Factsheet for VIT_12s0059g02410.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400013503	Potato	extracellular	71.34	72.67
Solyc05g046000.2.1	Tomato	extracellular	70.73	72.05
PGSC0003DMT400062520	Potato	extracellular	69.21	70.5
Solyc08g075830.2.1	Tomato	extracellular	68.29	69.57
PGSC0003DMT400062515	Potato	extracellular	68.29	69.14
PGSC0003DMT400062533	Potato	extracellular	67.68	68.94
Solyc12g005790.1.1	Tomato	extracellular	67.68	68.52
VIT_10s0116g00340.t01	Wine grape	extracellular	67.68	68.1
PGSC0003DMT400054080	Potato	extracellular	47.87	65.15
CDY70734	Canola	extracellular	45.12	63.25
Bra032477.1-P	Field mustard	extracellular	59.45	60.75
CDY65912	Canola	extracellular	59.45	60.75
CDY49516	Canola	extracellular	59.45	60.75
CDY46843	Canola	extracellular	59.15	60.44
Bra015402.1-P	Field mustard	extracellular	58.84	60.12
CDY49517	Canola	extracellular	58.54	60.0
Bra032476.1-P	Field mustard	extracellular	58.23	59.69
CDY69305	Canola	extracellular	58.23	59.5
AT1G05250.1	Thale cress	extracellular	58.84	59.38
AT1G05240.1	Thale cress	extracellular	58.84	59.38
Bra015403.1-P	Field mustard	extracellular	57.93	59.38
CDY46844	Canola	extracellular, golgi	57.93	59.38
CDX75919	Canola	extracellular	58.54	59.26
PGSC0003DMT400062534	Potato	extracellular	59.45	58.21
CDY10040	Canola	extracellular	56.71	57.94
CDY55444	Canola	extracellular	57.32	56.63
CDY10039	Canola	extracellular	55.49	56.35
VIT_07s0104g01100.t01	Wine grape	extracellular	55.18	56.04
CDY65910	Canola	extracellular	57.01	55.65
CDY59801	Canola	extracellular	57.01	55.65
CDY10038	Canola	extracellular	56.1	55.42
Bra030607.1-P	Field mustard	extracellular	56.1	55.42
Bra030606.1-P	Field mustard	extracellular	57.01	55.0
VIT_05s0020g02120.t01	Wine grape	cytosol	43.9	54.96
CDY15538	Canola	extracellular	55.49	54.82
CDY15537	Canola	extracellular	35.06	54.25
Bra032475.1-P	Field mustard	extracellular	52.74	54.23
CDY55446	Canola	extracellular	56.1	54.12
CDY65911	Canola	extracellular	51.22	53.5
VIT_12s0055g01000.t01	Wine grape	plastid	45.12	47.59
VIT_12s0055g01010.t01	Wine grape	plastid	45.12	47.59
VIT_12s0055g01020.t01	Wine grape	plastid	44.51	46.95
VIT_12s0055g01030.t01	Wine grape	extracellular	46.34	46.91
VIT_12s0055g00810.t01	Wine grape	extracellular	44.82	45.51
VIT_11s0016g05320.t01	Wine grape	extracellular	44.82	45.37
VIT_12s0055g00980.t01	Wine grape	extracellular	41.16	45.3
VIT_18s0001g15390.t01	Wine grape	cytosol	35.98	41.7
VIT_05s0020g02110.t01	Wine grape	plastid	32.62	41.47
VIT_11s0016g05280.t01	Wine grape	extracellular	43.9	22.19

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:100260174	wikigene:100260174	MapMan:35.1
ProteinID:CCB52049	ProteinID:CCB52049.1	UniProt:F6HIK3	EMBL:FN595765	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009505
GO:GO:0009506	GO:GO:0009664	GO:GO:0009987	GO:GO:0016043	GO:GO:0016491	GO:GO:0020037
GO:GO:0030312	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	EntrezGene:LOC100260174	wikigene:LOC100260174	PFAM:PF00141	PRINTS:PR00458
PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF17
InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-TM
TMHMM:TMhelix	UniParc:UPI00015CB2E0	ArrayExpress:VIT_12s0059g02410	EnsemblPlantsGene:VIT_12s0059g02410	EnsemblPlants:VIT_12s0059g02410.t01	RefSeq:XP_002274157
RefSeq:XP_002274157.2	:	:	:	:	:

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:F6HIK3]

Coordinates

chr12:+:7187086..7188356

Molecular Weight (calculated)

35731.7 Da

IEP (calculated)

10.040

GRAVY (calculated)

-0.020

Length

328 amino acids

Sequence
(BLAST)

001: MSSQKLFSAF FLQVILATLV LGVANVQCLK LGFYKKTCPA AEDIVRKTTA QYISKAPTLA APLLRMHFHD CFVRGCDGSV LLNSTKNNQA EKDAIPNLSL
101: RGYHVIDAAK SAVEKKCPGV VSCADILALV ARDAVSMING PYWKVPTGRR DGKVSVALEA LINLPPPFAN ITQLKSMFHS KGLSVKDLVV LSGGHTIGIS
201: HCSSFTNRLY NFTGKGDTDP SMDPNYVIQL KKKCRPGDVT TIVEMDPGSF KTFDGDYYTM VAKRRGLFQS DVALLDDVQT RKYVKLHSFS HGKSFGKDFA
301: ASMVKMGKVG VLTGKAGGIR KYCAFVNK

Best Arabidopsis Sequence Match ( AT3G01190.1 )
(BLAST)

001: MAASKRLVVS CLFLVLLFAQ ANSQGLKVGF YSKTCPQLEG IVKKVVFDAM NKAPTLGAPL LRMFFHDCFV RGCDGSVLLD KPNNQGEKSA VPNLSLRGFG
101: IIDDSKAALE KVCPGIVSCS DILALVARDA MVALEGPSWE VETGRRDGRV SNINEVNLPS PFDNITKLIS DFRSKGLNEK DLVILSGGHT IGMGHCPLLT
201: NRLYNFTGKG DSDPSLDSEY AAKLRKKCKP TDTTTALEMD PGSFKTFDLS YFTLVAKRRG LFQSDAALLD NSKTRAYVLQ QIRTHGSMFF NDFGVSMVKM
301: GRTGVLTGKA GEIRKTCRSA N

Arabidopsis Description

PER27Peroxidase [Source:UniProtKB/TrEMBL;Acc:A0A178V802]
SUBAcon: [golgi,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.