Factsheet for TraesCS4A01G056200.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

plastid: 16595579
mitochondrion: 21043471
golgi: 25769308
unclear: 25769308
nucleus: 26228564

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

msms PMID: 26228564 doi

E Bancel, T Bonnot, M Davanture, G Branlard, M Zivy, P Martre

Blaise Pascal University, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Avenue des Landais, F-63 170 Aubière, France., CNRS, PAPPSO, UMR 0320/8120 Génétique Quantitative et Évolution - Le Moulon, F-91190 Gif-sur-Yvette, France., INRA, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, 5 chemin de Beaulieu, F-63 039 Clermont-Ferrand, France.

msms PMID: 21043471 doi

RP Jacoby, AH Millar, NL Taylor

ARC Centre of Excellence in Plant Energy Biology & Centre for Comparative Analysis of Biomolecular Networks, M316, The University of Western Australia, 35 Stirling Highway, Crawley,WA 6009, Australia.

msms PMID: 16595579 doi

Y Balmer, WH Vensel, FM DuPont, BB Buchanan, WJ Hurkman

Department of Plant and Microbial Biology, University of California, 111 Koshland Hall, Berkeley, CA 94720, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G248100.2	Wheat	golgi, mitochondrion	98.68	98.49
TraesCS4B01G248700.2	Wheat	golgi, mitochondrion	98.11	98.11
Zm00001d048102_P003	Maize	mitochondrion	88.3	88.3
Os03t0212700-01	Rice	mitochondrion	88.3	87.8
Zm00001d028194_P003	Maize	mitochondrion, plasma membrane, plastid	86.79	86.79
EER95286	Sorghum	mitochondrion	86.79	86.79
HORVU0Hr1G008980.1	Barley	cytosol	68.3	86.6
HORVU4Hr1G068460.3	Barley	mitochondrion, plasma membrane	95.85	81.8
CDY69859	Canola	cytosol, mitochondrion, peroxisome	24.34	75.44
VIT_14s0108g01650.t01	Wine grape	plastid	70.57	74.95
GSMUA_Achr7P00560_001	Banana	mitochondrion	73.58	74.71
GSMUA_Achr4P28020_001	Banana	mitochondrion	72.83	73.66
GSMUA_Achr2P13550_001	Banana	mitochondrion	72.45	73.42
KRG99600	Soybean	mitochondrion	71.32	71.73
KRH46614	Soybean	mitochondrion	71.13	71.4
KRH07415	Soybean	mitochondrion	70.38	71.32
Bra039151.1-P	Field mustard	mitochondrion	67.36	67.49
CDY37550	Canola	mitochondrion	67.36	67.49
CDY34703	Canola	mitochondrion	67.17	67.42
Bra021477.1-P	Field mustard	mitochondrion	66.79	67.17
CDY43262	Canola	mitochondrion	66.79	66.92
PGSC0003DMT400003437	Potato	mitochondrion	66.23	66.35
PGSC0003DMT400072957	Potato	mitochondrion	66.6	66.23
Solyc05g012480.2.1	Tomato	plastid	66.23	65.85
AT3G02090.2	Thale cress	mitochondrion	64.15	63.55
Solyc02g088700.2.1	Tomato	plastid	63.58	63.35
VIT_01s0011g00740.t01	Wine grape	plastid	65.28	61.13
GSMUA_Achr4P27970_001	Banana	cytosol	10.0	60.92
CDY55794	Canola	mitochondrion	36.04	60.06
GSMUA_Achr4P27960_001	Banana	extracellular	34.53	55.62
TraesCS3A01G250400.1	Wheat	mitochondrion	51.7	54.47
TraesCS3A01G516600.1	Wheat	mitochondrion	25.66	26.98
TraesCS3A01G107500.3	Wheat	golgi, nucleus	23.96	25.15
TraesCS3A01G277600.1	Wheat	mitochondrion	25.85	24.25

Protein Annotations

MapMan:18.10.2.2.2	MapMan:2.4.3.3.2	Gene3D:3.30.830.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004222
GO:GO:0005488	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0019538
GO:GO:0046872	InterPro:Metalloenz_LuxS/M16	PFAM:PF00675	PFAM:PF05193	ScanProsite:PS00143	PANTHER:PTHR11851
PANTHER:PTHR11851:SF133	InterPro:Pept_M16_N	InterPro:Pept_M16_Zn_BS	InterPro:Peptidase_M16_C	SUPFAM:SSF63411	EnsemblPlantsGene:TraesCS4A01G056200
EnsemblPlants:TraesCS4A01G056200.2	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:47101709..47105798

Molecular Weight (calculated)

58525.9 Da

IEP (calculated)

6.258

GRAVY (calculated)

-0.182

Length

530 amino acids

Sequence
(BLAST)

001: MAFRRLLSAA VRRRSAAAAA AVGNAREAST AVAAGLGAIA PDAPAVRAPV MAYDRIADAV NARVRRLEHP DPRFLRYASP VPVHVDHTAI LEAPETRVTT
101: LDNGLRVATE SSLSSRTATV GVWIDAGSRY ETEEAAGVAH FVEHMLFKGT GTRSAGQLEQ EIEDMGGHLN AYTSREQTTY YAKVLDKDVP RAMSVLADIL
201: QDSKLEDNRI ERERGVILRE MEEVQGQSEE VIFDHLHATA FQYTSLGRPI LGSADNVKSI TKKNLIDYIQ KHYTASRMVI TAAGAVKHDD IVQQAKELFK
301: SLPTDPTTTN MLVAEQPAIF TGSEVRIIDD DMPLAQFAVA FNGASWTDPD SIALMVMQTM LGSWNKSAGG GKHMGSELVQ RVAINEIAES IMAFNTNYKD
401: TGLFGVYAVA KADCLDDLAF AIMQEMSKLS YRVTEEDVIR ARNQLKSSIQ LHLDGSTAVV EDIGRQQLIY GRRIPIPELF ARIDAVDPST IRRVANRFIF
501: DQDIAIAAMG PIKSLPDYNW FRRRTYMLRY

Best Arabidopsis Sequence Match ( AT3G02090.1 )
(BLAST)

001: MAMKNLLSLA RRSQRRLFLT QATRSSSSFS AIDSVPASAS PTALSPPPPH LMPYDHAAEI IKNKIKKLEN PDKRFLKYAS PHPILASHNH ILSAPETRVT
101: TLPNGLRVAT ESNLSAKTAT VGVWIDAGSR FESDETNGTA HFLEHMIFKG TDRRTVRALE EEIEDIGGHL NAYTSREQTT YYAKVLDSNV NQALDVLADI
201: LQNSKFEEQR INRERDVILR EMQEVEGQTD EVVLDHLHAT AFQYTPLGRT ILGPAQNVKS ITREDLQNYI KTHYTASRMV IAAAGAVKHE EVVEQVKKLF
301: TKLSSDPTTT SQLVANEPAS FTGSEVRMID DDLPLAQFAV AFEGASWTDP DSVALMVMQT MLGSWNKNVG GGKHVGSDLT QRVAINEIAE SIMAFNTNYK
401: DTGLFGVYAV AKADCLDDLS YAIMYEVTKL AYRVSDADVT RARNQLKSSL LLHMDGTSPI AEDIGRQLLT YGRRIPTAEL FARIDAVDAS TVKRVANKYI
501: YDKDIAISAI GPIQDLPDYN KFRRRTYWNR Y

Arabidopsis Description

MPPBETAInsulinase (Peptidase family M16) protein [Source:TAIR;Acc:AT3G02090]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.