Factsheet for VIT_12s0035g00020.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:

nucleus 1
vacuole 1
plasma membrane 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0142g00800.t01	Wine grape	cytosol, nucleus, plasma membrane	71.86	67.83
VIT_12s0142g00760.t01	Wine grape	cytosol, nucleus, plasma membrane	85.05	67.73
KRH07068	Soybean	plasma membrane	31.67	50.64
VIT_14s0108g00370.t01	Wine grape	plasma membrane, vacuole	28.3	49.03
VIT_12s0034g02570.t01	Wine grape	plasma membrane	91.32	47.45
KRG88511	Soybean	plastid	44.53	41.53
KRH01058	Soybean	cytosol	36.01	41.1
KRH07062	Soybean	cytosol	6.75	39.62
VIT_07s0005g04060.t01	Wine grape	cytosol	34.89	38.41
PGSC0003DMT400016283	Potato	mitochondrion, plastid	48.07	36.11
KRH00174	Soybean	plasma membrane	49.84	35.15
KRH07053	Soybean	cytosol, plasma membrane, vacuole	42.93	35.04
KRG94387	Soybean	plasma membrane	50.96	32.99
VIT_11s0037g00660.t01	Wine grape	plasma membrane	63.34	32.48
KRH07050	Soybean	plasma membrane	49.84	32.46
Solyc04g071680.1.1	Tomato	plasma membrane	47.91	32.43
VIT_11s0037g00690.t01	Wine grape	plasma membrane	65.59	32.38
VIT_14s0066g02670.t01	Wine grape	plasma membrane, vacuole	37.3	32.36
KRH14772	Soybean	plasma membrane	50.64	32.24
KRH07051	Soybean	plasma membrane	48.87	32.17
VIT_14s0108g00300.t01	Wine grape	plasma membrane	40.03	31.8
VIT_14s0066g02680.t01	Wine grape	cytosol	38.75	31.79
VIT_13s0084g00560.t01	Wine grape	plasma membrane	69.13	31.23
VIT_04s0079g00240.t01	Wine grape	plasma membrane	36.66	30.98
VIT_12s0035g00080.t01	Wine grape	plasma membrane	86.5	30.97
KRH07066	Soybean	plasma membrane	42.93	30.94
KRH73363	Soybean	plasma membrane	51.13	30.58
VIT_14s0108g00340.t01	Wine grape	plasma membrane	42.93	30.41
KRH40181	Soybean	plasma membrane	49.2	30.33
VIT_10s0042g00600.t01	Wine grape	plasma membrane	37.62	29.89
KRH01040	Soybean	plasma membrane	50.96	29.63
KRH01038	Soybean	plasma membrane	51.45	29.57
KRH01051	Soybean	plasma membrane	50.96	29.57
VIT_14s0066g02660.t01	Wine grape	plasma membrane	36.98	29.37
KRH01055	Soybean	plasma membrane	50.96	29.3
VIT_17s0000g02390.t01	Wine grape	plasma membrane	48.55	29.26
KRH14770	Soybean	plasma membrane	48.23	29.18
VIT_10s0042g00700.t01	Wine grape	plasma membrane	39.55	29.18
KRH00188	Soybean	plasma membrane	50.8	28.68
KRH13407	Soybean	plasma membrane	50.96	28.53
KRH00186	Soybean	plasma membrane	50.16	28.47
KRH14774	Soybean	plasma membrane	50.16	28.39
KRH07059	Soybean	plastid	50.16	27.83
VIT_10s0042g00770.t01	Wine grape	plasma membrane	38.75	27.57
KRH07061	Soybean	plasma membrane	50.32	26.64
KRH38225	Soybean	plasma membrane	32.96	26.38
KRH07070	Soybean	plasma membrane	49.68	25.69
KRH07060	Soybean	plasma membrane	50.48	24.63
VIT_07s0005g04100.t01	Wine grape	plasma membrane	45.34	24.23
VIT_07s0005g04040.t01	Wine grape	plasma membrane	44.21	22.56
VIT_07s0005g04050.t01	Wine grape	plasma membrane	43.89	22.4
VIT_07s0005g04020.t01	Wine grape	plasma membrane	43.73	22.31
KRH07063	Soybean	plasma membrane	35.37	21.67
KRH07065	Soybean	plasma membrane	50.8	20.22
VIT_17s0000g02360.t01	Wine grape	plasma membrane	48.07	17.93
VIT_14s0108g00280.t01	Wine grape	plasma membrane	38.91	16.98
VIT_07s0005g04070.t01	Wine grape	plasma membrane	17.04	11.99
KRH07069	Soybean	endoplasmic reticulum	15.27	11.77

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.12	Gene3D:3.30.200.20	Gene3D:3.80.10.10	ProteinID:CCB55095	ProteinID:CCB55095.1
UniProt:F6HK92	EMBL:FN595990	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672
GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301
GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:Kinase-like_dom_sf
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_4	PFAM:PF00069	PFAM:PF00560	PFAM:PF12799
PFAM:PF13855	PRINTS:PR00019	ScanProsite:PS00107	ScanProsite:PS00109	PFscan:PS50011	PANTHER:PTHR27000
PANTHER:PTHR27000:SF241	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SUPFAM:SSF52058	SUPFAM:SSF56112	TMHMM:TMhelix
InterPro:Tyr_kinase_AS	UniParc:UPI00021090E5	ArrayExpress:VIT_12s0035g00020	EnsemblPlantsGene:VIT_12s0035g00020	EnsemblPlants:VIT_12s0035g00020.t01	SEG:seg

Description

No Description!

