Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- extracellular 7
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc04g008430.1.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G05260.1 | Solyc04g008430.1.1 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc07g052540.2.1 | Tomato | extracellular | 97.87 | 97.87 |
| PGSC0003DMT400065517 | Potato | extracellular | 97.26 | 97.26 |
| PGSC0003DMT400065516 | Potato | extracellular | 95.44 | 95.44 |
| Solyc07g052550.1.1 | Tomato | extracellular | 92.71 | 92.71 |
| Solyc07g049240.2.1 | Tomato | extracellular | 83.28 | 82.78 |
| Solyc07g047740.2.1 | Tomato | extracellular | 83.28 | 82.78 |
| Solyc05g046020.2.1 | Tomato | extracellular | 79.94 | 80.43 |
| Solyc05g046030.2.1 | Tomato | extracellular | 79.33 | 79.82 |
| Solyc05g046010.2.1 | Tomato | extracellular | 78.12 | 78.59 |
| Solyc07g052510.2.1 | Tomato | extracellular | 76.6 | 76.83 |
| Solyc04g056420.1.1 | Tomato | extracellular | 61.4 | 73.99 |
| Bra032474.1-P | Field mustard | extracellular | 61.4 | 70.38 |
| CDY10037 | Canola | extracellular | 68.39 | 69.02 |
| CDY46845 | Canola | extracellular | 68.09 | 68.71 |
| CDY59800 | Canola | extracellular | 68.09 | 68.71 |
| Bra015404.1-P | Field mustard | extracellular | 67.78 | 68.4 |
| KRH26822 | Soybean | endoplasmic reticulum | 67.48 | 68.1 |
| KRH22534 | Soybean | extracellular | 67.17 | 67.79 |
| KRH26821 | Soybean | endoplasmic reticulum | 66.87 | 67.48 |
| GSMUA_Achr2P03020_001 | Banana | extracellular | 62.31 | 67.43 |
| KRH22535 | Soybean | extracellular | 66.26 | 67.28 |
| AT1G05260.1 | Thale cress | extracellular | 66.57 | 67.18 |
| CDY49518 | Canola | extracellular | 66.57 | 67.18 |
| CDX86795 | Canola | extracellular | 65.96 | 66.56 |
| Bra035235.1-P | Field mustard | extracellular | 65.96 | 66.56 |
| CDY13252 | Canola | extracellular | 65.65 | 66.26 |
| GSMUA_Achr9P30170_001 | Banana | extracellular | 59.57 | 66.22 |
| KRH56093 | Soybean | extracellular | 65.05 | 65.85 |
| CDY38641 | Canola | extracellular | 65.05 | 65.64 |
| Bra031309.1-P | Field mustard | extracellular | 65.05 | 65.64 |
| AT4G11290.1 | Thale cress | extracellular | 64.44 | 65.03 |
| CDY55649 | Canola | vacuole | 64.13 | 64.13 |
| CDY19299 | Canola | vacuole | 64.13 | 64.13 |
| Bra023862.1-P | Field mustard | vacuole | 64.13 | 64.13 |
| AT3G21770.1 | Thale cress | extracellular | 63.53 | 63.53 |
| KRH56092 | Soybean | extracellular, mitochondrion | 62.01 | 62.96 |
| KRH25412 | Soybean | extracellular | 61.7 | 62.65 |
| EER88826 | Sorghum | extracellular | 62.01 | 61.63 |
| TraesCS7D01G442300.1 | Wheat | extracellular | 59.27 | 58.73 |
| TraesCS7B01G353200.1 | Wheat | extracellular | 58.97 | 58.61 |
| TraesCS7A01G453000.1 | Wheat | extracellular | 58.97 | 58.61 |
| CDY33143 | Canola | extracellular | 64.44 | 58.08 |
| HORVU7Hr1G102480.7 | Barley | extracellular | 58.97 | 57.4 |
| TraesCS7A01G452900.1 | Wheat | extracellular | 57.75 | 57.23 |
| TraesCS7D01G442200.1 | Wheat | extracellular | 57.14 | 56.63 |
| Os06t0681600-01 | Rice | extracellular | 57.75 | 56.38 |
| Zm00001d014467_P002 | Maize | vacuole | 61.09 | 55.68 |
| Solyc05g046000.2.1 | Tomato | extracellular | 54.1 | 55.28 |
| Solyc08g075830.2.1 | Tomato | extracellular | 51.98 | 53.11 |
| Solyc12g005790.1.1 | Tomato | extracellular | 51.98 | 52.78 |
| KRH25410 | Soybean | cytosol | 39.21 | 52.44 |
| Solyc12g005370.1.1 | Tomato | extracellular | 52.28 | 52.44 |
| Solyc01g067850.2.1 | Tomato | extracellular | 51.37 | 52.16 |
| TraesCS6A01G136500.1 | Wheat | extracellular | 51.37 | 51.68 |
| TraesCS7B01G353100.1 | Wheat | extracellular | 57.45 | 51.5 |
| CDY10042 | Canola | extracellular | 25.23 | 51.23 |
