Factsheet for VIT_12s0035g00080.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1
plasma membrane 7
extracellular 3
endoplasmic reticulum 3
vacuole 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	cytosol
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0142g00800.t01	Wine grape	cytosol, nucleus, plasma membrane	33.62	88.62
VIT_12s0035g00020.t01	Wine grape	cytosol, plasma membrane, vacuole	30.97	86.5
VIT_12s0142g00760.t01	Wine grape	cytosol, nucleus, plasma membrane	37.48	83.35
VIT_12s0034g02570.t01	Wine grape	plasma membrane	56.48	81.95
VIT_11s0037g00690.t01	Wine grape	plasma membrane	50.43	69.52
VIT_11s0037g00660.t01	Wine grape	plasma membrane	45.31	64.88
VIT_13s0084g00560.t01	Wine grape	plasma membrane	48.7	61.44
KRG88511	Soybean	plastid	20.15	52.47
KRH00174	Soybean	plasma membrane	26.19	51.59
VIT_17s0000g02390.t01	Wine grape	plasma membrane	30.63	51.55
KRH01051	Soybean	plasma membrane	31.78	51.49
KRH01040	Soybean	plasma membrane	31.66	51.4
KRH01038	Soybean	plasma membrane	31.89	51.2
KRH07053	Soybean	cytosol, plasma membrane, vacuole	22.39	51.05
PGSC0003DMT400016283	Potato	mitochondrion, plastid	23.95	50.24
KRH14772	Soybean	plasma membrane	28.09	49.95
KRH01055	Soybean	plasma membrane	31.03	49.82
KRG94387	Soybean	plasma membrane	27.4	49.53
KRH40181	Soybean	plasma membrane	28.73	49.45
KRH07068	Soybean	plasma membrane	11.05	49.36
KRH07051	Soybean	plasma membrane	26.77	49.21
KRH07066	Soybean	plasma membrane	24.41	49.13
KRH07050	Soybean	plasma membrane	26.89	48.9
KRH14770	Soybean	plasma membrane	28.9	48.83
KRH00186	Soybean	plasma membrane	30.8	48.81
KRH13407	Soybean	plasma membrane	31.15	48.69
KRH73363	Soybean	plasma membrane	29.02	48.46
Solyc04g071680.1.1	Tomato	plasma membrane	25.33	47.88
KRH00188	Soybean	plasma membrane	30.28	47.73
VIT_14s0108g00370.t01	Wine grape	plasma membrane, vacuole	9.84	47.63
KRH38225	Soybean	plasma membrane	21.07	47.1
KRH07063	Soybean	plasma membrane	27.46	47.0
KRH01058	Soybean	cytosol	14.74	46.97
KRH07061	Soybean	plasma membrane	31.49	46.55
VIT_07s0005g04060.t01	Wine grape	cytosol	14.91	45.84
KRH14774	Soybean	plasma membrane	28.61	45.22
VIT_14s0108g00300.t01	Wine grape	plasma membrane	19.63	43.55
KRH07059	Soybean	plastid	28.09	43.53
KRH07070	Soybean	plasma membrane	29.99	43.31
VIT_14s0066g02670.t01	Wine grape	plasma membrane, vacuole	17.56	42.54
VIT_04s0079g00240.t01	Wine grape	plasma membrane	18.02	42.53
VIT_14s0066g02680.t01	Wine grape	cytosol	18.48	42.35
KRH07060	Soybean	plasma membrane	30.74	41.88
VIT_10s0042g00600.t01	Wine grape	plasma membrane	18.77	41.63
VIT_14s0066g02660.t01	Wine grape	plasma membrane	18.65	41.38
VIT_14s0108g00340.t01	Wine grape	plasma membrane	20.78	41.12
VIT_10s0042g00700.t01	Wine grape	plasma membrane	19.57	40.33
KRH07069	Soybean	endoplasmic reticulum	18.65	40.15
VIT_07s0005g04020.t01	Wine grape	plasma membrane	27.86	39.7
VIT_07s0005g04100.t01	Wine grape	plasma membrane	26.6	39.69
VIT_07s0005g04040.t01	Wine grape	plasma membrane	27.58	39.29
VIT_07s0005g04050.t01	Wine grape	plasma membrane	27.52	39.21
VIT_10s0042g00770.t01	Wine grape	plasma membrane	19.46	38.67
VIT_07s0005g04070.t01	Wine grape	plasma membrane	17.96	35.29
KRH07065	Soybean	plasma membrane	31.32	34.8
KRH07062	Soybean	cytosol	2.07	33.96
VIT_17s0000g02360.t01	Wine grape	plasma membrane	25.91	26.98
VIT_14s0108g00280.t01	Wine grape	plasma membrane	19.23	23.44

