CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
CDY03088
CDY17621

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05260.1	CDY03088	AT2G01950.1	19000166
AT1G05260.1	CDY17621	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46845	Canola	extracellular	96.93	96.93
Bra015404.1-P	Field mustard	extracellular	96.63	96.63
CDY10037	Canola	extracellular	92.94	92.94
CDY59800	Canola	extracellular	92.94	92.94
AT1G05260.1	Thale cress	extracellular	89.26	89.26
CDY10042	Canola	extracellular	40.49	81.48
CDY38641	Canola	extracellular	71.17	71.17
Solyc07g049240.2.1	Tomato	extracellular	68.71	67.67
CDY19299	Canola	vacuole	68.1	67.48
CDY55649	Canola	vacuole	67.79	67.17
Solyc07g047740.2.1	Tomato	extracellular	68.1	67.07
KRH22535	Soybean	extracellular	66.26	66.67
PGSC0003DMT400065516	Potato	extracellular	67.18	66.57
PGSC0003DMT400065517	Potato	extracellular	67.18	66.57
Solyc07g052530.2.1	Tomato	extracellular	67.18	66.57
Solyc07g052540.2.1	Tomato	extracellular	67.18	66.57
CDY13252	Canola	extracellular	66.26	66.26
CDX86795	Canola	extracellular	65.95	65.95
KRH26821	Soybean	endoplasmic reticulum	65.95	65.95
PGSC0003DMT400001848	Potato	extracellular	66.87	65.86
KRH22534	Soybean	extracellular	65.64	65.64
PGSC0003DMT400013504	Potato	extracellular	65.64	65.44
Solyc07g052510.2.1	Tomato	extracellular	65.64	65.24
PGSC0003DMT400038889	Potato	extracellular	65.34	65.14
KRH26822	Soybean	endoplasmic reticulum	65.03	65.03
PGSC0003DMT400065518	Potato	extracellular	65.34	64.94
Solyc05g046020.2.1	Tomato	extracellular	65.03	64.83
PGSC0003DMT400013520	Potato	extracellular	64.72	64.53
Solyc05g046010.2.1	Tomato	extracellular	64.72	64.53
Solyc05g046030.2.1	Tomato	extracellular	64.42	64.22
CDY33143	Canola	extracellular	71.47	63.84
Solyc07g052550.1.1	Tomato	extracellular	64.42	63.83
KRH56093	Soybean	extracellular	61.66	61.85
Solyc04g056420.1.1	Tomato	extracellular	50.92	60.81
KRH25412	Soybean	extracellular	59.82	60.19
KRH56092	Soybean	extracellular, mitochondrion	59.2	59.57
GSMUA_Achr9P30170_001	Banana	extracellular	53.99	59.46
EER88826	Sorghum	extracellular	58.9	58.01
GSMUA_Achr2P03020_001	Banana	extracellular	53.37	57.24
TraesCS7D01G442300.1	Wheat	extracellular	58.28	57.23
TraesCS7A01G453000.1	Wheat	extracellular	57.67	56.8
TraesCS7B01G353200.1	Wheat	extracellular	57.67	56.8
HORVU7Hr1G102480.7	Barley	extracellular	58.59	56.51
Os06t0681600-01	Rice	extracellular	57.06	55.19
CDY55811	Canola	extracellular, golgi, vacuole	53.99	55.17
CDY37537	Canola	extracellular	53.07	54.23
TraesCS7A01G452900.1	Wheat	extracellular	55.21	54.22
TraesCS7D01G442200.1	Wheat	extracellular	54.91	53.92
CDY43275	Canola	extracellular	52.15	53.29
Zm00001d014467_P002	Maize	vacuole	57.98	52.35
TraesCS6A01G136500.1	Wheat	extracellular	50.31	50.15
CDX85056	Canola	extracellular	50.61	50.15
KRH25410	Soybean	cytosol	37.73	50.0
CDX85561	Canola	extracellular	50.0	49.39
CDY69305	Canola	extracellular	48.16	48.91
CDX91005	Canola	extracellular	49.39	48.79
TraesCS7B01G353100.1	Wheat	extracellular	54.91	48.77
CDY70734	Canola	extracellular	34.97	48.72
TraesCS6B01G164400.2	Wheat	extracellular	50.92	48.4
Os02t0161800-01	Rice	extracellular, mitochondrion	51.23	47.99
CDY10039	Canola	extracellular	47.55	47.99
TraesCS6D01G125500.1	Wheat	extracellular	50.31	47.67
EES06321	Sorghum	extracellular, golgi, plastid	51.23	47.44
CDY49517	Canola	extracellular	46.32	47.19
CDY46844	Canola	extracellular, golgi	45.71	46.56
CDY65911	Canola	extracellular	44.79	46.5
CDY15538	Canola	extracellular	47.24	46.39
HORVU6Hr1G026230.5	Barley	extracellular	48.77	46.22
CDY59801	Canola	extracellular	47.55	46.13
CDY65910	Canola	extracellular	47.55	46.13
CDY65912	Canola	extracellular	45.09	45.79
CDX75919	Canola	extracellular	45.4	45.68
CDY10038	Canola	extracellular	46.32	45.48
CDY55444	Canola	extracellular	46.32	45.48
CDY15537	Canola	extracellular	29.45	45.28
CDY46843	Canola	extracellular	44.48	45.17
CDY49516	Canola	extracellular	44.17	44.86
CDY10040	Canola	extracellular	43.56	44.24
CDY55446	Canola	extracellular	46.01	44.12
CDY37007	Canola	extracellular	42.64	43.71
Zm00001d053839_P001	Maize	extracellular	29.75	43.69
CDY22526	Canola	extracellular	39.57	42.43
CDY43791	Canola	extracellular	42.64	42.38
CDY50836	Canola	extracellular	42.64	42.38
CDY07679	Canola	endoplasmic reticulum, extracellular, golgi	46.63	42.34
CDY14412	Canola	extracellular, golgi	46.63	42.34
CDY35411	Canola	extracellular	42.33	42.2
CDX89378	Canola	extracellular	42.02	42.02
CDX94393	Canola	extracellular	42.02	42.02
CDY66486	Canola	extracellular	42.02	41.77
CDY06919	Canola	extracellular	41.72	41.72
CDY14775	Canola	extracellular	41.41	41.41
CDY31334	Canola	extracellular	41.41	41.28
CDY39825	Canola	extracellular	41.41	41.16
CDY39826	Canola	extracellular, golgi	41.41	40.54
CDX79195	Canola	extracellular	39.57	40.44
CDX69544	Canola	extracellular	50.61	39.95
CDY31335	Canola	extracellular	40.49	39.64
CDX84492	Canola	extracellular	25.15	39.23
CDX84491	Canola	extracellular	40.18	39.22
CDX84494	Canola	extracellular	40.18	39.22
CDY43789	Canola	extracellular	40.18	39.22
CDX88340	Canola	mitochondrion	40.18	38.87
CDX84495	Canola	extracellular	39.57	38.74
CDY43790	Canola	extracellular	39.26	38.44
CDY38365	Canola	extracellular	39.57	38.39
PGSC0003DMT400001851	Potato	extracellular	66.26	36.49
CDX87544	Canola	cytosol, golgi, plasma membrane	39.88	35.91

