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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 8
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
extracellular: 24083427
plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 24083427 doi
T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu
Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS1A01G149700.1 Wheat plasma membrane 77.74 77.36
HORVU1Hr1G039370.1 Barley plasma membrane 77.08 76.83
TraesCS1D01G146900.1 Wheat plasma membrane 76.5 76.19
KXG38367 Sorghum plasma membrane 75.35 74.92
TraesCS1B01G167700.1 Wheat plasma membrane, plastid 77.49 72.64
Zm00001d032745_P001 Maize plasma membrane 73.12 72.53
Zm00001d014063_P001 Maize plasma membrane 72.55 70.18
GSMUA_Achr5P20440_001 Banana plasma membrane, vacuole 46.66 62.96
VIT_07s0005g04060.t01 Wine grape cytosol 28.85 61.95
GSMUA_Achr9P18790_001 Banana plasma membrane 42.79 59.45
VIT_07s0005g04020.t01 Wine grape plasma membrane 53.67 53.4
VIT_07s0005g04050.t01 Wine grape plasma membrane 52.6 52.34
VIT_07s0005g04040.t01 Wine grape plasma membrane 52.43 52.17
Solyc09g072810.2.1 Tomato plasma membrane 51.69 51.44
KRH67434 Soybean cytosol 34.54 51.16
PGSC0003DMT400009696 Potato plasma membrane 51.36 51.11
KRG95718 Soybean plasma membrane 51.77 51.06
VIT_07s0005g04100.t01 Wine grape plasma membrane 48.47 50.52
KRH67435 Soybean plasma membrane 51.11 50.45
KRH67440 Soybean plasma membrane 49.96 49.27
KRG95717 Soybean plasma membrane 49.46 48.62
VIT_07s0005g04070.t01 Wine grape plasma membrane 34.05 46.72
Os10t0467900-01 Rice plastid 38.91 43.3
Os02t0553000-01 Rice plasma membrane 14.84 41.67
Os01t0515300-01 Rice extracellular, mitochondrion 16.08 36.31
Os02t0277700-01 Rice plasma membrane 17.81 34.9
Os10t0155700-00 Rice cytosol 24.65 32.36
Protein Annotations
Gene3D:1.10.510.10MapMan:18.4.1.12Gene3D:3.30.200.20Gene3D:3.80.10.10EntrezGene:4348855ProteinID:ABB47773.1
ProteinID:BAF26727.1ProteinID:BAT11232.1ProteinID:BAT11233.1GO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0004672GO:GO:0005488GO:GO:0005515GO:GO:0005524GO:GO:0005575GO:GO:0006464
GO:GO:0006468GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016020GO:GO:0016021
GO:GO:0016301GO:GO:0016740GO:GO:0019538InterPro:IPR000719InterPro:IPR001611InterPro:IPR032675
InterPro:Kinase-like_dom_sfInterPro:LRR_N_plant-typInterPro:LRR_dom_sfInterPro:Leu-rich_rptInterPro:Leu-rich_rpt_typical-subtypEnsemblPlantsGene:Os10g0468500
EnsemblPlants:Os10t0468500-01PFAM:PF00069PFAM:PF00560PFAM:PF08263PFAM:PF13516PFAM:PF13855
ScanProsite:PS00107ScanProsite:PS00109PFscan:PS50011PANTHER:PTHR27000PANTHER:PTHR27000:SF227InterPro:Prot_kinase_dom
InterPro:Protein_kinase_ATP_BSUniProt:Q337M0SMART:SM00369SUPFAM:SSF52047SUPFAM:SSF52058SUPFAM:SSF56112
SignalP:SignalP-noTMTMHMM:TMhelixInterPro:Tyr_kinase_ASUniParc:UPI00005E1F12RefSeq:XP_015614138.1SEG:seg
Description
Serine/threonine protein kinase-related domain containing protein. (Os10t0468500-01);Hypothetical conserved gene. (Os10t0468500-02)
Coordinates
chr10:+:17312261..17316877
Molecular Weight (calculated)