Protein Annotations

Gene3D:1.10.510.10	MapMan:18.4.1.12	Gene3D:3.30.200.20	Gene3D:3.40.50.10890	Gene3D:3.60.15.10	Gene3D:3.80.10.10
InterPro:Beta_Casp	ProteinID:CCB55092	ProteinID:CCB55092.1	InterPro:CPSF73-100_C	UniProt:F6HK89	EMBL:FN595990
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515
GO:GO:0005524	GO:GO:0005575	GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538
InterPro:IPR000719	InterPro:IPR001611	InterPro:IPR032675	InterPro:IPR036866	InterPro:Kinase-like_dom_sf	InterPro:LRR_N_plant-typ
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF07521	PFAM:PF08263
PFAM:PF10996	PFAM:PF11718	PFAM:PF13855	ScanProsite:PS00107	ScanProsite:PS00109	PFscan:PS50011
PFscan:PS51450	PANTHER:PTHR27000	PANTHER:PTHR27000:SF241	InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	InterPro:RMMBL
InterPro:RibonucZ/Hydroxyglut_hydro	SMART:SM00365	SMART:SM00369	SMART:SM01027	SMART:SM01098	SUPFAM:SSF52047
SUPFAM:SSF52058	SUPFAM:SSF56112	SUPFAM:SSF56281	TMHMM:TMhelix	InterPro:Tyr_kinase_AS	UniParc:UPI00021090E2
ArrayExpress:VIT_12s0035g00080	EnsemblPlantsGene:VIT_12s0035g00080	EnsemblPlants:VIT_12s0035g00080.t01	SEG:seg	:	:

Description

No Description!

Coordinates

chr12:-:19209788..19226262

Molecular Weight (calculated)

191496.0 Da

IEP (calculated)

6.361

GRAVY (calculated)

-0.024

Length

1737 amino acids

Sequence
(BLAST)

0001: MAFEYSSSYS LLSRLFITPY YFIFLLVLLY SISSFHVTSI SASTPTTSLS KVEKDQERLA LLTWKASLDN QTQSFLSSWS GRNSCYHWFG LTCHKSGSVS
0101: NLELDNCGLR GTLHNLNFSS LPNLLTLNLY NNSLYGTIPI NIGNLSKRIT NLNFAFNHFT GVISPQLGFL TSLSVLALSS NNFRGPIPPS IGNLRNLTTL
0201: YLHTNKLSGS IPQEIGLLTS LNDLELATNS LTGSIPPSIG NLRNLTTLYL FENELSGFIP QEIGLLRSLN DLELSTNNLT GPIPPSIGNL RNLTTLHLFK
0301: NKLSGSIPQE IGLLKSLNDL QLSTNNLTGP IPPSIGNLRN LTTLYLHTNK LSDSIPQEIG LLTSLNDLEL ATNSLTGPIP PSIGNLRNLT TLYLFENELS
0401: GFIPQEIGLL RSLNDLQLSF NNLIGPIPPS IGNLRNLTTL YLHTNKLSGS IPQEIGLLTS LIDLELETNS LTGSIPPSIG NLRNLTTLYL FENKLSGSIP
0501: QEIGLLTSLY DLDLAANSLS GPIPPSIGNL SSLTFLFLDH NKLSGAIPLE MNNITHLKSL QLVENNFIGQ LPQEICLGSV LENFTASGNH FTGPIPKGLK
0601: NCTSLFRVRL ERNQLTGDIA ESFGVYPTLN YIDLSSNNFY GELSEKWGQC HMLTNLNISN NNISGAIPPQ LGKATQLRQL DLSANHLSGK ILKELGMLPL
0701: LFKLLLGNNS LSGSIPLELG NLSNLEILDL ASNNISGSIP KQLGNFWKLR SFNLSENRFV DSIPDEIGKL HHLESLDLSQ NMLIGEIPPL LGELQYLETL
0801: NLSHNGLSGT IPHTFDDLIS LTVVDISYNQ LEGPLPNIKA FAPFEAFKNN KGLCGNNVTH LKPCSASRKK ANKFSVLIVI LLLVSSLLFL LAFVIGIFFL
0901: FQKLRKRKNK SPEADVEDLF AIWGHDGELL YEHIIQGTDN FSSKQCIGTG GYGTVYKAEL PTGRVVAVKK LHSSEDGDMA DLKAFKSEIH ALTQIRHRNI
1001: VKLYGFSSFA ENSFLVYEFM EKGSLQNILC NDEEAERLDW IVRLNVIKGV AKALSYMHHD CSPPVIHRDI SSNNVLLDSE YEAHVSDFGT ARLLKSDSSN
1101: WTSFAGTFGY TAPELAYTMK VDNKTDVYSF GVVTLEVIMG RHPGELISSL LSSASSSSAS PSTVGHFLLN DVIDQRPSPP VNQVAEEVVV AVKLAFAYRN
1201: PSFLSATNKV FGSGYNAHCL SRLKESLDYF ISSNLVIDFH QTLEVNGIRF WCYTAGHVLG AAMFMVDIAG VRVLYTGDYS SEEDRHLRAA EIPQFCPDIC
1301: IIESTYGVQL HQPRHVREKR FTDVIHSTIS QGGRVLIPAY ALGRAQELLL ILDEYWSNHP ELHNIPYFML PPLQKGPSVV MASPGGLQSG LSRQLFDMWC
1401: SDKKNACVIP GYVVGGTLAK TIINEPKEVT LMNGLTAPLN MQVHYISFSA HADFAQTSTF LKELMPPNII LVHGEANEMG RLKQKLITQF ADCNTKIISP
1501: KNCQSVEMYF NSEKMAKTIE RLAEKTPEVG EIVSGLLVKK GFTYQIMAPD DLHVFSQLST ANVTQRITIP YTGAFGVIKH RLKQIYESVE SLPDEESEVP
1601: AFQVHERVTV KHESEKHISL RWTSDPISDM VSDSIVALVL NISLEIPKVV VESEAMKTEE ENGKKAEKVI HALLVSLFGD VKLEGNGNLV ISVDGNVVHL
1701: DKQSGNVESE NEGLKERVRV AFQRIQNAVK PIPPSVS

