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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d032745_P001 Maize plasma membrane 88.69 88.47
Zm00001d014063_P001 Maize plasma membrane 88.44 86.04
TraesCS1A01G149700.1 Wheat plasma membrane 76.31 76.37
TraesCS1D01G146900.1 Wheat plasma membrane 75.9 76.03
HORVU1Hr1G039370.1 Barley plasma membrane 75.82 76.01
Os10t0468500-01 Rice plasma membrane 74.92 75.35
TraesCS1B01G167700.1 Wheat plasma membrane, plastid 76.8 72.41
GSMUA_Achr5P20440_001 Banana plasma membrane, vacuole 46.31 62.85
VIT_07s0005g04060.t01 Wine grape cytosol 28.36 61.24
GSMUA_Achr9P18790_001 Banana plasma membrane 43.36 60.6
VIT_07s0005g04020.t01 Wine grape plasma membrane 52.7 52.75
Solyc09g072810.2.1 Tomato plasma membrane 52.21 52.26
VIT_07s0005g04050.t01 Wine grape plasma membrane 52.13 52.17
VIT_07s0005g04100.t01 Wine grape plasma membrane 49.67 52.06
PGSC0003DMT400009696 Potato plasma membrane 51.64 51.68
VIT_07s0005g04040.t01 Wine grape plasma membrane 51.56 51.6
KRH67434 Soybean cytosol 33.85 50.43
KRG95718 Soybean plasma membrane 50.41 50.0
KRH67435 Soybean plasma membrane 49.51 49.15
KRH67440 Soybean plasma membrane 49.02 48.62
VIT_07s0005g04070.t01 Wine grape plasma membrane 34.43 47.51
KRG95717 Soybean plasma membrane 48.03 47.49
OQU88704 Sorghum plasma membrane 36.8 40.16
KXG27824 Sorghum plasma membrane 36.31 39.2
KXG39012 Sorghum plasma membrane 36.31 39.07
OQU88155 Sorghum plasma membrane 14.02 36.7
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.12Gene3D:3.30.200.20Gene3D:3.80.10.10UniProt:A0A1B6QKC6GO:GO:0000166
GO:GO:0003674GO:GO:0003824GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524
GO:GO:0005575GO:GO:0006464GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016020GO:GO:0016021GO:GO:0016301GO:GO:0016740GO:GO:0019538InterPro:IPR000719
InterPro:IPR001611InterPro:IPR032675EnsemblPlants:KXG38367ProteinID:KXG38367ProteinID:KXG38367.1InterPro:Kinase-like_dom_sf
InterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtypPFAM:PF00069PFAM:PF08263
PFAM:PF13855PRINTS:PR00019ScanProsite:PS00107ScanProsite:PS00109PFscan:PS50011PANTHER:PTHR27000
PANTHER:PTHR27000:SF227InterPro:Prot_kinase_domInterPro:Protein_kinase_ATP_BSSMART:SM00220SMART:SM00369EnsemblPlantsGene:SORBI_3001G224000
SUPFAM:SSF52047SUPFAM:SSF52058SUPFAM:SSF56112SignalP:SignalP-noTMTMHMM:TMhelixInterPro:Tyr_kinase_AS
UniParc:UPI00081ADBE4SEG:seg::::
Description
hypothetical protein
Coordinates
chr1:-:21454934..21459254
Molecular Weight (calculated)
130584.0 Da
IEP (calculated)
5.384
GRAVY (calculated)
0.037
Length
1220 amino acids
Sequence
(BLAST)
0001: MPTPPPAPSR LLLAAPLLAI LALAAVAANA NAATPPSPAD ALLAWKSNLG DPAALSTWTN ATQVSICTTW RGVACDAAGR VVSLRLRGLG LTGGLDELDP
0101: AAFPSLTSLD LKDNNLAGAI PASFSQLPAL STLDLGSNGL NGTIPPQLGD LSGLVELRLF NNNLVGAIPH QLSKLPKIVQ LDLGSNYLTS APFSPMPMVE
