKII SKPLTMGSFG EVLSVPSYDT
501: VSSKFC

Best Arabidopsis Sequence Match ( AT1G51980.1 )
(BLAST)

001: MYRTAASRAR ALKGVLTRSL RPARYASSSA VAETSSSTPA YLSWLSGGSR AALTSLDMPL QGVSLPPPLA DKVEPSKLQI TTLPNGLKIA SETTPNPAAS
101: IGLYVDCGSI YEAPYFHGAT HLLERMAFKS TLNRTHFRLV REIEAIGGNT SASASREQMS YTIDALKTYV PEMVEVLIDS VRNPAFLDWE VNEELRKMKV
201: EIAELAKNPM GFLLEAIHSA GYSGPLASPL YAPESALDRL NGELLEEFMT ENFTAARMVL AASGVEHEEL LKVAEPLTSD LPNVPPQLAP KSQYVGGDFR
301: QHTGGEATHF AVAFEVPGWN NEKEAVTATV LQMLMGGGGS FSAGGPGKGM HSWLYRRVLN EYQEVQSCTA FTSIFNDTGL FGIYGCSSPQ FAAKAIELAA
401: KELKDVAGGK VNQAHLDRAK AATKSAVLMN LESRMIAAED IGRQILTYGE RKPVDQFLKS VDQLTLKDIA DFTSKVISKP LTMGSFGDVL AVPSYDTISS
501: KFR

Arabidopsis Description

Probable mitochondrial-processing peptidase subunit alpha-1, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU25]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.