CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: golgi, plastid, extracellular

Predictor Summary:

plastid 4
mitochondrion 2
extracellular 3
cytosol 1
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi, plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
OQU92006

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05260.1	OQU92006	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d053839_P001	Maize	extracellular	48.86	77.48
TraesCS6A01G136500.1	Wheat	extracellular	69.6	74.92
Os02t0161800-01	Rice	extracellular, mitochondrion	73.58	74.43
TraesCS6D01G125500.1	Wheat	extracellular	70.74	72.38
TraesCS6B01G164400.2	Wheat	extracellular	70.45	72.3
HORVU6Hr1G026230.5	Barley	extracellular	70.45	72.09
EER88826	Sorghum	extracellular	56.25	59.82
GSMUA_Achr9P30170_001	Banana	extracellular	48.86	58.11
Solyc07g052510.2.1	Tomato	extracellular	51.99	55.79
PGSC0003DMT400065518	Potato	extracellular	51.42	55.18
KRH22535	Soybean	extracellular	50.57	54.94
GSMUA_Achr2P03020_001	Banana	extracellular	47.44	54.93
KRH26821	Soybean	endoplasmic reticulum	50.28	54.29
PGSC0003DMT400038889	Potato	extracellular	49.72	53.52
Solyc05g046020.2.1	Tomato	extracellular	49.72	53.52
KRH22534	Soybean	extracellular	49.43	53.37
CDY13252	Canola	extracellular	49.43	53.37
KRH26822	Soybean	endoplasmic reticulum	49.43	53.37
PGSC0003DMT400013504	Potato	extracellular	49.43	53.21
Solyc05g046030.2.1	Tomato	extracellular	49.43	53.21
Bra035235.1-P	Field mustard	extracellular	49.15	53.07
CDX86795	Canola	extracellular	49.15	53.07
AT4G11290.1	Thale cress	extracellular	48.86	52.76
CDY10037	Canola	extracellular	48.86	52.76
CDY59800	Canola	extracellular	48.58	52.45
PGSC0003DMT400065517	Potato	extracellular	48.86	52.28
PGSC0003DMT400065516	Potato	extracellular	48.86	52.28
CDY46845	Canola	extracellular	48.3	52.15
Solyc07g052540.2.1	Tomato	extracellular	48.58	51.98
Bra015404.1-P	Field mustard	extracellular	48.01	51.84
AT1G05260.1	Thale cress	extracellular	48.01	51.84
PGSC0003DMT400013520	Potato	extracellular	48.01	51.68
AT3G21770.1	Thale cress	extracellular	48.3	51.67
Solyc07g052530.2.1	Tomato	extracellular	48.3	51.67
KRH56093	Soybean	extracellular	47.44	51.38
Solyc05g046010.2.1	Tomato	extracellular	47.73	51.38
CDY49518	Canola	extracellular	47.44	51.23
Bra032474.1-P	Field mustard	extracellular	41.76	51.22
EER95723	Sorghum	extracellular	48.86	51.19
Solyc07g052550.1.1	Tomato	extracellular	47.73	51.06
Solyc07g049240.2.1	Tomato	extracellular	48.01	51.06
CDY38641	Canola	extracellular	47.16	50.92
Bra031309.1-P	Field mustard	extracellular	47.16	50.92
CDY55649	Canola	vacuole	46.88	50.15
Bra023862.1-P	Field mustard	vacuole	46.88	50.15
Solyc07g047740.2.1	Tomato	extracellular	47.16	50.15
PGSC0003DMT400001848	Potato	extracellular	47.16	50.15
CDY19299	Canola	vacuole	46.59	49.85
EES18450	Sorghum	extracellular	46.02	49.69
KRH56092	Soybean	extracellular, mitochondrion	45.74	49.69
OQU75581	Sorghum	extracellular	46.02	49.24
EER89667	Sorghum	extracellular	46.02	48.8
CDY10042	Canola	extracellular	22.44	48.77
EER88301	Sorghum	extracellular	45.45	48.34
KRH25412	Soybean	extracellular	44.32	48.15
EER88299	Sorghum	extracellular, golgi	46.31	48.08
EER95724	Sorghum	plastid	46.31	47.38
EES12895	Sorghum	extracellular	46.59	47.26
EES17115	Sorghum	extracellular	46.02	46.02
CDY33143	Canola	extracellular	47.44	45.75
Solyc04g056420.1.1	Tomato	extracellular	35.23	45.42
EES03738	Sorghum	extracellular, plasma membrane	43.47	43.97
OQU90787	Sorghum	extracellular, vacuole	40.62	42.18
EES02383	Sorghum	extracellular	39.2	41.69
EER95727	Sorghum	extracellular, vacuole	39.77	41.42
OQU86683	Sorghum	extracellular	40.06	40.99
EES16804	Sorghum	extracellular, golgi	39.2	40.47
KXG38160	Sorghum	plastid	44.6	39.15
EES18451	Sorghum	extracellular	38.07	38.62
EES08383	Sorghum	extracellular, vacuole	36.65	37.83
KRH25410	Soybean	cytosol	26.42	37.8
EER95725	Sorghum	extracellular	38.92	37.23
PGSC0003DMT400001851	Potato	extracellular	47.44	28.21

