CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

nucleus 2
mitochondrion 2
extracellular 3
cytosol 1
endoplasmic reticulum 2
vacuole 3
plasma membrane 2
golgi 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU86683	Sorghum	extracellular	46.61	45.93
EER88301	Sorghum	extracellular	44.25	45.32
OQU75581	Sorghum	extracellular	43.95	45.29
EES17115	Sorghum	extracellular	46.9	45.17
EES18450	Sorghum	extracellular	42.18	43.87
EER89667	Sorghum	extracellular	42.77	43.67
EER95724	Sorghum	plastid	44.25	43.6
EER88299	Sorghum	extracellular, golgi	43.07	43.07
EER95723	Sorghum	extracellular	41.59	41.96
EES02383	Sorghum	extracellular	40.71	41.69
EER88826	Sorghum	extracellular	40.41	41.39
EES06321	Sorghum	extracellular, golgi, plastid	42.18	40.62
EES16804	Sorghum	extracellular, golgi	40.12	39.88
EES12895	Sorghum	extracellular	40.41	39.48
EER95727	Sorghum	extracellular, vacuole	39.23	39.35
EES18451	Sorghum	extracellular	39.53	38.62
EES08383	Sorghum	extracellular, vacuole	38.05	37.83
EES03738	Sorghum	extracellular, plasma membrane	37.17	36.21
EER95725	Sorghum	extracellular	38.94	35.87
KXG38160	Sorghum	plastid	40.71	34.41

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	EntrezGene:8081200	UniProt:A0A1Z5S4B4
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576
GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016491	GO:GO:0020037	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869
InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	EnsemblPlants:OQU90787	ProteinID:OQU90787	ProteinID:OQU90787.1
PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436	PFscan:PS50873
PANTHER:PTHR31235	PANTHER:PTHR31235:SF156	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	EnsemblPlantsGene:SORBI_3001G045100
SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A82079	RefSeq:XP_002463683.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:3354034..3356042

Molecular Weight (calculated)

36196.9 Da

IEP (calculated)

6.831

GRAVY (calculated)

-0.087

Length

339 amino acids

Sequence
(BLAST)

001: MHMAACTRTS TGSNKPPSLC LLLLVHALLL AIASSPAGGL QVGFYQQTCP QAESIVRNVT WARAAADPSL AGKLLRLYFH DCFPQGCDAS VLLDGRGTEK
101: AAPPNQSLGG LDVVDAAKAA LEAACPGTVS CADVVALATR DAVSFQFRRS LWQVETGRRD NRFSDEAHAT DLPSPEFVFP LLRDSFAKRG LGVRDLVALS
201: GAHTLGHTDC QFVSPRLYTF QGNGGVDPFI DPSYARELMR QCPATPPPSS SSSSGKVALD PGSEFTFDTS YYATIKANRG ALHTDSVLLH DDEAARLVDE
301: MHDQGKFLTA FAASIQKLGA FGVITGNKGE IRRNCHVVN

Best Arabidopsis Sequence Match ( AT2G39040.1 )
(BLAST)

001: MANKSLEIRF LFPLVLFLVV KLLCVDGKGF NNNGHKIRKG RWEGKLKMNF YHNSCPGAED IVRQIVWKKV EANRSLAPKL LRVHYHDCFV RGCDASLLLD
101: SVAGKAVSEK EARPNLSLSG FEIIDEIKYI LEKRCPNTVS CADILTLAAR DAVSYEFERP LWNVFTGRVD GRVSLATEAA RDLPSAGANF TTLQKLFAES
201: DLDVVDLVAL SGAHTIGIAH CGVFGRRLLN FTGKGDTDPS LNPSYASFLK SECSDKSLRL NPSAVVGMDP TGPLAFDSGY FVSLLKNKGL FTSDAALLTD
301: PSAAHIASVF QNSGAFLAQF GRSMIKMSSI KVLTLGDQGG EIRKNCRLVN

Arabidopsis Description

PER24Peroxidase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV04]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.