| TraesCS6D01G125500.1 | Wheat | extracellular | 51.98 | 49.71 |
| TraesCS6B01G164400.2 | Wheat | extracellular | 51.67 | 49.56 |
| Os02t0161800-01 | Rice | extracellular, mitochondrion | 51.98 | 49.14 |
| EES06321 | Sorghum | extracellular, golgi, plastid | 51.67 | 48.3 |
| HORVU6Hr1G026230.5 | Barley | extracellular | 50.15 | 47.97 |
| Solyc01g067880.1.1 | Tomato | mitochondrion | 37.08 | 47.1 |
| Solyc01g067860.2.1 | Tomato | extracellular | 46.81 | 46.95 |
| Solyc06g054500.1.1 | Tomato | extracellular | 45.29 | 45.85 |
| Solyc02g064970.2.1 | Tomato | extracellular | 44.98 | 45.4 |
| Solyc01g105070.2.1 | Tomato | extracellular | 44.98 | 44.58 |
| Zm00001d053839_P001 | Maize | extracellular | 28.88 | 42.79 |
| Solyc01g104860.2.1 | Tomato | extracellular | 40.12 | 41.25 |
| Solyc01g067870.2.1 | Tomato | extracellular | 46.2 | 40.32 |
| Solyc10g047110.1.1 | Tomato | extracellular | 34.65 | 39.86 |
| Solyc04g064690.2.1 | Tomato | extracellular, vacuole | 38.91 | 33.07 |
Protein Annotations
| KEGG:00940+1.11.1.7 | Gene3D:1.10.420.10 | Gene3D:1.10.520.10 | MapMan:35.1 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004601 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 |
| GO:GO:0005623 | GO:GO:0006950 | GO:GO:0006979 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009505 | GO:GO:0009506 | GO:GO:0009664 | GO:GO:0009987 | GO:GO:0016043 | GO:GO:0016491 |
| GO:GO:0020037 | GO:GO:0030312 | GO:GO:0042744 | GO:GO:0046872 | GO:GO:0055114 | GO:GO:0098869 |
| InterPro:Haem_peroxidase | InterPro:Haem_peroxidase_pln/fun/bac | InterPro:IPR002016 | UniProt:K4CFF2 | PFAM:PF00141 | PRINTS:PR00458 |
| PRINTS:PR00461 | ScanProsite:PS00435 | ScanProsite:PS00436 | PFscan:PS50873 | PANTHER:PTHR31235 | PANTHER:PTHR31235:SF39 |
| InterPro:Peroxidase_pln | InterPro:Peroxidases_AS | InterPro:Peroxidases_heam-ligand_BS | SUPFAM:SSF48113 | InterPro:Secretory_peroxidase | SignalP:SignalP-noTM |
| EnsemblPlantsGene:Solyc07g052530.2 | EnsemblPlants:Solyc07g052530.2.1 | UniParc:UPI000276B82D | : | : | : |
Description
Peroxidase [Source:UniProtKB/TrEMBL;Acc:K4CFF2]
Coordinates
chr7:+:61029695..61031406
Molecular Weight (calculated)
35653.8 Da
IEP (calculated)
8.785
GRAVY (calculated)
-0.023
Length
329 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTFGLGFFV ICIVGIFLDA SHAQLQLNFY AKSCPKAEKI IEDYVHKHIP NAPSLAAALL RLHFHDCFVR GCDGSVLLNF TSSTKNQTEK VAVPNQTLRG
101: FSFIDGVKKI VEAECPGVVS CADIVTLVAR NSVVVTGGPF WNVPTGRRDG KISNASEALA NIPPPTSNLS SLQTSFANKG LDLKDLVLLS GAHTIGVSHC
201: SSFSARLYNF TGVLGSQDPS LDSEYASNLK GKKCKSINDN TTIVEMDPGS FRTFDLSYYK LLLKRRGLFQ SDAALTTSAT TKSFINQLVK GSLEEFNAEF
301: AKAMEKMGRI EVKTGSAGEI RKQCAFVNK
101: FSFIDGVKKI VEAECPGVVS CADIVTLVAR NSVVVTGGPF WNVPTGRRDG KISNASEALA NIPPPTSNLS SLQTSFANKG LDLKDLVLLS GAHTIGVSHC
201: SSFSARLYNF TGVLGSQDPS LDSEYASNLK GKKCKSINDN TTIVEMDPGS FRTFDLSYYK LLLKRRGLFQ SDAALTTSAT TKSFINQLVK GSLEEFNAEF
301: AKAMEKMGRI EVKTGSAGEI RKQCAFVNK
001: MNCLIAIALS VSFFLVGIVG PIQAQLQMNF YANSCPNAEK IVQDFVSNHV SNAPSLAAAL IRMHFHDCFV RGCDGSVLIN STSGNAERDA TPNLTVRGFG
101: FIDAIKSVLE AQCPGIVSCA DIIALASRDA VVFTGGPNWS VPTGRRDGRI SNAAEALANI PPPTSNITNL QTLFANQGLD LKDLVLLSGA HTIGVSHCSS
201: FTNRLYNFTG RGGQDPALDS EYAANLKSRK CPSLNDNKTI VEMDPGSRKT FDLSYYQLVL KRRGLFQSDS ALTTNPTTLS NINRILTGSV GSFFSEFAKS
301: MEKMGRINVK TGSAGVVRRQ CSVANS
101: FIDAIKSVLE AQCPGIVSCA DIIALASRDA VVFTGGPNWS VPTGRRDGRI SNAAEALANI PPPTSNITNL QTLFANQGLD LKDLVLLSGA HTIGVSHCSS
201: FTNRLYNFTG RGGQDPALDS EYAANLKSRK CPSLNDNKTI VEMDPGSRKT FDLSYYQLVL KRRGLFQSDS ALTTNPTTLS NINRILTGSV GSFFSEFAKS
301: MEKMGRINVK TGSAGVVRRQ CSVANS
Arabidopsis Description
PER3Peroxidase [Source:UniProtKB/TrEMBL;Acc:Q0WSR2]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.