CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 3
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87544	Canola	cytosol, golgi, plasma membrane	95.55	88.95
CDY38365	Canola	extracellular	80.42	80.65
AT1G77100.1	Thale cress	extracellular, golgi	74.48	78.68
CDX79195	Canola	extracellular	59.64	63.01
VIT_18s0001g15390.t01	Wine grape	cytosol	48.66	57.95
PGSC0003DMT400063828	Potato	cytosol, extracellular, nucleus	46.29	57.14
CDX94393	Canola	extracellular	51.93	53.68
CDX89378	Canola	extracellular	51.63	53.37
GSMUA_Achr3P16520_001	Banana	extracellular	49.85	50.6
TraesCS4D01G102600.1	Wheat	extracellular	48.07	49.24
TraesCS4B01G105800.1	Wheat	extracellular	48.07	49.24
TraesCS4A01G201700.1	Wheat	extracellular	48.07	49.24
Os12t0191500-01	Rice	extracellular	47.18	48.62
TraesCS2D01G352500.1	Wheat	extracellular	46.29	47.42
Zm00001d041827_P001	Maize	extracellular	47.48	47.34
TraesCS2B01G372500.1	Wheat	extracellular	45.99	47.11
Os11t0210100-01	Rice	extracellular	46.59	47.01
EES16804	Sorghum	extracellular, golgi	47.48	46.92
EES08383	Sorghum	extracellular, vacuole	47.48	46.92
TraesCS2A01G355800.2	Wheat	extracellular	45.99	46.83
Zm00001d035336_P002	Maize	mitochondrion	47.18	46.63
CDY22526	Canola	extracellular	41.54	46.05
Zm00001d049071_P001	Maize	extracellular, golgi	46.88	45.8
CDY43791	Canola	extracellular	44.51	45.73
CDY66486	Canola	extracellular	44.51	45.73
CDY70734	Canola	extracellular	31.45	45.3
CDY35411	Canola	extracellular	43.92	45.26
CDY06919	Canola	extracellular	43.62	45.09
CDY50836	Canola	extracellular	43.32	44.51
CDY14775	Canola	extracellular	43.03	44.48
Solyc04g064690.2.1	Tomato	extracellular, vacuole	51.04	44.44
CDY31334	Canola	extracellular	42.73	44.04
CDY39825	Canola	extracellular	42.73	43.9
CDY15537	Canola	extracellular	27.6	43.87
CDY37007	Canola	extracellular	41.25	43.71
CDY69305	Canola	extracellular	41.54	43.61
CDY13252	Canola	extracellular	41.84	43.25
CDY10042	Canola	extracellular	20.77	43.21
CDY49517	Canola	extracellular	40.95	43.12
CDX86795	Canola	extracellular	41.54	42.94
CDY46844	Canola	extracellular, golgi	40.65	42.81
CDY15538	Canola	extracellular	41.84	42.47
CDY65912	Canola	extracellular	40.36	42.37
CDY59800	Canola	extracellular	40.95	42.33
CDY10039	Canola	extracellular	40.36	42.11
CDY46843	Canola	extracellular	40.06	42.06
CDY49516	Canola	extracellular	40.06	42.06
CDY10037	Canola	extracellular	40.65	42.02
CDY65910	Canola	extracellular	41.84	41.96
CDY59801	Canola	extracellular	41.84	41.96
CDY55444	Canola	extracellular	41.25	41.87
CDY46845	Canola	extracellular	40.06	41.41
CDX75919	Canola	extracellular	39.76	41.36
CDY43275	Canola	extracellular	38.87	41.07
CDY55811	Canola	extracellular, golgi, vacuole	38.87	41.07
CDY37537	Canola	extracellular	38.87	41.07
CDY10038	Canola	extracellular	40.36	40.96
CDX91005	Canola	extracellular	40.06	40.91
CDX85056	Canola	extracellular	39.76	40.73
CDX85561	Canola	extracellular	39.76	40.61
CDY39826	Canola	extracellular, golgi	39.76	40.24
CDY49518	Canola	extracellular	38.87	40.18
CDY43790	Canola	extracellular	39.47	39.94
CDY10040	Canola	extracellular	37.98	39.88
CDY55446	Canola	extracellular	40.06	39.71
CDY31335	Canola	extracellular	39.17	39.64
CDX84492	Canola	extracellular	24.33	39.23
CDY43789	Canola	extracellular	38.87	39.22
CDX84491	Canola	extracellular	38.87	39.22
CDX84494	Canola	extracellular	38.87	39.22
CDY65911	Canola	extracellular	36.5	39.17
CDX84495	Canola	extracellular	38.28	38.74
CDY38641	Canola	extracellular	36.8	38.04
CDY55649	Canola	vacuole	37.09	37.99
CDY19299	Canola	vacuole	37.09	37.99
CDY33143	Canola	extracellular	36.2	33.42
CDY14412	Canola	extracellular, golgi	35.01	32.87
CDY07679	Canola	endoplasmic reticulum, extracellular, golgi	34.72	32.59
CDX69544	Canola	extracellular	39.76	32.45

