Factsheet for Solyc02g088700.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 2
mitochondrion 9

Predictors

GFP

MS/MS

Papers

plastid: 20363867
plastid: 22908117
nucleus: 25464976
unclear: 26455813
nucleus: 28394025
endoplasmic reticulum: 29145071

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

msms PMID: 29145071 doi

P Ibort, H Imai, M Uemura, R Aroca

Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: pablo.ibort@eez.csic.es., Departamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín (EEZ-CSIC), Profesor Albareda 1, 18008 Granada, Spain. Electronic address: raroca@eez.csic.es., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: u0414004@iwate-u.ac.jp., United Graduate School of Agricultural Sciences, Iwate University, Morioka, Iwate 020-8550, Japan; Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, 3-18-8 Ueda, Morioka, Iwate 020-8550, Japan. Electronic address: uemura@iwate-u.ac.jp.

msms PMID: 26455813 doi

P Paul, P Chaturvedi, M Selymesi, A Ghatak, A Mesihovic, KD Scharf, W Weckwerth, S Simm, E Schleiff

Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.

msms PMID: 25464976 doi

Y Wang, W Wang, J Cai, Y Zhang, G Qin, S Tian

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400003437	Potato	mitochondrion	94.55	95.09
GSMUA_Achr7P00560_001	Banana	mitochondrion	74.81	76.25
GSMUA_Achr2P13550_001	Banana	mitochondrion	74.62	75.91
GSMUA_Achr4P28020_001	Banana	mitochondrion	74.25	75.38
Solyc05g012480.2.1	Tomato	plastid	71.62	71.48
Bra039151.1-P	Field mustard	mitochondrion	70.49	70.89
Bra021477.1-P	Field mustard	mitochondrion	69.92	70.59
CDY69859	Canola	cytosol, mitochondrion, peroxisome	22.56	70.18
Zm00001d007854_P002	Maize	extracellular	22.56	67.8
AT3G02090.2	Thale cress	mitochondrion	68.05	67.66
Os03t0212700-01	Rice	mitochondrion	65.98	65.85
GSMUA_Achr4P27970_001	Banana	cytosol	10.71	65.52
EER95286	Sorghum	mitochondrion	64.66	64.91
TraesCS4A01G056200.2	Wheat	mitochondrion	63.35	63.58
TraesCS4D01G248100.2	Wheat	golgi, mitochondrion	63.35	63.47
TraesCS4B01G248700.2	Wheat	golgi, mitochondrion	62.97	63.21
VIT_01s0011g00740.t01	Wine grape	plastid	65.23	61.31
GSMUA_Achr4P27960_001	Banana	extracellular	36.84	59.57
HORVU0Hr1G008980.1	Barley	cytosol	44.92	57.18
HORVU4Hr1G068460.3	Barley	mitochondrion, plasma membrane	63.35	54.27
Zm00001d019992_P003	Maize	cytosol	22.93	44.04
Solyc12g008630.1.1	Tomato	plastid	23.68	25.0
Solyc05g026150.1.1	Tomato	cytosol, extracellular, mitochondrion	6.02	19.63

Protein Annotations

MapMan:18.10.2.2.2	MapMan:2.4.3.3.2	Gene3D:3.30.830.10	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0004222	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005739	GO:GO:0005750	GO:GO:0006091	GO:GO:0006122	GO:GO:0006139	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008270	GO:GO:0009060	GO:GO:0009987	GO:GO:0016020
GO:GO:0016485	GO:GO:0016787	GO:GO:0019538	GO:GO:0046872	UniProt:K4BC25	MEROPS:M16.003
InterPro:Metalloenz_LuxS/M16	PFAM:PF00675	PFAM:PF05193	ScanProsite:PS00143	PANTHER:PTHR11851	PANTHER:PTHR11851:SF133
InterPro:Pept_M16_N	InterPro:Pept_M16_Zn_BS	InterPro:Peptidase_M16_C	SUPFAM:SSF63411	EnsemblPlantsGene:Solyc02g088700.2	EnsemblPlants:Solyc02g088700.2.1
UniParc:UPI000276889C	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr2:+:50690328..50695668

Molecular Weight (calculated)

59251.7 Da

IEP (calculated)

6.401

GRAVY (calculated)

-0.250

Length

532 amino acids

Sequence
(BLAST)

001: MTIRQLLTLA RRSRNLSSSH SLRRLSSASA AVAATSSSAP AIGPPPPDAM IYDRLAEDVK RKIKRLENPD SRFLQYNSPH PTLADHTSIL SFPSTRVTTL
101: PSGLRVATET NLAVKTATVG VFIDAGSRFE TDETNGTAHF LEHMIFKGTE KRTSWEMEEE IENMGGHLNA YTSREQTAYY AKVLDNDVPV ALDILADILQ
201: NSKFEEKKIE RERDVILREM EEVEGQTEEV IFDHLHSTAF QYSPLGRTIL GPAQNIKTIT RSHLKDYIST HYTAPRMVIV ASGPVKHEEF VEQVKKQFTK
301: LSTNPSTASE LVAREPAIFT GSEVRVIDDD IPLAQFAVAF QGAPWTDPDA IPLMVMQSML GTWNKNAGGG KHMGSDLAQS VGINELAESH DVFLTPTIRI
401: LVCSGVVCCC KSEPDCLSDL SYCIMREISK LCYRVSDADV TRACNQLKSS LMLHIDGTSP VAEDIGRQLL TYGRRIPATE LFARVDAVDA STIKRVANRF
501: IFDQDVAISA LGPIQTLPDY NWFRRRTYML RY

Best Arabidopsis Sequence Match ( AT3G02090.1 )
(BLAST)

001: MAMKNLLSLA RRSQRRLFLT QATRSSSSFS AIDSVPASAS PTALSPPPPH LMPYDHAAEI IKNKIKKLEN PDKRFLKYAS PHPILASHNH ILSAPETRVT
101: TLPNGLRVAT ESNLSAKTAT VGVWIDAGSR FESDETNGTA HFLEHMIFKG TDRRTVRALE EEIEDIGGHL NAYTSREQTT YYAKVLDSNV NQALDVLADI
201: LQNSKFEEQR INRERDVILR EMQEVEGQTD EVVLDHLHAT AFQYTPLGRT ILGPAQNVKS ITREDLQNYI KTHYTASRMV IAAAGAVKHE EVVEQVKKLF
301: TKLSSDPTTT SQLVANEPAS FTGSEVRMID DDLPLAQFAV AFEGASWTDP DSVALMVMQT MLGSWNKNVG GGKHVGSDLT QRVAINEIAE SIMAFNTNYK
401: DTGLFGVYAV AKADCLDDLS YAIMYEVTKL AYRVSDADVT RARNQLKSSL LLHMDGTSPI AEDIGRQLLT YGRRIPTAEL FARIDAVDAS TVKRVANKYI
501: YDKDIAISAI GPIQDLPDYN KFRRRTYWNR Y

Arabidopsis Description

MPPBETAInsulinase (Peptidase family M16) protein [Source:TAIR;Acc:AT3G02090]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.