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:A0A078IKF4	UniProt:A0A078IKF4
EnsemblPlants:CDY49518	ProteinID:CDY49518	ProteinID:CDY49518.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601
GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037	GO:GO:0042744
GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	EnsemblPlantsGene:GSBRNA2T00093206001	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436
PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF39	MetaCyc:PWY-5461	MetaCyc:PWY-7214	MetaCyc:PWY-7445
InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0004EEE61B	SEG:seg	:	:	:

Description

BnaC05g03300DPeroxidase [Source:UniProtKB/TrEMBL;Acc:A0A078IKF4]

Coordinates

chrLK032838:+:74347..77039

Molecular Weight (calculated)

35227.2 Da

IEP (calculated)

8.747

GRAVY (calculated)

-0.072

Length

326 amino acids

Sequence
(BLAST)

001: MRCLTTVALS LSLFLVGLVG PIQGQLQMNF HANTCPNAEK IVQDFVSNHI SNAPSLAAAL LRMHFHDCFV RGCDGSVLIN SRSGNAEKDA APNLTVRGFG
101: FIEAIKAVLE AQCPGIVSCA DIIALASRDA IVFTGGPNWS VPTGRRDGRI SNASEALANI PPPTSNFTNL QTRFANQGLD LKDLVLLSGA HTIGVSHCSS
201: FTNRLYNFTG RGDKDPALDS EYAANLKSRK YPSLKDNTTI VEMDPGSHKM FDLSYYQLLL KRRGLFQSDS ALTTNPTTLS NINQILKGSV EGFFFEFAKS
301: MEKMGRINVK TGSAGVVRKQ CSVANS

Best Arabidopsis Sequence Match ( AT1G05260.1 )
(BLAST)

001: MNCLIAIALS VSFFLVGIVG PIQAQLQMNF YANSCPNAEK IVQDFVSNHV SNAPSLAAAL IRMHFHDCFV RGCDGSVLIN STSGNAERDA TPNLTVRGFG
101: FIDAIKSVLE AQCPGIVSCA DIIALASRDA VVFTGGPNWS VPTGRRDGRI SNAAEALANI PPPTSNITNL QTLFANQGLD LKDLVLLSGA HTIGVSHCSS
201: FTNRLYNFTG RGGQDPALDS EYAANLKSRK CPSLNDNKTI VEMDPGSRKT FDLSYYQLVL KRRGLFQSDS ALTTNPTTLS NINRILTGSV GSFFSEFAKS
301: MEKMGRINVK TGSAGVVRRQ CSVANS

Arabidopsis Description

PER3Peroxidase [Source:UniProtKB/TrEMBL;Acc:Q0WSR2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.