Factsheet for VIT_12s0055g00810.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43937	Soybean	extracellular	71.83	71.6
KRH10491	Soybean	extracellular	70.59	70.59
PGSC0003DMT400085904	Potato	extracellular	69.04	69.25
Solyc10g047110.1.1	Tomato	extracellular	59.75	67.48
Bra013938.1-P	Field mustard	extracellular	66.56	65.95
CDX94393	Canola	extracellular	66.56	65.95
Solyc01g104860.2.1	Tomato	extracellular	65.02	65.62
CDX89378	Canola	extracellular	65.94	65.34
AT4G25980.1	Thale cress	extracellular, plasma membrane	65.63	65.03
VIT_18s0001g15390.t01	Wine grape	cytosol	54.8	62.54
GSMUA_Achr3P16520_001	Banana	extracellular	60.68	59.04
TraesCS4D01G102600.1	Wheat	extracellular	56.97	55.93
TraesCS4A01G201700.1	Wheat	extracellular	56.97	55.93
TraesCS4B01G105800.1	Wheat	extracellular	56.66	55.62
Os12t0191500-01	Rice	extracellular	56.04	55.35
Zm00001d049071_P001	Maize	extracellular, golgi	57.28	53.62
Zm00001d041827_P001	Maize	extracellular	56.04	53.55
EES08383	Sorghum	extracellular, vacuole	56.04	53.08
Zm00001d035336_P002	Maize	mitochondrion	55.73	52.79
TraesCS2D01G352500.1	Wheat	extracellular	53.56	52.58
EES16804	Sorghum	extracellular, golgi	55.42	52.49
TraesCS2B01G372500.1	Wheat	extracellular	53.25	52.28
Os11t0210100-01	Rice	extracellular	53.87	52.1
TraesCS2A01G355800.2	Wheat	extracellular	52.94	51.66
VIT_12s0055g01020.t01	Wine grape	plastid	47.37	49.2
VIT_12s0055g01000.t01	Wine grape	plastid	47.06	48.87
VIT_12s0055g01010.t01	Wine grape	plastid	46.75	48.55
VIT_12s0055g01030.t01	Wine grape	extracellular	48.3	48.15
VIT_11s0016g05320.t01	Wine grape	extracellular	46.75	46.6
VIT_10s0116g00340.t01	Wine grape	extracellular	46.75	46.32
VIT_12s0059g02410.t01	Wine grape	extracellular	45.51	44.82
VIT_05s0020g02120.t01	Wine grape	cytosol	34.67	42.75
VIT_12s0055g00980.t01	Wine grape	extracellular	39.32	42.62
VIT_07s0104g01100.t01	Wine grape	extracellular	39.32	39.32
VIT_05s0020g02110.t01	Wine grape	plastid	23.53	29.46
VIT_11s0016g05280.t01	Wine grape	extracellular	45.2	22.5

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:100260726	wikigene:100260726	MapMan:35.1
ProteinID:CBI20039	ProteinID:CBI20039.3	UniProt:D7STC5	EMBL:FN595228	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009505
GO:GO:0009506	GO:GO:0009664	GO:GO:0009987	GO:GO:0016043	GO:GO:0016491	GO:GO:0020037
GO:GO:0030312	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase
InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	EntrezGene:LOC100260726	wikigene:LOC100260726	PFAM:PF00141	PRINTS:PR00458
PRINTS:PR00461	ScanProsite:PS00435	PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF16	InterPro:Peroxidase_pln
InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM	TIGR:TC55171	TMHMM:TMhelix
UniParc:UPI00015CBB36	ArrayExpress:VIT_12s0055g00810	EnsemblPlantsGene:VIT_12s0055g00810	EnsemblPlants:VIT_12s0055g00810.t01	unigene:Vvi.11963	RefSeq:XP_002270950
RefSeq:XP_002270950.1	SEG:seg	:	:	:	:

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:D7STC5]

Coordinates

chr12:-:14103613..14106187

Molecular Weight (calculated)

34621.2 Da

IEP (calculated)

4.323

GRAVY (calculated)

0.026

Length

323 amino acids

Sequence
(BLAST)

001: MQVMALVLVL IFGFFIGISK AQLSVGFYTE TCPDAESIVG ATVRDAALSN PNILAVLLRL HFHDCYVQGC DGSILIDNDP DAEKHAFGHQ GVGGYEVIEI
101: AKEKLESQCP GVVSCADIVA LAARDAVALA NGPAYQVPTG RRDGRVSNIS LAADMPDVSD SIQQLKSKFL DRGLSEKDLV LLSAAHTIGT TACFFMTDRL
201: YNFFPGGGSD PSISPEFLPE LKAKCPQDGD VNVRLPMDQG SGETFDKKIL ENIRGGFAVL QSDASLMEDE ATKSVIDSYF GPLNSQFGPS FEEDFVNSMV
301: KMGQIGVETG SDGEIRRVCG AFN

Best Arabidopsis Sequence Match ( AT4G25980.1 )
(BLAST)

001: MVWANAKMRL ALSLVTVFFG ISLANLEVGF YSNTCPQAES IVKRVVSGAA LSDPNLPAIL LRLHFHDCFV EGCDGSILVN NGAISEKNAF GHEGVRGFEI
101: VEAVKAELEA ACPGVVSCSD IVALAARDAI SLANGPAYEV PTGRRDGRVS NMSLAKDMPE VSDSIEILKA KFMQKGLNAK DLVLLSAAHT IGTTACFFMS
201: KRLYDFLPGG QPDPTINPTF LPELTTQCPQ NGDINVRLPI DRFSERLFDK QILQNIKDGF AVLQTDAGLY EDVTTRQVVD SYLGMLNPFF GPTFESDFVK
301: AIVKMGKIGV KTGFKGEIRR VCSAFN

Arabidopsis Description

PER43Peroxidase 43 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZH2]
SUBAcon: [plasma membrane,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.