Factsheet for VIT_07s0005g04060.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
plasma membrane 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_07s0005g04040.t01	Wine grape	plasma membrane	84.42	39.13
VIT_07s0005g04020.t01	Wine grape	plasma membrane	84.42	39.13
VIT_07s0005g04050.t01	Wine grape	plasma membrane	82.48	38.23
VIT_14s0108g00370.t01	Wine grape	plasma membrane, vacuole	23.36	36.77
VIT_12s0142g00800.t01	Wine grape	cytosol, nucleus, plasma membrane	41.77	35.81
VIT_12s0035g00020.t01	Wine grape	cytosol, plasma membrane, vacuole	38.41	34.89
Zm00001d032747_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane, plastid	36.99	34.6
VIT_12s0142g00760.t01	Wine grape	cytosol, nucleus, plasma membrane	47.79	34.57
VIT_07s0005g04100.t01	Wine grape	plasma membrane	70.8	34.36
KRH67434	Soybean	cytosol	49.56	34.19
GSMUA_Achr5P20440_001	Banana	plasma membrane, vacuole	50.27	31.59
GSMUA_Achr9P18790_001	Banana	plasma membrane	48.32	31.27
Solyc09g072810.2.1	Tomato	plasma membrane	66.9	31.01
PGSC0003DMT400009696	Potato	plasma membrane	66.19	30.68
Os10t0468500-01	Rice	plasma membrane	61.95	28.85
Zm00001d032745_P001	Maize	plasma membrane	61.42	28.37
KXG38367	Sorghum	plasma membrane	61.24	28.36
HORVU1Hr1G039370.1	Barley	plasma membrane	60.88	28.27
TraesCS1D01G146900.1	Wheat	plasma membrane	60.18	27.91
KRH67435	Soybean	plasma membrane	60.71	27.91
KRG95718	Soybean	plasma membrane	60.71	27.89
TraesCS1A01G149700.1	Wheat	plasma membrane	59.65	27.65
KRH67440	Soybean	plasma membrane	60.0	27.56
Zm00001d014063_P001	Maize	plasma membrane	60.35	27.19
KRG95717	Soybean	plasma membrane	59.29	27.15
VIT_14s0066g02670.t01	Wine grape	plasma membrane, vacuole	33.98	26.78
VIT_10s0042g00600.t01	Wine grape	plasma membrane	36.46	26.31
TraesCS1B01G167700.1	Wheat	plasma membrane, plastid	60.18	26.28
VIT_17s0000g02390.t01	Wine grape	plasma membrane	46.9	25.68
VIT_14s0108g00300.t01	Wine grape	plasma membrane	35.22	25.42
VIT_14s0066g02660.t01	Wine grape	plasma membrane	35.04	25.29
TraesCS1B01G167500.1	Wheat	plasma membrane, plastid	43.54	24.97
VIT_14s0066g02680.t01	Wine grape	cytosol	33.45	24.93
VIT_10s0042g00770.t01	Wine grape	plasma membrane	37.88	24.49
VIT_10s0042g00700.t01	Wine grape	plasma membrane	36.28	24.32
VIT_14s0108g00340.t01	Wine grape	plasma membrane	36.99	23.8
VIT_04s0079g00240.t01	Wine grape	plasma membrane	30.8	23.64
TraesCS1D01G146700.1	Wheat	plasma membrane	44.42	23.2
VIT_07s0005g04070.t01	Wine grape	plasma membrane	35.75	22.85
Os10t0467900-01	Rice	plastid	44.07	22.84
TraesCS1B01G167400.1	Wheat	plasma membrane	44.42	22.8
TraesCS1A01G149400.1	Wheat	plasma membrane	41.95	22.66
TraesCS1A01G149500.1	Wheat	plasma membrane	43.54	22.34
TraesCS1D01G146800.1	Wheat	plasma membrane	43.36	22.31
HORVU1Hr1G039500.1	Barley	cytosol, peroxisome	44.07	22.25
HORVU1Hr1G039400.1	Barley	plasma membrane, plastid	43.89	22.04
VIT_12s0034g02570.t01	Wine grape	plasma membrane	46.37	21.89
VIT_11s0037g00660.t01	Wine grape	plasma membrane	45.84	21.35
VIT_11s0037g00690.t01	Wine grape	plasma membrane	47.43	21.27
VIT_13s0084g00560.t01	Wine grape	plasma membrane	42.83	17.57
VIT_12s0035g00080.t01	Wine grape	plasma membrane	45.84	14.91
VIT_17s0000g02360.t01	Wine grape	plasma membrane	42.83	14.51
VIT_14s0108g00280.t01	Wine grape	plasma membrane	34.34	13.61

Protein Annotations

Gene3D:1.10.510.10	Gene3D:3.30.200.20	Gene3D:3.80.10.10	MapMan:50.2.7	ProteinID:CCB60159	ProteinID:CCB60159.1
UniProt:F6HZP4	EMBL:FN596502	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719
InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PFAM:PF00069
PFAM:PF00560	PFAM:PF13516	ScanProsite:PS00109	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27000
PANTHER:PTHR27000:SF438	InterPro:Prot_kinase_dom	SUPFAM:SSF52047	SUPFAM:SSF56112	InterPro:Tyr_kinase_AS	UniParc:UPI00021096FE
ArrayExpress:VIT_07s0005g04060	EnsemblPlantsGene:VIT_07s0005g04060	EnsemblPlants:VIT_07s0005g04060.t01	SEG:seg	:	:

Description

No Description!

