Factsheet for VIT_12s0034g02570.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 2
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 8
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0035g00020.t01	Wine grape	cytosol, plasma membrane, vacuole	47.45	91.32
VIT_12s0142g00800.t01	Wine grape	cytosol, nucleus, plasma membrane	46.2	83.92
VIT_12s0142g00760.t01	Wine grape	cytosol, nucleus, plasma membrane	54.3	83.23
VIT_11s0037g00690.t01	Wine grape	plasma membrane	68.0	64.6
VIT_11s0037g00660.t01	Wine grape	plasma membrane	62.66	61.83
VIT_13s0084g00560.t01	Wine grape	plasma membrane	67.0	58.24
VIT_12s0035g00080.t01	Wine grape	plasma membrane	81.95	56.48
KRG88511	Soybean	plastid	30.33	54.42
KRH07053	Soybean	cytosol, plasma membrane, vacuole	32.92	51.71
KRH01040	Soybean	plasma membrane	46.2	51.68
KRH07068	Soybean	plasma membrane	16.71	51.41
KRH01038	Soybean	plasma membrane	46.45	51.39
KRH00174	Soybean	plasma membrane	37.84	51.36
KRH01051	Soybean	plasma membrane	45.78	51.12
KRH01055	Soybean	plasma membrane	45.7	50.55
PGSC0003DMT400016283	Potato	mitochondrion, plastid	34.92	50.48
KRH14772	Soybean	plasma membrane	41.1	50.36
VIT_17s0000g02390.t01	Wine grape	plasma membrane	43.19	50.1
VIT_14s0108g00370.t01	Wine grape	plasma membrane, vacuole	14.95	49.86
KRH40181	Soybean	plasma membrane	42.02	49.85
KRH07066	Soybean	plasma membrane	35.76	49.59
KRG94387	Soybean	plasma membrane	39.77	49.53
KRH73363	Soybean	plasma membrane	42.52	48.94
KRH00186	Soybean	plasma membrane	44.61	48.72
KRH07050	Soybean	plasma membrane	38.85	48.69
KRH14770	Soybean	plasma membrane	41.6	48.44
KRH07051	Soybean	plasma membrane	38.18	48.36
KRH00188	Soybean	plasma membrane	44.44	48.28
KRH13407	Soybean	plasma membrane	44.78	48.24
Solyc04g071680.1.1	Tomato	plasma membrane	36.76	47.88
KRH07061	Soybean	plasma membrane	45.95	46.81
VIT_07s0005g04060.t01	Wine grape	cytosol	21.89	46.37
KRH01058	Soybean	cytosol	20.97	46.05
KRH38225	Soybean	plasma membrane	29.57	45.56
KRH14774	Soybean	plasma membrane	41.69	45.4
KRH07063	Soybean	plasma membrane	38.35	45.22
KRH07059	Soybean	plastid	41.44	44.25
VIT_14s0108g00300.t01	Wine grape	plasma membrane	28.57	43.68
VIT_14s0066g02670.t01	Wine grape	plasma membrane, vacuole	26.15	43.65
KRH07070	Soybean	plasma membrane	43.78	43.56
KRH07060	Soybean	plasma membrane	45.45	42.67
VIT_14s0066g02680.t01	Wine grape	cytosol	26.9	42.48
VIT_10s0042g00600.t01	Wine grape	plasma membrane	27.74	42.4
VIT_14s0066g02660.t01	Wine grape	plasma membrane	27.74	42.4
VIT_04s0079g00240.t01	Wine grape	plasma membrane	25.81	41.98
KRH07062	Soybean	cytosol	3.68	41.51
VIT_14s0108g00340.t01	Wine grape	plasma membrane	30.16	41.12
VIT_10s0042g00700.t01	Wine grape	plasma membrane	28.91	41.04
VIT_07s0005g04100.t01	Wine grape	plasma membrane	39.18	40.29
VIT_07s0005g04040.t01	Wine grape	plasma membrane	40.27	39.54
KRH07069	Soybean	endoplasmic reticulum	26.57	39.41
VIT_07s0005g04020.t01	Wine grape	plasma membrane	40.1	39.38
VIT_07s0005g04050.t01	Wine grape	plasma membrane	39.93	39.21
VIT_10s0042g00770.t01	Wine grape	plasma membrane	28.57	39.13
KRH07065	Soybean	plasma membrane	45.61	34.93
VIT_07s0005g04070.t01	Wine grape	plasma membrane	25.56	34.62
VIT_17s0000g02360.t01	Wine grape	plasma membrane	35.76	25.66
VIT_14s0108g00280.t01	Wine grape	plasma membrane	28.07	23.58

