Factsheet for Zm00001d019992_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
cytoskeleton 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d007854_P002	Maize	extracellular	46.93	73.45
CDY69859	Canola	cytosol, mitochondrion, peroxisome	37.55	60.82
Zm00001d028194_P003	Maize	mitochondrion, plasma membrane, plastid	57.76	30.19
Zm00001d048102_P003	Maize	mitochondrion	56.32	29.43
GSMUA_Achr4P28020_001	Banana	mitochondrion	52.71	27.86
GSMUA_Achr7P00560_001	Banana	mitochondrion	51.99	27.59
GSMUA_Achr2P13550_001	Banana	mitochondrion	51.99	27.53
PGSC0003DMT400003437	Potato	mitochondrion	49.46	25.9
Bra021477.1-P	Field mustard	mitochondrion	47.65	25.05
VIT_01s0011g00740.t01	Wine grape	plastid	50.9	24.91
Bra039151.1-P	Field mustard	mitochondrion	46.93	24.57
Solyc02g088700.2.1	Tomato	plastid	44.04	22.93
GSMUA_Achr4P27960_001	Banana	extracellular	27.08	22.8
AT3G02090.2	Thale cress	mitochondrion	40.43	20.93
Zm00001d011706_P003	Maize	mitochondrion	29.6	17.26
GSMUA_Achr4P27970_001	Banana	cytosol	3.61	11.49
Zm00001d038776_P001	Maize	mitochondrion	18.05	9.47
Zm00001d041995_P002	Maize	mitochondrion	16.61	9.15
Zm00001d039505_P001	Maize	mitochondrion	16.61	9.11
Zm00001d011796_P002	Maize	mitochondrion	14.44	7.72
Zm00001d051210_P001	Maize	mitochondrion	7.22	5.9
Zm00001d025260_P001	Maize	mitochondrion	3.97	5.31

Protein Annotations

KEGG:00020+4.2.1.2	KEGG:00620+4.2.1.2	KEGG:00720+4.2.1.2	Gene3D:1.10.275.10	Gene3D:1.20.200.10	MapMan:2.3.7
Gene3D:3.30.830.10	UniProt:A0A1D6I1E9	InterPro:Fum_hydII	InterPro:Fumarase/histidase_N	InterPro:Fumarate_lyase_N	GO:GO:0003674
GO:GO:0003824	GO:GO:0004333	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006106	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0045239
GO:GO:0046872	InterPro:IPR024083	InterPro:L-Aspartase-like	InterPro:Metalloenz_LuxS/M16	ProteinID:ONM54039.1	PFAM:PF00206
PFAM:PF05193	PANTHER:PTHR11444	InterPro:Peptidase_M16_C	SUPFAM:SSF48557	SUPFAM:SSF63411	UniParc:UPI0008440B33
EnsemblPlantsGene:Zm00001d019992	EnsemblPlants:Zm00001d019992_P003	EnsemblPlants:Zm00001d019992_T003	:	:	:

Description

Probable mitochondrial-processing peptidase subunit beta mitochondrial

Coordinates

chr7:+:83426349..83431534

Molecular Weight (calculated)

31363.5 Da

IEP (calculated)

6.173

GRAVY (calculated)

-0.171

Length

277 amino acids

Sequence
(BLAST)

001: MDYGLDPTIG KAIIQAAEEV AEGKLDDHFP LVIWQTSSGT QSNMNANEVI ANRASEILGH KGGQKYVHPN DHVNRSQSSN DTFPTVMHIA TVVEILSRFI
101: PSLQQLHDSL HLKVLISVYR PDPHFPYSVT DHIFAMLPCF TVYNSELVQK AAINDIAESV MSFNMNYKDT GLFGVYAVAK ADCLDDLAFA IMHEMSKLSY
201: RVTEEDVIRA RNQLLTYGRR IPTPELFARI DDVDASTVKR VANRFIFDQD VAIAAMGPIQ GLPDYNWFRR RTYMLRY

Best Arabidopsis Sequence Match ( AT2G47510.1 )
(BLAST)

001: MSIYVASRRL SGGTTVTALR YATSLRSYST SFREERDTFG PIQVPSDKLW GAQTQRSLQN FEIGGERERM PEPIVRAFGV LKKCAAKVNM EYGLDPTIGK
101: AIMQAAQEVA EGKLNDHFPL VVWQTGSGTQ SNMNANEVIA NRAAEILGRK RGEKCVHPND HVNRSQSSND TFPTVMHIAA ATEINSRLIP SLKTLHSTLE
201: SKSFEFKDIV KIGRTHTQDA TPLTLGQEFG GYATQVKYGL NRVTCTLPRL YQLAQGGTAV GTGLNTKKGF DVKIAAAVAE ETNLPFVTAE NKFEALAAHD
301: ACVETSGSLN TIATSLMKIA NDIRFLGSGP RCGLGELVLP ENEPGSSIMP GKVNPTQCEA LTMVCAQVMG NHVAVTVGGS NGHFELNVFK PVIASALLHS
401: VRLIADASAS FEKNCVRGIE ANRERISKLL HESLMLVTSL NPKIGYDNAA AVAKKAHKEG CTLKEAALNL GVLTAEEFDT LVVPEKMIGP SD

Arabidopsis Description

FUM1FUM1 [Source:UniProtKB/TrEMBL;Acc:A0A178VMD4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.