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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d000189_P001 Maize plasma membrane 57.42 62.09
Zm00001d002712_P001 Maize plastid 44.54 59.57
KXG27824 Sorghum plasma membrane 52.06 51.5
KXG39012 Sorghum plasma membrane 51.34 50.62
VIT_14s0108g00370.t01 Wine grape plasma membrane, vacuole 14.4 44.85
KRH76233 Soybean cytosol 12.25 43.91
OQU88155 Sorghum plasma membrane 17.98 43.13
GSMUA_Achr4P29260_001 Banana plasma membrane 29.07 42.59
CDY37095 Canola cytosol, plasma membrane, vacuole 20.48 42.33
CDX73350 Canola cytosol 27.55 41.29
KRH23856 Soybean plasma membrane 34.7 41.1
PGSC0003DMT400055412 Potato plasma membrane 30.05 41.08
KRH40148 Soybean plasma membrane 14.67 41.0
KRH23852 Soybean plasma membrane 34.35 40.63
Bra034404.1-P Field mustard cytosol 33.09 40.57
Solyc04g074000.2.1 Tomato plasma membrane 37.48 40.41
PGSC0003DMT400045658 Potato plasma membrane 37.39 40.31
Solyc04g074050.2.1 Tomato plasma membrane 29.16 40.0
PGSC0003DMT400071877 Potato plasma membrane 34.79 39.98
PGSC0003DMT400071897 Potato plasma membrane 36.05 39.86
Solyc04g074030.2.1 Tomato plasma membrane 32.47 39.85
VIT_04s0079g00240.t01 Wine grape plasma membrane 26.21 39.81
VIT_14s0066g02670.t01 Wine grape plasma membrane, vacuole 25.49 39.75
AT4G08850.1 Thale cress plasma membrane 37.03 39.62
PGSC0003DMT400016372 Potato plasma membrane 35.6 39.6
VIT_14s0066g02680.t01 Wine grape cytosol 26.83 39.58
CDX90696 Canola plasma membrane 27.01 39.53
VIT_10s0042g00600.t01 Wine grape plasma membrane 27.46 39.21
CDY05028 Canola plasma membrane 35.96 39.11
PGSC0003DMT400031288 Potato plasma membrane 35.24 39.05
Bra000657.1-P Field mustard plasma membrane 35.87 39.01
PGSC0003DMT400056711 Potato plasma membrane 11.99 38.84
VIT_14s0108g00300.t01 Wine grape plasma membrane 27.19 38.83
Solyc04g074020.2.1 Tomato plasma membrane 32.11 38.48
KRH01151 Soybean plasma membrane 27.28 38.27
VIT_14s0066g02660.t01 Wine grape plasma membrane 26.57 37.93
VIT_10s0042g00700.t01 Wine grape plasma membrane 28.26 37.49
PGSC0003DMT400033812 Potato cytosol 29.61 37.19
PGSC0003DMT400045689 Potato cytosol, plasma membrane, plastid 21.47 36.92
KXG38367 Sorghum plasma membrane 40.16 36.8
VIT_10s0042g00770.t01 Wine grape plasma membrane 28.62 36.61
VIT_14s0108g00340.t01 Wine grape plasma membrane 28.26 35.99
KRH01105 Soybean plasma membrane 26.57 35.91
AT1G35710.1 Thale cress plasma membrane 35.42 35.36
KRH65266 Soybean plasma membrane 33.72 35.2
KRH65315 Soybean plasma membrane 25.76 34.78
KRH01108 Soybean plasma membrane 24.06 34.27
KRH65306 Soybean cytosol 20.3 33.83
KRH01110 Soybean plasma membrane 23.79 33.71
KRH01111 Soybean plasma membrane 26.3 33.64
KRH01112 Soybean plasma membrane 26.12 33.49
KRH01301 Soybean cytosol, plasma membrane 24.51 32.24
KRH01109 Soybean cytosol 23.88 29.6
PGSC0003DMT400071885 Potato cytosol, nucleus, plasma membrane 33.54 29.23
VIT_14s0108g00280.t01 Wine grape plasma membrane 26.83 21.05
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.12Gene3D:3.30.200.20Gene3D:3.80.10.10UniProt:A0A1W0W2T5GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538InterPro:IPR000719
InterPro:IPR001611InterPro:IPR032675InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtypEnsemblPlants:OQU88704ProteinID:OQU88704ProteinID:OQU88704.1PFAM:PF00069PFAM:PF00560