130611.0 Da
IEP (calculated)
6.243
GRAVY (calculated)
0.039
Length
1213 amino acids
Sequence
(BLAST)
0001: MPRRHDALRL LLLVVVVAAA DAATEADALL AWKAGLQDGA AALSGWSRAA PVCAWRGVAC DAAAGGARVT SLRLRGAGLG GGLDALDFAA LPALAELDLN
0101: GNNFTGAIPA SISRLRSLAS LDLGNNGFSD SIPPQLGDLS GLVDLRLYNN NLVGAIPHQL SRLPKVAHFD LGANYLTDED FAKFSPMPTV TFMSLYLNSF
0201: NGSFPEFILK SGNVTYLDLS QNTLFGKIPD TLPEKLPNLR YLNLSINAFS GPIPASLGKL TKLQDLRMAA NNLTGGVPEF LGSMPQLRIL ELGDNQLGGP
0301: IPPVLGQLQM LQRLDIKNSG LSSTLPSQLG NLKNLIFFEL SLNQLSGGLP PEFAGMRAMR YFGISTNNLT GEIPPVLFTS WPELISFQVQ NNSLTGKIPP
0401: ELGKASKLNI LYLFTNKFTG SIPAELGELE NLTELDLSVN SLTGPIPSSF GNLKQLTKLA LFFNNLTGVI PPEIGNMTAL QSLDVNTNSL HGELPATITA
0501: LRSLQYLAVF DNHMSGTIPA DLGKGLALQH VSFTNNSFSG ELPRHICDGF ALDHLTANYN NFTGALPPCL KNCTALVRVR LEENHFTGDI SEAFGVHPKL
0601: VYLDVSGNKL TGELSSAWGQ CINLTLLHLD GNRISGGIPA AFGSMTSLKD LNLAGNNLTG GIPPVLGNIR VFNLNLSHNS FSGPIPASLS NNSKLQKVDF
0701: SGNMLDGTIP VAISKLDALI LLDLSKNRLS GEIPSELGNL AQLQILLDLS SNSLSGAIPP NLEKLITLQR LNLSHNELSG SIPAGFSRMS SLESVDFSYN
0801: RLTGSIPSGN VFQNASASAY VGNSGLCGDV QGLTPCDISS TGSSSGHHKR VVIATVVSVV GVVLLLAVVT CIILLCRRRP REKKEVESNT NYSYESTIWE
0901: KEGKFTFFDI VNATDNFNET FCIGKGGFGS VYRAELSSGQ VVAVKRFHVA DTGDIPDVNK KSFENEIKAL TEVRHRNIVK LHGFCTSGDY MYLVYEYLER
1001: GSLGKTLYGE EGKKKMDWGM RVKVVQGLAH ALAYLHHDCN PAIVHRDITV NNILLESDFE PRLCDFGTAK LLGGASTNWT SVAGSYGYMA PEFAYTMRVT
1101: EKCDVYSFGV VALEVMMGKH PGDLLTSLPA ISSSEEDDLL LKDILDQRLD APTGQLAEEV VFIVRIALGC TRVNPESRPS MRSVAQEISA HTQAYLSEPF
1201: KLITISKLTD YQK
Best Arabidopsis Sequence Match ( AT1G35710.1 )
(BLAST)
0001: MGFAEKNLYD FRFLLFISII LSCSISASAT IAEANALLKW KSTFTNSSKL SSWVHDANTN TSFSCTSWYG VSCNSRGSIE ELNLTNTGIE GTFQDFPFIS
0101: LSNLAYVDLS MNLLSGTIPP QFGNLSKLIY FDLSTNHLTG EISPSLGNLK NLTVLYLHQN YLTSVIPSEL GNMESMTDLA LSQNKLTGSI PSSLGNLKNL
0201: MVLYLYENYL TGVIPPELGN MESMTDLALS QNKLTGSIPS TLGNLKNLMV LYLYENYLTG VIPPEIGNME SMTNLALSQN KLTGSIPSSL GNLKNLTLLS
0301: LFQNYLTGGI PPKLGNIESM IDLELSNNKL TGSIPSSLGN LKNLTILYLY ENYLTGVIPP ELGNMESMID LQLNNNKLTG SIPSSFGNLK NLTYLYLYLN
0401: YLTGVIPQEL GNMESMINLD LSQNKLTGSV PDSFGNFTKL ESLYLRVNHL SGAIPPGVAN SSHLTTLILD TNNFTGFFPE TVCKGRKLQN ISLDYNHLEG
0501: PIPKSLRDCK SLIRARFLGN KFTGDIFEAF GIYPDLNFID FSHNKFHGEI SSNWEKSPKL GALIMSNNNI TGAIPTEIWN MTQLVELDLS TNNLFGELPE
0601: AIGNLTNLSR LRLNGNQLSG RVPAGLSFLT NLESLDLSSN NFSSEIPQTF DSFLKLHDMN LSRNKFDGSI PRLSKLTQLT QLDLSHNQLD GEIPSQLSSL
0701: QSLDKLDLSH NNLSGLIPTT FEGMIALTNV DISNNKLEGP LPDTPTFRKA TADALEENIG LCSNIPKQRL KPCRELKKPK KNGNLVVWIL VPILGVLVIL
0801: SICANTFTYC IRKRKLQNGR NTDPETGENM SIFSVDGKFK YQDIIESTNE FDPTHLIGTG GYSKVYRANL QDTIIAVKRL HDTIDEEISK PVVKQEFLNE
0901: VKALTEIRHR NVVKLFGFCS HRRHTFLIYE YMEKGSLNKL LANDEEAKRL TWTKRINVVK GVAHALSYMH HDRITPIVHR DISSGNILLD NDYTAKISDF
1001: GTAKLLKTDS SNWSAVAGTY GYVAPEFAYT MKVTEKCDVY SFGVLILELI IGKHPGDLVS SLSSSPGEAL SLRSISDERV LEPRGQNREK LLKMVEMALL
1101: CLQANPESRP TMLSISTTFS
Arabidopsis Description
Probable leucine-rich repeat receptor-like protein kinase At1g35710 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP24]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.