Factsheet for PGSC0003DMT400063828

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, nucleus, cytosol

Predictor Summary:

extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
plastid 1
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, nucleus
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
MultiLoc:	extracellular
Plant-mPloc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g064690.2.1	Tomato	extracellular, vacuole	94.51	66.67
VIT_18s0001g15390.t01	Wine grape	cytosol	56.41	54.42
PGSC0003DMT400085904	Potato	extracellular	58.61	49.69
Bra008291.1-P	Field mustard	extracellular	56.78	48.59
AT1G77100.1	Thale cress	extracellular, golgi	55.31	47.34
GSMUA_Achr3P16520_001	Banana	extracellular	56.41	46.39
CDX88340	Canola	mitochondrion	57.14	46.29
CDY38365	Canola	extracellular	56.78	46.13
Bra015695.1-P	Field mustard	extracellular, golgi	56.78	45.99
CDX79195	Canola	extracellular	53.11	45.45
TraesCS4D01G102600.1	Wheat	extracellular	53.85	44.68
TraesCS4A01G201700.1	Wheat	extracellular	53.85	44.68
TraesCS4B01G105800.1	Wheat	extracellular	53.48	44.38
Os12t0191500-01	Rice	extracellular	52.01	43.43
Os11t0210100-01	Rice	extracellular	53.11	43.41
CDX87544	Canola	cytosol, golgi, plasma membrane	57.14	43.09
PGSC0003DMT400065498	Potato	extracellular	50.92	42.64
EES08383	Sorghum	extracellular, vacuole	52.75	42.23
Zm00001d049071_P001	Maize	extracellular, golgi	53.11	42.03
Zm00001d041827_P001	Maize	extracellular	51.28	41.42
EES16804	Sorghum	extracellular, golgi	51.65	41.35
TraesCS2D01G352500.1	Wheat	extracellular	49.82	41.34
TraesCS2B01G372500.1	Wheat	extracellular	49.82	41.34
TraesCS2A01G355800.2	Wheat	extracellular	49.45	40.79
Zm00001d035336_P002	Maize	mitochondrion	50.92	40.76
PGSC0003DMT400032789	Potato	extracellular	48.35	39.88
PGSC0003DMT400062520	Potato	extracellular	43.22	36.65
PGSC0003DMT400062533	Potato	extracellular	43.22	36.65
PGSC0003DMT400056119	Potato	extracellular	43.59	36.28
PGSC0003DMT400062515	Potato	extracellular	42.86	36.11
PGSC0003DMT400054080	Potato	extracellular	31.5	35.68
PGSC0003DMT400013503	Potato	extracellular	41.39	35.09
PGSC0003DMT400001848	Potato	extracellular	42.49	35.05
PGSC0003DMT400058799	Potato	extracellular	41.39	34.77
PGSC0003DMT400065517	Potato	extracellular	41.03	34.04
PGSC0003DMT400065516	Potato	extracellular	41.03	34.04
PGSC0003DMT400038889	Potato	extracellular	40.66	33.95
PGSC0003DMT400013504	Potato	extracellular	40.66	33.95
PGSC0003DMT400065518	Potato	extracellular	40.66	33.84
PGSC0003DMT400058807	Potato	extracellular	39.93	33.54
PGSC0003DMT400079041	Potato	cytosol	37.73	33.01
PGSC0003DMT400013520	Potato	extracellular	37.73	31.5
PGSC0003DMT400062534	Potato	extracellular	37.36	30.45
PGSC0003DMT400001851	Potato	extracellular	43.22	19.93

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037	GO:GO:0042744	GO:GO:0046872
GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	UniProt:M1CBB8
PFAM:PF00141	EnsemblPlantsGene:PGSC0003DMG400024813	PGSC:PGSC0003DMG400024813	EnsemblPlants:PGSC0003DMT400063828	PRINTS:PR00458	PRINTS:PR00461
ScanProsite:PS00435	PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF16	InterPro:Peroxidase_pln	InterPro:Peroxidases_heam-ligand_BS
SUPFAM:SSF48113	InterPro:Secretory_peroxidase	UniParc:UPI000294E578	SEG:seg	:	:

Description

Class III peroxidase [Source:PGSC_GENE;Acc:PGSC0003DMG400024813]

Coordinates

chr4:-:58199228..58201394

Molecular Weight (calculated)

29850.7 Da

IEP (calculated)

5.681

GRAVY (calculated)

-0.185

Length

273 amino acids

Sequence
(BLAST)

001: MPAILLRLHF HDCFVQGCDG SILIDNVKEA ERNAFGHEGL GGFAEIQTAK TQLEVQCPGV VSCADIVALA ARDAVVMAGG ESYEVETGRR DGRVSDLSFA
101: SKMPDVDDSI EVLKEKFKTK GFTEKDLVIL SGAHTIGTTA CFFMPKRLYN FTGKSDADPS INPKFLPELR SKCPKNGNVN VRISLDNLSE RKFDDQIMHN
201: IKNGFAVIAS DARLYDDNIT KAVVDSYLEI TEKSNPNSSS FGNDFGLAMV KLGRLEVKTG LLGEIRKVGD HIV

Best Arabidopsis Sequence Match ( AT4G25980.1 )
(BLAST)

001: MVWANAKMRL ALSLVTVFFG ISLANLEVGF YSNTCPQAES IVKRVVSGAA LSDPNLPAIL LRLHFHDCFV EGCDGSILVN NGAISEKNAF GHEGVRGFEI
101: VEAVKAELEA ACPGVVSCSD IVALAARDAI SLANGPAYEV PTGRRDGRVS NMSLAKDMPE VSDSIEILKA KFMQKGLNAK DLVLLSAAHT IGTTACFFMS
201: KRLYDFLPGG QPDPTINPTF LPELTTQCPQ NGDINVRLPI DRFSERLFDK QILQNIKDGF AVLQTDAGLY EDVTTRQVVD SYLGMLNPFF GPTFESDFVK
301: AIVKMGKIGV KTGFKGEIRR VCSAFN

Arabidopsis Description

PER43Peroxidase 43 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZH2]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.