0201: FLSLSLNYLN GSFPEFVLSS GNITYLDLSQ NAFSGPIPDA LPERLPNLRW LNLSANAFSG RIPASLARLT SLRDLHLGGN GLTGGVPDFL GSMSQLRVLE
0301: LGSNPLGGPL PPVLGRLKML QRLDVKNASL VSTLPPELGS LSNLDFLDIS FNHLSGGLPA SFAGMQRMRE FGISSNNLTG EIPGKLFTSW PELISFQAQT
0401: NSLTGTIPHE VGKATKLLIL YLFSNNLSGV IPSQLGGLVN LAELDLSVNS LSGPIPSSFG NLKKLTRLAL FFNKLTGKIP PEIGNMTELQ ILDVNTNNLE
0501: GELPSSISLL RNLQYLSVFD NSMSGTVPPD LGAGLALTDV SFANNSFSGE LPQSLCDGFA LNNFTANHNS FSGKLPPCLK NCSELYRVRL EGNHFTGDIS
0601: EVFGVHPSMD YLDISGNKLT GRLSDDWGQC TKITRLKMDG NSISGTIPAA FGNMTSLQDL SLAANNLTGG IPPELGNLNF LFSLNLSHNS FSGPIPTSLG
0701: NNSKLQKVDL SGNMLNGTIP VGIDNLGSLT YLDLSKNILS GQIPGELGNL FQLQTLLDLS SNSLSGPIPS NLVKLANLQK LNLSHNELNG SIPASFSRMS
0801: SLEIVDFSYN QLTGEIPSGN AFQNSSAEAY IGNLGLCGNV QGIPSCDRSS TSGHHKKTVI AIVFSVVGAV LLAGIVACLI LACRRRPMEQ KVLEASTNDP
0901: YESVIWEKEG KFTFLDIVNA TDSFNELFCI GKGGFGSVYK AELPSGQVVA VKRFHVAETG DISEVSRKSF ENEIKALTEV RHRNIVKLHG FCTSGDYMYL
1001: VYEYLERGSL GKTLYGEEGK RKLDWGMRVK VVQGVAHALA YLHHDCSQPI VHRDITVNNI LLESEFEPRL SDFGTAKLLG SASTNWTSVA GSYGYMAPEL
1101: AYTMNVTEKC DVYSFGVVAL EVMMGKHPGD LLTSLPAISS STEEDLLLQD VLDQRLEPPT GDLAEEIVFV VRIALACTRA NPESRPSMRS VAQEISAHTQ
1201: AYLSEPFRQI TVSKLTDYQK
Best Arabidopsis Sequence Match ( AT1G35710.1 )
(BLAST)
0001: MGFAEKNLYD FRFLLFISII LSCSISASAT IAEANALLKW KSTFTNSSKL SSWVHDANTN TSFSCTSWYG VSCNSRGSIE ELNLTNTGIE GTFQDFPFIS
0101: LSNLAYVDLS MNLLSGTIPP QFGNLSKLIY FDLSTNHLTG EISPSLGNLK NLTVLYLHQN YLTSVIPSEL GNMESMTDLA LSQNKLTGSI PSSLGNLKNL
0201: MVLYLYENYL TGVIPPELGN MESMTDLALS QNKLTGSIPS TLGNLKNLMV LYLYENYLTG VIPPEIGNME SMTNLALSQN KLTGSIPSSL GNLKNLTLLS
0301: LFQNYLTGGI PPKLGNIESM IDLELSNNKL TGSIPSSLGN LKNLTILYLY ENYLTGVIPP ELGNMESMID LQLNNNKLTG SIPSSFGNLK NLTYLYLYLN
0401: YLTGVIPQEL GNMESMINLD LSQNKLTGSV PDSFGNFTKL ESLYLRVNHL SGAIPPGVAN SSHLTTLILD TNNFTGFFPE TVCKGRKLQN ISLDYNHLEG
0501: PIPKSLRDCK SLIRARFLGN KFTGDIFEAF GIYPDLNFID FSHNKFHGEI SSNWEKSPKL GALIMSNNNI TGAIPTEIWN MTQLVELDLS TNNLFGELPE
0601: AIGNLTNLSR LRLNGNQLSG RVPAGLSFLT NLESLDLSSN NFSSEIPQTF DSFLKLHDMN LSRNKFDGSI PRLSKLTQLT QLDLSHNQLD GEIPSQLSSL
0701: QSLDKLDLSH NNLSGLIPTT FEGMIALTNV DISNNKLEGP LPDTPTFRKA TADALEENIG LCSNIPKQRL KPCRELKKPK KNGNLVVWIL VPILGVLVIL
0801: SICANTFTYC IRKRKLQNGR NTDPETGENM SIFSVDGKFK YQDIIESTNE FDPTHLIGTG GYSKVYRANL QDTIIAVKRL HDTIDEEISK PVVKQEFLNE
0901: VKALTEIRHR NVVKLFGFCS HRRHTFLIYE YMEKGSLNKL LANDEEAKRL TWTKRINVVK GVAHALSYMH HDRITPIVHR DISSGNILLD NDYTAKISDF
1001: GTAKLLKTDS SNWSAVAGTY GYVAPEFAYT MKVTEKCDVY SFGVLILELI IGKHPGDLVS SLSSSPGEAL SLRSISDERV LEPRGQNREK LLKMVEMALL
1101: CLQANPESRP TMLSISTTFS
Arabidopsis Description
Probable leucine-rich repeat receptor-like protein kinase At1g35710 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP24]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.