Protein Annotations

Gene3D:1.10.510.10	EntrezGene:100246346	wikigene:100246346	MapMan:18.4.1.12	Gene3D:3.30.200.20	Gene3D:3.80.10.10
ProteinID:CCB48650	ProteinID:CCB48650.1	UniProt:F6H943	EMBL:FN595497	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0004672	GO:GO:0005488	GO:GO:0005515	GO:GO:0005524	GO:GO:0005575
GO:GO:0006464	GO:GO:0006468	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016301	GO:GO:0016740	GO:GO:0019538	InterPro:IPR000719	InterPro:IPR001611
InterPro:IPR032675	InterPro:Kinase-like_dom_sf	EntrezGene:LOC100246346	wikigene:LOC100246346	InterPro:LRR_N_plant-typ	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00069	PFAM:PF08263	PFAM:PF13855	PRINTS:PR00019
ScanProsite:PS00107	ScanProsite:PS00109	PFscan:PS50011	PFscan:PS51450	PANTHER:PTHR27000	PANTHER:PTHR27000:SF241
InterPro:Prot_kinase_dom	InterPro:Protein_kinase_ATP_BS	SMART:SM00365	SMART:SM00369	SUPFAM:SSF52047	SUPFAM:SSF52058
SUPFAM:SSF56112	TIGR:TC67608	TMHMM:TMhelix	InterPro:Tyr_kinase_AS	UniParc:UPI0002109269	ArrayExpress:VIT_12s0034g02570
EnsemblPlantsGene:VIT_12s0034g02570	EnsemblPlants:VIT_12s0034g02570.t01	RefSeq:XP_003633374	RefSeq:XP_003633374.1	RefSeq:XP_010657639.1	RefSeq:XP_010657640.1
RefSeq:XP_010657641.1	RefSeq:XP_010657642.1	RefSeq:XP_010657643.1	RefSeq:XP_010657644.1	RefSeq:XP_010657645.1	SEG:seg

Description

No Description!

Coordinates

chr12:-:19037584..19041987

Molecular Weight (calculated)

132069.0 Da

IEP (calculated)

7.236

GRAVY (calculated)

0.004

Length

1197 amino acids

Sequence
(BLAST)

0001: MTLEYSSSYS LLPRLIITPC FFIFLLFLLY SISSFHVTFT FASTPITSFS KVEQDQEALA LLTWKASLDN QTQSFLFSWS GRNSCHHWFG VTCHRSGSVS
0101: DLDLQSCGLR GTLHKLNFSS LSNLLTLNLY NNSLYGTIPI NIGNLSKLII VLDFRFNHFI GVISDQFGFL TSLSFLALSS NNFKGPIPPS IGNLRNLTTL
0201: YLNSNNLSGS IPQEIGLLRS LNVIDLSTNN LIGSIPPSIG NLRNLTTLLL PRNKLSGFIP QEIGLLRSLT GIDLSTNNLI GPIPSSIGNL RNLTTLYLNS
0301: NNLSDSIPQE ITLLRSLNYL VLSYNNLNGS LPTSIENWKN LIILYIYGNQ LSGSIPEEIG LLTSLENLDL ANNNLSGSIP ASLGNLSKLS LLYLYGNKLS
0401: GFIPQEFELL RSLIVLELGS NNLTGPIPSF VGNLRNLTTL YLSQNDLSGY IPREIGLLRL LNILDLSFNN LSGSIPASIG NLSSLTTLAL HSNKLSGAIP
0501: REMNNVTHLK SLQIGENNFI GHLPQEICLG NALEKVSAAR NHFTGPIPKS LKNCTSLFRV RLEKNQLTGD IAESFGVYPN LNYIDLSNNN FYGELSEKWG
0601: ECHMLTNLNI SNNKISGAIP PQLGKAIQLQ QLDLSSNHLI GKIPKELGML PLLFKLLLGN NKLSGSIPLE LGNLSDLEIL DLASNNLSGP IPKQLGNFWK
0701: LWSLNMSENR FVDSIPDEIG KMHHLQSLDL SQNMLTGEMP PRLGELQNLE TLNLSHNGLS GTIPHTFDDL RSLTVADISY NQLEGPLPNI NAFAPFEAFK
0801: NNKGLCGNNV THLKPCSASR KKANKFSILI IILLIVSSLL FLFAFVIGIF FLFQKLRKRK TKSPKADVED LFAIWGHDGE LLYEHIIQGT DNFSSKQCIG
0901: TGGYGTVYKA ELPTGRVVAV KKLHSSQDGD MADLKAFKSE IHALTQIRHR NIVKLYGFSL FAENSFLVYE FMEKGSLRSI LRNDEEAEKL DWIVRLNVVK
1001: GVAKALSYMH HDCSPPIIHR DISSNNVLLD SEYEAHVSDF GTARLLKSDS SNWTSFAGTF GYTAPELAYS MKVDYKTDVY SYGVVTLEVI MGRHPGELIS
1101: SLLSSASSSS TSPSTADHFL LNDVIDQRPS PPVNQVAKEV EVAVKLAFAC LRVNPQSRPT MQQVARALST QWPPLSKPFS MITLLELQDH GHGGETS