Coordinates

chr7:+:7161837..7164031

Molecular Weight (calculated)

62164.3 Da

IEP (calculated)

6.608

GRAVY (calculated)

-0.157

Length

565 amino acids

Sequence
(BLAST)

001: MNVSFANNRF SGELPPGLSN GFAFQHLTVN EGNNFTGPLP ECLMNCTRLF RVRLEGNQFT GDISKAFGVH PSLNFISLSG NRFSGELSPE WGECQSLTSL
101: QVDGNKISGE IPAELGKFRL FNLSLSRNHL TGDIPQFTGN LTNLQYLNLA GNEFHKDLSG EIPSELGNLF TLQYLLDLSG NSLSGTIPSN LGKLASLENL
201: NLSHNHLTGR IPSSLSNMKS LNSFDFSYNE LTCPIPTRDV SKQATYTGNS GLCGVAEELS PCSSSSPSSK PLIWERLRKF RFGDIVKATE DFSENYCIGK
301: GGFQTVYKVA LPMGQINEIL TLTEVKHRNI IKLHGFHSRN GFMYLVCNYL ERGSLGKELY GEEGKVELGW ATRFSILQGV AHALAYLHHD CSPPIVHHDV
401: TLNNILLESD FVPRLSDFDT ARLWDLNSSN WSTVAGSYGY IAPELALTMR VTNKCDVYGF GAVALEVMMG RHPGELLLLL SSPEISDGPG LLLKDMLDQR
501: LPAPQGQLAE KVVRVVTIAL ACTRANPEPR PTMRFVAQEL SAQIQARLSE PFHTVTIGKL TSLQK

Best Arabidopsis Sequence Match ( AT1G35710.1 )
(BLAST)

0001: MGFAEKNLYD FRFLLFISII LSCSISASAT IAEANALLKW KSTFTNSSKL SSWVHDANTN TSFSCTSWYG VSCNSRGSIE ELNLTNTGIE GTFQDFPFIS
0101: LSNLAYVDLS MNLLSGTIPP QFGNLSKLIY FDLSTNHLTG EISPSLGNLK NLTVLYLHQN YLTSVIPSEL GNMESMTDLA LSQNKLTGSI PSSLGNLKNL
0201: MVLYLYENYL TGVIPPELGN MESMTDLALS QNKLTGSIPS TLGNLKNLMV LYLYENYLTG VIPPEIGNME SMTNLALSQN KLTGSIPSSL GNLKNLTLLS
0301: LFQNYLTGGI PPKLGNIESM IDLELSNNKL TGSIPSSLGN LKNLTILYLY ENYLTGVIPP ELGNMESMID LQLNNNKLTG SIPSSFGNLK NLTYLYLYLN
0401: YLTGVIPQEL GNMESMINLD LSQNKLTGSV PDSFGNFTKL ESLYLRVNHL SGAIPPGVAN SSHLTTLILD TNNFTGFFPE TVCKGRKLQN ISLDYNHLEG
0501: PIPKSLRDCK SLIRARFLGN KFTGDIFEAF GIYPDLNFID FSHNKFHGEI SSNWEKSPKL GALIMSNNNI TGAIPTEIWN MTQLVELDLS TNNLFGELPE
0601: AIGNLTNLSR LRLNGNQLSG RVPAGLSFLT NLESLDLSSN NFSSEIPQTF DSFLKLHDMN LSRNKFDGSI PRLSKLTQLT QLDLSHNQLD GEIPSQLSSL
0701: QSLDKLDLSH NNLSGLIPTT FEGMIALTNV DISNNKLEGP LPDTPTFRKA TADALEENIG LCSNIPKQRL KPCRELKKPK KNGNLVVWIL VPILGVLVIL
0801: SICANTFTYC IRKRKLQNGR NTDPETGENM SIFSVDGKFK YQDIIESTNE FDPTHLIGTG GYSKVYRANL QDTIIAVKRL HDTIDEEISK PVVKQEFLNE
0901: VKALTEIRHR NVVKLFGFCS HRRHTFLIYE YMEKGSLNKL LANDEEAKRL TWTKRINVVK GVAHALSYMH HDRITPIVHR DISSGNILLD NDYTAKISDF
1001: GTAKLLKTDS SNWSAVAGTY GYVAPEFAYT MKVTEKCDVY SFGVLILELI IGKHPGDLVS SLSSSPGEAL SLRSISDERV LEPRGQNREK LLKMVEMALL
1101: CLQANPESRP TMLSISTTFS

Arabidopsis Description

Probable leucine-rich repeat receptor-like protein kinase At1g35710 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP24]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.