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:A0A078DGI2	EnsemblPlants:CDX88340
ProteinID:CDX88340	ProteinID:CDX88340.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488
GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0020037	GO:GO:0042744	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00147857001	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00436	PFscan:PS50873
PANTHER:PTHR31235	PANTHER:PTHR31235:SF16	MetaCyc:PWY-5461	MetaCyc:PWY-7214	MetaCyc:PWY-7445	InterPro:Peroxidase_pln
InterPro:Peroxidases_AS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	TMHMM:TMhelix	UniParc:UPI0004EE585D	SEG:seg

Description

BnaC06g37840D

Coordinates

chrLK031855:-:449255..450553

Molecular Weight (calculated)

36670.4 Da

IEP (calculated)

4.822

GRAVY (calculated)

-0.082

Length

337 amino acids

Sequence
(BLAST)

001: MSRGVRESIS KHSFSSRMIT IGIFLVLFSA HDLFNFSEAQ QLQFGFYSET CPSAESIVGD VVKQAVSKDP GNAAVLLRLH FHDCFVEGCD GSILIKHEVN
101: DDERFAPGNA GVGGFDVIDN AKSELERLCP GVVSCADIVA LAARDAVIAA KGPFYEVPTG RRDGLTSDKS NAANLPDVED SINILKSKFK EKGLSDKDLV
201: LLSAGAHTIG TTACFFIMSR LDAQDSTISP EFFQVLRSKC PKGGDVNIRI PLDWESQFVF DEQIFRNIRD GKGVIKSDSV LYQDNDMKNI IESYLASNES
301: SEANFAADFA EAMVKMGVIG VKTGVQGEVR RICNATN

Best Arabidopsis Sequence Match ( AT1G77100.1 )
(BLAST)

001: MITIALFLVL LYFHDQLGYS AAQLQFGFYS ETCPSAESIV RDVVQQAVTN DPGKAAVLLR LQFHDCFVEG CDGSILIKHG GNDDERFAAG NAGVAGFDVI
101: DEAKSELERF CPGVVSCADI VALAARDAIA EAKGPFYEVP TGRRDGLIAN VDHAKNLPDV QDSINTLKSK FREKGLSDQD LVLLSAGAHT IGTTACFFVI
201: PRLDAQDPTI NPEFFQILRS KCPQGGDVNV RIPLDWDSQF VFDNQIFQNI KNGRGVILSD SVLYQDNNMK KIIDSYLETN QSSKANFAAD FTKAMIKMGA
301: IGVKIGAEGE IRRLCSATN

Arabidopsis Description

PER13Peroxidase 13 [Source:UniProtKB/Swiss-Prot;Acc:O49293]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.