Factsheet for PGSC0003DMT400054080

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1
peroxisome 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol, peroxisome, plastid
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400062520	Potato	extracellular	90.46	67.7
Solyc08g075830.2.1	Tomato	extracellular	89.63	67.08
PGSC0003DMT400062533	Potato	extracellular	89.21	66.77
PGSC0003DMT400062515	Potato	extracellular	75.1	55.86
PGSC0003DMT400062534	Potato	extracellular	77.59	55.82
PGSC0003DMT400013503	Potato	extracellular	66.39	49.69
CDY15537	Canola	extracellular	43.15	49.06
VIT_12s0059g02410.t01	Wine grape	extracellular	65.15	47.87
CDY70734	Canola	extracellular	43.15	44.44
PGSC0003DMT400056119	Potato	extracellular	59.34	43.6
Bra032476.1-P	Field mustard	extracellular	56.02	42.19
CDY69305	Canola	extracellular	56.02	42.06
CDY65912	Canola	extracellular	54.36	40.81
Bra032477.1-P	Field mustard	extracellular	54.36	40.81
CDY49516	Canola	extracellular	53.94	40.5
AT1G05250.1	Thale cress	extracellular	54.36	40.31
AT1G05240.1	Thale cress	extracellular	54.36	40.31
CDY46843	Canola	extracellular	53.53	40.19
Bra030607.1-P	Field mustard	extracellular	55.19	40.06
Bra015402.1-P	Field mustard	extracellular	53.11	39.88
CDY15538	Canola	extracellular	54.77	39.76
CDY55444	Canola	extracellular	54.77	39.76
CDY49517	Canola	extracellular	52.7	39.69
CDY65911	Canola	extracellular	51.45	39.49
CDY10038	Canola	extracellular	54.36	39.46
CDY46844	Canola	extracellular, golgi	52.28	39.38
Bra015403.1-P	Field mustard	extracellular	52.28	39.38
CDY10039	Canola	extracellular	52.28	39.01
CDY10040	Canola	extracellular	51.04	38.32
CDX75919	Canola	extracellular	51.45	38.27
CDY65910	Canola	extracellular	53.11	38.1
CDY59801	Canola	extracellular	52.28	37.5
Bra030606.1-P	Field mustard	extracellular	52.7	37.35
PGSC0003DMT400065518	Potato	extracellular	50.21	36.89
PGSC0003DMT400001848	Potato	extracellular	50.62	36.86
CDY55446	Canola	extracellular	51.87	36.76
PGSC0003DMT400038889	Potato	extracellular	49.79	36.7
PGSC0003DMT400013504	Potato	extracellular	48.96	36.09
PGSC0003DMT400058799	Potato	extracellular	48.55	36.0
PGSC0003DMT400065516	Potato	extracellular	48.96	35.87
Bra032475.1-P	Field mustard	extracellular	47.3	35.74
PGSC0003DMT400065517	Potato	extracellular	48.55	35.56
PGSC0003DMT400013520	Potato	extracellular	48.13	35.47
PGSC0003DMT400032789	Potato	extracellular	46.47	33.84
PGSC0003DMT400065498	Potato	extracellular	45.64	33.74
PGSC0003DMT400058807	Potato	extracellular	45.23	33.54
PGSC0003DMT400079041	Potato	cytosol	43.15	33.33
PGSC0003DMT400063828	Potato	cytosol, extracellular, nucleus	35.68	31.5
PGSC0003DMT400085904	Potato	extracellular	39.0	29.19
PGSC0003DMT400001851	Potato	extracellular	50.21	20.44

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0020037	GO:GO:0042744	GO:GO:0046872
GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	UniProt:M1BVU0
PFAM:PF00141	EnsemblPlantsGene:PGSC0003DMG400020975	PGSC:PGSC0003DMG400020975	EnsemblPlants:PGSC0003DMT400054080	PRINTS:PR00458	PRINTS:PR00461
ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF17	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS
SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	UniParc:UPI0002969161	:	:

Description

Peroxidase 27 [Source:PGSC_GENE;Acc:PGSC0003DMG400020975]

Coordinates

chr5:-:23721320..23722830

Molecular Weight (calculated)

26600.6 Da

IEP (calculated)

8.284

GRAVY (calculated)

0.120

Length

241 amino acids

Sequence
(BLAST)

001: MATLKFLCFL ILQLFLVANC EGVEVGFYNE TCPNVEIILK ETTKHYISIA PTLAAPLLRM HFHDCFVRGC DGSVLLNSTK GNKTEKDEIP NQSLRGFQVI
101: DATKSALEKE CPGIVSCSDI LALTARDAVS MINGPTWPVP LGRRDGIVLI LLEASKNLPT PFDNFTTLKT TFGALGLNVK DLVVLSALLT NTQTKDYVLS
201: QLYLHGSTFF KDFGESMVKM RQIGVLTGKA GEIRKHRAFR N

Best Arabidopsis Sequence Match ( AT1G05240.1 )
(BLAST)

001: MAIKNILALV VLLSVVGVSV AIPQLLDLDY YRSKCPKAEE IVRGVTVQYV SRQKTLAAKL LRMHFHDCFV RGCDGSVLLK SAKNDAERDA VPNLTLKGYE
101: VVDAAKTALE RKCPNLISCA DVLALVARDA VAVIGGPWWP VPLGRRDGRI SKLNDALLNL PSPFADIKTL KKNFANKGLN AKDLVVLSGG HTIGISSCAL
201: VNSRLYNFTG KGDSDPSMNP SYVRELKRKC PPTDFRTSLN MDPGSALTFD THYFKVVAQK KGLFTSDSTL LDDIETKNYV QTQAILPPVF SSFNKDFSDS
301: MVKLGFVQIL TGKNGEIRKR CAFPN

Arabidopsis Description

PER1Peroxidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q67Z07]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.