Factsheet for GSMUA_Achr4P28020_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 9

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P00560_001	Banana	mitochondrion	93.51	93.87
GSMUA_Achr2P13550_001	Banana	mitochondrion	91.41	91.59
Zm00001d007854_P002	Maize	extracellular	27.67	81.92
CDY69859	Canola	cytosol, mitochondrion, peroxisome	26.14	80.12
PGSC0003DMT400003437	Potato	mitochondrion	77.86	77.13
EER95286	Sorghum	mitochondrion	76.72	75.85
Os03t0212700-01	Rice	mitochondrion	76.72	75.42
Bra039151.1-P	Field mustard	mitochondrion	75.19	74.48
Solyc02g088700.2.1	Tomato	plastid	75.38	74.25
Bra021477.1-P	Field mustard	mitochondrion	74.24	73.81
GSMUA_Achr4P27970_001	Banana	cytosol	12.21	73.56
TraesCS4A01G056200.2	Wheat	mitochondrion	73.66	72.83
TraesCS4D01G248100.2	Wheat	golgi, mitochondrion	73.66	72.69
TraesCS4B01G248700.2	Wheat	golgi, mitochondrion	73.28	72.45
AT3G02090.2	Thale cress	mitochondrion	71.95	70.47
GSMUA_Achr4P27960_001	Banana	extracellular	43.51	69.3
HORVU0Hr1G008980.1	Barley	cytosol	53.82	67.46
VIT_01s0011g00740.t01	Wine grape	plastid	71.76	66.43
HORVU4Hr1G068460.3	Barley	mitochondrion, plasma membrane	73.86	62.32
GSMUA_Achr4P08790_001	Banana	mitochondrion	44.27	61.87
Zm00001d019992_P003	Maize	cytosol	27.86	52.71
GSMUA_Achr7P13650_001	Banana	mitochondrion	27.1	28.01
GSMUA_Achr9P00130_001	Banana	mitochondrion	25.38	26.6
GSMUA_Achr8P30450_001	Banana	cytosol, mitochondrion, plastid	25.76	26.42

Protein Annotations

MapMan:18.10.2.2.2	MapMan:2.4.3.3.2	Gene3D:3.30.830.10	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0004222	GO:GO:0005488	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0019538	GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr4G28020_001	EnsemblPlants:GSMUA_Achr4P28020_001	EnsemblPlants:GSMUA_Achr4T28020_001	InterPro:IPR006311
UniProt:M0SSR4	InterPro:Metalloenz_LuxS/M16	PFAM:PF00675	PFAM:PF05193	ScanProsite:PS00143	PFscan:PS51318
PANTHER:PTHR11851	PANTHER:PTHR11851:SF133	InterPro:Pept_M16_N	InterPro:Pept_M16_Zn_BS	InterPro:Peptidase_M16_C	SUPFAM:SSF63411
InterPro:TAT_signal	UniParc:UPI000294CD7B	SEG:seg	:	:	:

Description

Probable mitochondrial-processing peptidase subunit beta [Source:GMGC_GENE;Acc:GSMUA_Achr4G28020_001]

Coordinates

chr4:-:26596618..26602540

Molecular Weight (calculated)

58270.6 Da

IEP (calculated)

6.406

GRAVY (calculated)

-0.233

Length

524 amino acids

Sequence
(BLAST)

001: MALRKLLTLS RRPLLVSGRF ASTAAVSALA NPAADAPSLA KPPVMHYDRL AEAVRSKIKR LDDPDPRFLR YASPHPTLAD HTPILAAPET RVTTLPNGLR
101: ISTESTLASR TATVGVWIDA GSRFETDETN GTAHFLEHMI FKGTESRTVR QLEEEIENMG GHLNAYTSRE QTTYYAKVLD KDVPKALEIL ADILQNSCFD
201: EKRIERERDV ILREMEEVEG QTEEVIFDHL HATAFQYTPL GRTILGPAQN IKTITKEHLK NYISTHYTAP RMVISAAGAV KHEDIVDQVK KLFANLSNDP
301: TTASQLVAKE PAIFTGSEVR IIDDDIPLAQ FAVAFSGASW IDPDSIALMV MQSMLGSWNK NTGSGKHMGS ELSQRIAINE IAESMMAFNT NYKDTGLFGV
401: YAIAKPDCLD DLAYAIMSEI SKLSYRVSEA DVTRARNQLK SSLQLHIDGT SPVAEDIGRQ ILTYGRRIPV AELFARIDAV DASTVKRVAN RFIFDQDVAI
501: AAMGPIQGLP DYNWFRRHTY LLRY

Best Arabidopsis Sequence Match ( AT3G02090.1 )
(BLAST)

001: MAMKNLLSLA RRSQRRLFLT QATRSSSSFS AIDSVPASAS PTALSPPPPH LMPYDHAAEI IKNKIKKLEN PDKRFLKYAS PHPILASHNH ILSAPETRVT
101: TLPNGLRVAT ESNLSAKTAT VGVWIDAGSR FESDETNGTA HFLEHMIFKG TDRRTVRALE EEIEDIGGHL NAYTSREQTT YYAKVLDSNV NQALDVLADI
201: LQNSKFEEQR INRERDVILR EMQEVEGQTD EVVLDHLHAT AFQYTPLGRT ILGPAQNVKS ITREDLQNYI KTHYTASRMV IAAAGAVKHE EVVEQVKKLF
301: TKLSSDPTTT SQLVANEPAS FTGSEVRMID DDLPLAQFAV AFEGASWTDP DSVALMVMQT MLGSWNKNVG GGKHVGSDLT QRVAINEIAE SIMAFNTNYK
401: DTGLFGVYAV AKADCLDDLS YAIMYEVTKL AYRVSDADVT RARNQLKSSL LLHMDGTSPI AEDIGRQLLT YGRRIPTAEL FARIDAVDAS TVKRVANKYI
501: YDKDIAISAI GPIQDLPDYN KFRRRTYWNR Y

Arabidopsis Description

MPPBETAInsulinase (Peptidase family M16) protein [Source:TAIR;Acc:AT3G02090]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.