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	EntrezGene:8074673	UniProt:C5XVF5
EnsemblPlants:EES06321	ProteinID:EES06321	ProteinID:EES06321.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601
GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009505	GO:GO:0009506
GO:GO:0009664	GO:GO:0009987	GO:GO:0016043	GO:GO:0016491	GO:GO:0020037	GO:GO:0030312
GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436
PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF47	MetaCyc:PWY-5461	MetaCyc:PWY-5466	MetaCyc:PWY-5469
MetaCyc:PWY-6824	MetaCyc:PWY-7214	MetaCyc:PWY-7445	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS
EnsemblPlantsGene:SORBI_3004G049800	SUPFAM:SSF48113	unigene:Sbi.8061	InterPro:Secretory_peroxidase	TMHMM:TMhelix	UniParc:UPI0001A85A60
RefSeq:XP_002453345.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:4024677..4027607

Molecular Weight (calculated)

37295.7 Da

IEP (calculated)

8.400

GRAVY (calculated)

0.090

Length

352 amino acids

Sequence
(BLAST)

001: MAVSTRRRHS SSRMVAVPAP VVLGVAMVVV VLASSATGAS GQLRMGFYAE SCPGVERMVG DFVRQHVRRV PTVAAALLRL HFHDCFVRGC DASVLLNSTA
101: GSVAEKDAPP NLTLRGFDFV DRVKTLVEEA CPGVVSCADV LALAARDAVV AIGGPSWRVP TGRRDGTVST MQEALNDIPK HTMTFQQLAN LFASKGLGVR
201: DLVWLSGAHT IGIAHCSSFA DRLYGYPGAG AGNDTTDPSL DATYAANLRR RKCRAASGGY AEDAVVEMDP GSHLTFDLGY YRALLKHRGL LRSDAALLTD
301: AAARADVESV VGGAEEVYFQ VFARSMARLA TVQVKTGAEG EIRRNCAVVN GG

Best Arabidopsis Sequence Match ( AT4G11290.1 )
(BLAST)

001: MTRFGLALLM ILVIQGLVTF SEAQLKMGFY DQTCPYAEKI VQDVVNQHIN NAPSLAAGLI RMHFHDCFVR GCDGSILINA TSSNQQVEKL APPNLTVRGF
101: DFIDKVKSAL ESKCPGIVSC ADIITLATRD SIVAIGGPTW NVPTGRRDGR ISNFAEAMNN IPPPFGNFTT LITLFGNQGL DVKDLVLLSG AHTIGVSHCS
201: SFSNRLFNFT GVGDQDPSLD SEYADNLKSR RCLSIADNTT KVEMDPGSRN TFDLSYYRLV LKRRGLFESD AALTMNPAAL AQVKRFAGGS EQEFFAEFSN
301: SMEKMGRIGV KTGSDGEIRR TCAFVN

Arabidopsis Description

PER39Peroxidase 39 [Source:UniProtKB/Swiss-Prot;Acc:Q9SUT2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.