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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 2
  • mitochondrion 9
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:mitochondrion, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:mitochondrion
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:mitochondrion
plastid: 20363867
plastid: 22908117
plastid: 26371478
unclear: 26455813
nucleus: 28394025
endoplasmic reticulum: 29145071
extracellular: 29876421
msms PMID: 28394025 doi
AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
msms PMID: 22908117 doi
C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech
Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.
msms PMID: 20363867 doi
C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech
Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.
msms PMID: 29876421 doi
L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
msms PMID: 26371478 doi
M Suzuki, S Takahashi, T Kondo, H Dohra, Y Ito, Y Kiriiwa, M Hayashi, S Kamiya, M Kato, M Fujiwara, Y Fukao, M Kobayashi, N Nagata, R Motohashi
Faculty of Agriculture, Shizuoka University, Shizuoka city, Shizuoka, Japan., Faculty of Science, Japan Woman's University, Bunkyo-ku, Tokyo, Japan., Instrumental Research Support Office, Research Institute of Green Science and Technology, Shizuoka University, Shizuoka city, Shizuoka, Japan., The Plant Science Education Unit, Nara Institute of Science and Technology, Ikoma city, Nara, Japan.
msms PMID: 29145071 doi
P Ibort, H Imai, M Uemura, R Aroca
Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: pablo.ibort@eez.csic.es., Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: raroca@eez.csic.es., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: u0414004@iwate-u.ac.jp., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: uemura@iwate-u.ac.jp.
msms PMID: 26455813 doi
P Paul, P Chaturvedi, M Selymesi, A Ghatak, A Mesihovic, KD Scharf, W Weckwerth, S Simm, E Schleiff
Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400072957 Potato mitochondrion 99.06 99.06
VIT_14s0108g01650.t01 Wine grape plastid 73.92 78.96
KRH07415 Soybean mitochondrion 72.8 74.19
KRG99600 Soybean mitochondrion 72.8 73.62
KRH46614 Soybean mitochondrion 72.8 73.48
Solyc02g088700.2.1 Tomato plastid 71.48 71.62
Bra039151.1-P Field mustard mitochondrion 70.36 70.89
Bra021477.1-P Field mustard mitochondrion 69.98 70.78
Os03t0212700-01 Rice mitochondrion 67.92 67.92
AT3G02090.2 Thale cress mitochondrion 67.73 67.48
EER95286 Sorghum mitochondrion 66.79 67.17
TraesCS4D01G248100.2 Wheat golgi, mitochondrion 66.23 66.48
TraesCS4B01G248700.2 Wheat golgi, mitochondrion 66.04 66.42
TraesCS4A01G056200.2 Wheat mitochondrion 65.85 66.23
HORVU0Hr1G008980.1 Barley cytosol 49.53 63.16
HORVU4Hr1G068460.3 Barley mitochondrion, plasma membrane 66.04 56.68
Solyc12g008630.1.1 Tomato plastid 25.14 26.59
Solyc05g026150.1.1 Tomato cytosol, extracellular, mitochondrion 6.57 21.47
Protein Annotations
MapMan:18.10.2.2.2MapMan:2.4.3.3.2Gene3D:3.30.830.10ncoils:CoilGO:GO:0003674GO:GO:0003824
GO:GO:0004222GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005739GO:GO:0005750GO:GO:0006091GO:GO:0006122GO:GO:0006139GO:GO:0006508
GO:GO:0008150GO:GO:0008152GO:GO:0008270GO:GO:0009060GO:GO:0009987GO:GO:0016020
GO:GO:0016485GO:GO:0016787GO:GO:0019538GO:GO:0046872UniProt:K4BXX0MEROPS:M16.003
InterPro:Metalloenz_LuxS/M16PFAM:PF00675PFAM:PF05193ScanProsite:PS00143PANTHER:PTHR11851PANTHER:PTHR11851:SF133
InterPro:Pept_M16_NInterPro:Pept_M16_Zn_BSInterPro:Peptidase_M16_CSUPFAM:SSF63411EnsemblPlantsGene:Solyc05g012480.2EnsemblPlants:Solyc05g012480.2.1
UniParc:UPI000276569FSEG:seg::::
Description
No Description!
Coordinates
chr5:-:5715224..5720976
Molecular Weight (calculated)
59585.0 Da
IEP (calculated)
6.584
GRAVY (calculated)
-0.317
Length
533 amino acids
Sequence
(BLAST)
001: MATRHLLNLT RRRSRITPFT VLPPCITFSS RSSTSITNPS QSPSLPSPPP PDAMIYDRLA EQVKSKIKRL EDPNPRFLKY NSPDPTVADH TSILSAPETK
101: VTTLPNGLRV ATESNLSSQT ATVGVWIDAG SRFETEENNG VAHFLEHMIF KGTEKRPIRA LEEEIENMGG HLNAYTSREQ TTYFAKVLGS DVPKAVDILG
201: DILQNSLLEE DKIIRERSVI LREMEEVEKQ PEEVIFDQLH TTAFQYTPLG RTILGPAQNI EKMTRAHIQD YISTHYGAHR MVISAAGAVK HEEVVELVKK
301: HFTKLSSNPI TTSQLVSEEP AIFTGSEIRI IDDDLPLAQF AVAFSGASWT DPDSIALMVM QQMLGSWSKS SGGGKHMGSE LVQRVAINEL AESVMAFNTN
401: YKDTGLFGVY AEAKPDCLSD LAYVIMNGIC KLSYKVSDAD VVRARNQLKS SLMLHIDGSG PTAEDIGRQL ITYGRRIPYA ELFSRIDSVD AGTIKRVANR
501: FIFDRDVAIS ARGPIQDLPD YNWFRRRTYW LRY
Best Arabidopsis Sequence Match ( AT3G02090.1 )
(BLAST)
001: MAMKNLLSLA RRSQRRLFLT QATRSSSSFS AIDSVPASAS PTALSPPPPH LMPYDHAAEI IKNKIKKLEN PDKRFLKYAS PHPILASHNH ILSAPETRVT
101: TLPNGLRVAT ESNLSAKTAT VGVWIDAGSR FESDETNGTA HFLEHMIFKG TDRRTVRALE EEIEDIGGHL NAYTSREQTT YYAKVLDSNV NQALDVLADI
201: LQNSKFEEQR INRERDVILR EMQEVEGQTD EVVLDHLHAT AFQYTPLGRT ILGPAQNVKS ITREDLQNYI KTHYTASRMV IAAAGAVKHE EVVEQVKKLF
301: TKLSSDPTTT SQLVANEPAS FTGSEVRMID DDLPLAQFAV AFEGASWTDP DSVALMVMQT MLGSWNKNVG GGKHVGSDLT QRVAINEIAE SIMAFNTNYK
401: DTGLFGVYAV AKADCLDDLS YAIMYEVTKL AYRVSDADVT RARNQLKSSL LLHMDGTSPI AEDIGRQLLT YGRRIPTAEL FARIDAVDAS TVKRVANKYI
501: YDKDIAISAI GPIQDLPDYN KFRRRTYWNR Y
Arabidopsis Description
MPPBETAInsulinase (Peptidase family M16) protein [Source:TAIR;Acc:AT3G02090]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.