PFAM:PF08263PFAM:PF13855ScanProsite:PS00107ScanProsite:PS00109PFscan:PS50011PANTHER:PTHR27000
InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00365SMART:SM00369EnsemblPlantsGene:SORBI_3002G077400SUPFAM:SSF52058
SUPFAM:SSF56112SignalP:SignalP-noTMTMHMM:TMhelixInterPro:Tyr_kinase_ASUniParc:UPI0009DC880ESEG:seg
Description
hypothetical protein
Coordinates
chr2:-:8061094..8064815
Molecular Weight (calculated)
122737.0 Da
IEP (calculated)
6.867
GRAVY (calculated)
0.007
Length
1118 amino acids
Sequence
(BLAST)
0001: MIELIILVLL RSCLVFLHAD AAGHHGGVHL GSQTAALLQW KSTLRNSPPA MDSWQQGTSP CSSNWSGVAC AAVHRGRRAP LTVTKISLPN AGLDGYLGEL
0101: NFSTLPFLTH IDLSYNSLHG GIPLSITSLP ALNYLDLGGN WLNGNIPSEL GSMASLSYLG LDYNNLTGHI PASLGNLTRL VTLSTEQNLL SGPIPEELGK
0201: LTSLEILDLG QNSLGGRIPK ILGNLTKLSN LSLTNVGLDG YLGEFNFSTL PLLTHIDLSY NSLHGEIPLS ITSLTALSYL DLGFNWLHGS IPSEFGNMPC
0301: LNQMGFSRNN LTGQIPKSFG NLTKLNILHL DSNNFSGPIP HEISLLPNLR KLDLHFNQLS GPIPPSMGNL TMLKLINLGD NRLVGSIPAE IGALVHLDSL
0401: YLSMNKISGS IPASFMNLTS IGDLRLFINN LSGPLPRGFT NFTYLRWMEL GDNSLSGELP SDVCKGGNLQ KFAVSRNMFT GPIPRSLQTC RSLKFLGLGS
0501: NNLTGDISSF GPYPRLVQAT LYKNNFFGYL SKTWASNINL TFLAMEENMI TGSLPPEFSN LEKLEVLTIH DNNLTGSIPE AFSNLANLYL LNLSKNKLSG
0601: NIPPEFGQLK NLQYLDISAN KLSGSIPQEL SGCTKLISLS INDNNLSGPL PTTIGSLGGL QMLFDVSKNK LTGKLPVELG NLVMLEILNL SHNQFSGSIP
0701: SSIGSMSSLS ALDVSYNDLE GPLPTGQLFN NASAKWFLHN KGLCGNISGL PECSSTPIKE YHKSSLHHLV LVTSIPMCIV IILSIVVLAM ILRRRKRPQI
0801: TAVRNTRDVL SVWNFDGKLV FEDITRATEN FSDSYIIGEG GFGTVYKAQL QGGRLVAVKK LHPTEEGISD EKRFLSEIEV LTKIRHRSIV KLYGFCSHPR
0901: YQFLVYDYIE RGNLHITLEN EDLAKELNWK KRVAIVRDVA QAILYLHHEC NPPIIHRDIT SNNILLDATF KAYVSDFGIA RMLKPDSSNW SELAGTYGYI
1001: APELSYTSVV TTKCDVYSFG VVALEIVMGR YPREVQSIAS MEQHHELAIE DLLDQRLSSP TIMEKKEISL LVELAFACLQ TSPQFRPEMQ DVYHKIALHK
1101: PPFVSLSHEH TPEEIING
Best Arabidopsis Sequence Match ( AT4G08850.1 )
(BLAST)
0001: MNKTNPERKI SLTSFKERMA CKEKPRDLQV LLIISIVLSC SFAVSATVEE ANALLKWKST FTNQTSSSKL SSWVNPNTSS FCTSWYGVAC SLGSIIRLNL
0101: TNTGIEGTFE DFPFSSLPNL TFVDLSMNRF SGTISPLWGR FSKLEYFDLS INQLVGEIPP ELGDLSNLDT LHLVENKLNG SIPSEIGRLT KVTEIAIYDN
0201: LLTGPIPSSF GNLTKLVNLY LFINSLSGSI PSEIGNLPNL RELCLDRNNL TGKIPSSFGN LKNVTLLNMF ENQLSGEIPP EIGNMTALDT LSLHTNKLTG
0301: PIPSTLGNIK TLAVLHLYLN QLNGSIPPEL GEMESMIDLE ISENKLTGPV PDSFGKLTAL EWLFLRDNQL SGPIPPGIAN STELTVLQLD TNNFTGFLPD
0401: TICRGGKLEN LTLDDNHFEG PVPKSLRDCK SLIRVRFKGN SFSGDISEAF GVYPTLNFID LSNNNFHGQL SANWEQSQKL VAFILSNNSI TGAIPPEIWN
0501: MTQLSQLDLS SNRITGELPE SISNINRISK LQLNGNRLSG KIPSGIRLLT NLEYLDLSSN RFSSEIPPTL NNLPRLYYMN LSRNDLDQTI PEGLTKLSQL
0601: QMLDLSYNQL DGEISSQFRS LQNLERLDLS HNNLSGQIPP SFKDMLALTH VDVSHNNLQG PIPDNAAFRN APPDAFEGNK DLCGSVNTTQ GLKPCSITSS
0701: KKSHKDRNLI IYILVPIIGA IIILSVCAGI FICFRKRTKQ IEEHTDSESG GETLSIFSFD GKVRYQEIIK ATGEFDPKYL IGTGGHGKVY KAKLPNAIMA
0801: VKKLNETTDS SISNPSTKQE FLNEIRALTE IRHRNVVKLF GFCSHRRNTF LVYEYMERGS LRKVLENDDE AKKLDWGKRI NVVKGVAHAL SYMHHDRSPA
0901: IVHRDISSGN ILLGEDYEAK ISDFGTAKLL KPDSSNWSAV AGTYGYVAPE LAYAMKVTEK CDVYSFGVLT LEVIKGEHPG DLVSTLSSSP PDATLSLKSI
1001: SDHRLPEPTP EIKEEVLEIL KVALLCLHSD PQARPTMLSI STAFS
Arabidopsis Description
MIK2MDIS1-interacting receptor like kinase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZG8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.