Best Arabidopsis Sequence Match ( AT1G35710.1 )
(BLAST)

0001: MGFAEKNLYD FRFLLFISII LSCSISASAT IAEANALLKW KSTFTNSSKL SSWVHDANTN TSFSCTSWYG VSCNSRGSIE ELNLTNTGIE GTFQDFPFIS
0101: LSNLAYVDLS MNLLSGTIPP QFGNLSKLIY FDLSTNHLTG EISPSLGNLK NLTVLYLHQN YLTSVIPSEL GNMESMTDLA LSQNKLTGSI PSSLGNLKNL
0201: MVLYLYENYL TGVIPPELGN MESMTDLALS QNKLTGSIPS TLGNLKNLMV LYLYENYLTG VIPPEIGNME SMTNLALSQN KLTGSIPSSL GNLKNLTLLS
0301: LFQNYLTGGI PPKLGNIESM IDLELSNNKL TGSIPSSLGN LKNLTILYLY ENYLTGVIPP ELGNMESMID LQLNNNKLTG SIPSSFGNLK NLTYLYLYLN
0401: YLTGVIPQEL GNMESMINLD LSQNKLTGSV PDSFGNFTKL ESLYLRVNHL SGAIPPGVAN SSHLTTLILD TNNFTGFFPE TVCKGRKLQN ISLDYNHLEG
0501: PIPKSLRDCK SLIRARFLGN KFTGDIFEAF GIYPDLNFID FSHNKFHGEI SSNWEKSPKL GALIMSNNNI TGAIPTEIWN MTQLVELDLS TNNLFGELPE
0601: AIGNLTNLSR LRLNGNQLSG RVPAGLSFLT NLESLDLSSN NFSSEIPQTF DSFLKLHDMN LSRNKFDGSI PRLSKLTQLT QLDLSHNQLD GEIPSQLSSL
0701: QSLDKLDLSH NNLSGLIPTT FEGMIALTNV DISNNKLEGP LPDTPTFRKA TADALEENIG LCSNIPKQRL KPCRELKKPK KNGNLVVWIL VPILGVLVIL
0801: SICANTFTYC IRKRKLQNGR NTDPETGENM SIFSVDGKFK YQDIIESTNE FDPTHLIGTG GYSKVYRANL QDTIIAVKRL HDTIDEEISK PVVKQEFLNE
0901: VKALTEIRHR NVVKLFGFCS HRRHTFLIYE YMEKGSLNKL LANDEEAKRL TWTKRINVVK GVAHALSYMH HDRITPIVHR DISSGNILLD NDYTAKISDF
1001: GTAKLLKTDS SNWSAVAGTY GYVAPEFAYT MKVTEKCDVY SFGVLILELI IGKHPGDLVS SLSSSPGEAL SLRSISDERV LEPRGQNREK LLKMVEMALL
1101: CLQANPESRP TMLSISTTFS

Arabidopsis Description

Probable leucine-rich repeat receptor-like protein kinase At1g35710 [Source:UniProtKB/Swiss-Prot;Acc:Q9LP24]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.