Coordinates

chr12:-:19143600..19146418

Molecular Weight (calculated)

68818.1 Da

IEP (calculated)

7.480

GRAVY (calculated)

-0.085

Length

622 amino acids

Sequence
(BLAST)

001: MLLKKFQPKG TISLKWGECH MLTNLNISNN KISGAIPPQL GKAIQLQQLD LSSNHLIGKI PKELGMLPLL FKLLLGNNKL SGSIPLELGN LSNLEILDLA
101: SNNLSGPIPK QLGNFWKLWS LNLSENRFVD SIPDEIGKMH HLRSLDLSQN MLTGEMPPLL GELQNLETLN LSHNGLSGTI PHTFDDLISL TVADISYNQL
201: EGPLPNIKAF APFEAFKNNK GLCGNNVTHL KPCSASRKKA NKFSILIIIL LIVSSLLFLF AFVIGIFFLF QKLRKRKTKS PEADVEDLFA IWGHDGELLY
301: EHIIQGTDNF SSKQCIGTGG YGTVYKAELP TGRVVAVKKL HSSQDGDMAD LKAFKSEIHA LTQIRHRSIV KLYGFSLFAE NSFLVYEFME KGSLRNILRN
401: DEEAEKLDWI VRLNVVKGVA KALSYMHHDC SPPIIHRDIS SNNVLLDSEY EAHVSDFGTA RLLKSDSSNW TSFAGTFGYT APELAYSMKV DNKTDVYSFG
501: VVTLEVIMGR HPGELISSLL SSASSSSTSP STAGHFLLND VIDQRPSPPV NQVAKEVEVA VKLAFACLRV NPQSRPTMQQ VYYREETHSV PVEMTEGKCD
601: VLATFGTYFC LKGPSSSSQV GY

Best Arabidopsis Sequence Match ( AT1G17230.1 )
(BLAST)

0001: MRGRICFLAI VILCSFSFIL VRSLNEEGRV LLEFKAFLND SNGYLASWNQ LDSNPCNWTG IACTHLRTVT SVDLNGMNLS GTLSPLICKL HGLRKLNVST
0101: NFISGPIPQD LSLCRSLEVL DLCTNRFHGV IPIQLTMIIT LKKLYLCENY LFGSIPRQIG NLSSLQELVI YSNNLTGVIP PSMAKLRQLR IIRAGRNGFS
0201: GVIPSEISGC ESLKVLGLAE NLLEGSLPKQ LEKLQNLTDL ILWQNRLSGE IPPSVGNISR LEVLALHENY FTGSIPREIG KLTKMKRLYL YTNQLTGEIP
0301: REIGNLIDAA EIDFSENQLT GFIPKEFGHI LNLKLLHLFE NILLGPIPRE LGELTLLEKL DLSINRLNGT IPQELQFLPY LVDLQLFDNQ LEGKIPPLIG
0401: FYSNFSVLDM SANSLSGPIP AHFCRFQTLI LLSLGSNKLS GNIPRDLKTC KSLTKLMLGD NQLTGSLPIE LFNLQNLTAL ELHQNWLSGN ISADLGKLKN
0501: LERLRLANNN FTGEIPPEIG NLTKIVGFNI SSNQLTGHIP KELGSCVTIQ RLDLSGNKFS GYIAQELGQL VYLEILRLSD NRLTGEIPHS FGDLTRLMEL
0601: QLGGNLLSEN IPVELGKLTS LQISLNISHN NLSGTIPDSL GNLQMLEILY LNDNKLSGEI PASIGNLMSL LICNISNNNL VGTVPDTAVF QRMDSSNFAG
0701: NHGLCNSQRS HCQPLVPHSD SKLNWLINGS QRQKILTITC IVIGSVFLIT FLGLCWTIKR REPAFVALED QTKPDVMDSY YFPKKGFTYQ GLVDATRNFS
0801: EDVVLGRGAC GTVYKAEMSG GEVIAVKKLN SRGEGASSDN SFRAEISTLG KIRHRNIVKL YGFCYHQNSN LLLYEYMSKG SLGEQLQRGE KNCLLDWNAR
0901: YRIALGAAEG LCYLHHDCRP QIVHRDIKSN NILLDERFQA HVGDFGLAKL IDLSYSKSMS AVAGSYGYIA PEYAYTMKVT EKCDIYSFGV VLLELITGKP
1001: PVQPLEQGGD LVNWVRRSIR NMIPTIEMFD ARLDTNDKRT VHEMSLVLKI ALFCTSNSPA SRPTMREVVA MITEARGSSS LSSSSITSET PLEEANSSKE
1101: I

Arabidopsis Description

Leucine-rich receptor-like protein kinase family protein [Source:UniProtKB/TrEMBL;Acc:A0A1P8AVG7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.