Best Arabidopsis Sequence Match ( AT1G35710.1 )
(BLAST)

0001: MGFAEKNLYD FRFLLFISII LSCSISASAT IAEANALLKW KSTFTNSSKL SSWVHDANTN TSFSCTSWYG VSCNSRGSIE ELNLTNTGIE GTFQDFPFIS
0101: LSNLAYVDLS MNLLSGTIPP QFGNLSKLIY FDLSTNHLTG EISPSLGNLK NLTVLYLHQN YLTSVIPSEL GNMESMTDLA LSQNKLTGSI PSSLGNLKNL
0201: MVLYLYENYL TGVIPPELGN MESMTDLALS QNKLTGSIPS TLGNLKNLMV LYLYENYLTG VIPPEIGNME SMTNLALSQN KLTGSIPSSL GNLKNLTLLS
0301: LFQNYLTGGI PPKLGNIESM IDLELSNNKL TGSIPSSLGN LKNLTILYLY ENYLTGVIPP ELGNMESMID LQLNNNKLTG SIPSSFGNLK NLTYLYLYLN
0401: YLTGVIPQEL GNMESMINLD LSQNKLTGSV PDSFGNFTKL ESLYLRVNHL SGAIPPGVAN SSHLTTLILD TNNFTGFFPE TVCKGRKLQN ISLDYNHLEG
0501: PIPKSLRDCK SLIRARFLGN KFTGDIFEAF GIYPDLNFID FSHNKFHGEI SSNWEKSPKL GALIMSNNNI TGAIPTEIWN MTQLVELDLS TNNLFGELPE
0601: AIGNLTNLSR LRLNGNQLSG RVPAGLSFLT NLESLDLSSN NFSSEIPQTF DSFLKLHDMN LSRNKFDGSI PRLSKLTQLT QLDLSHNQLD GEIPSQLSSL
0701: QSLDKLDLSH NNLSGLIPTT FEGMIALTNV DISNNKLEGP LPDTPTFRKA TADALEENIG LCSNIPKQRL KPCRELKKPK KNGNLVVWIL VPILGVLVIL
0801: SICANTFTYC IRKRKLQNGR NTDPETGENM SIFSVDGKFK YQDIIESTNE FDPTHLIGTG GYSKVYRANL QDTIIAVKRL HDTIDEEISK PVVKQEFLNE
0901: VKALTEIRHR NVVKLFGFCS HRRHTFLIYE YMEKGSLNKL LANDEEAKRL TWTKRINVVK GVAHALSYMH HDRITPIVHR DISSGNILLD NDYTAKISDF
1001: GTAKLLKTDS SNWSAVAGTY GYVAPEFAYT MKVTEKCDVY SFGVLILELI IGKHPGDLVS SLSSSPGEAL SLRSISDERV LEPRGQNREK LLKMVEMALL
1101: CLQANPESRP TMLSISTTFS

Arabidopsis Description

Probable leucine-rich repeat receptor-like protein kinase At1g35710 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP24]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.