Factsheet for VIT_05s0020g02120.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g067860.2.1	Tomato	extracellular	72.14	57.62
PGSC0003DMT400058807	Potato	extracellular	70.61	56.92
Solyc01g067880.1.1	Tomato	mitochondrion	53.05	53.67
VIT_07s0104g01100.t01	Wine grape	extracellular	65.65	53.25
Solyc01g067870.2.1	Tomato	extracellular	70.61	49.07
VIT_05s0020g02110.t01	Wine grape	plastid	46.56	47.29
VIT_12s0055g01010.t01	Wine grape	plastid	52.29	44.05
VIT_12s0059g02410.t01	Wine grape	extracellular	54.96	43.9
VIT_10s0116g00340.t01	Wine grape	extracellular	53.44	42.94
VIT_12s0055g01020.t01	Wine grape	plastid	50.76	42.77
VIT_12s0055g01000.t01	Wine grape	plastid	50.38	42.44
VIT_12s0055g01030.t01	Wine grape	extracellular	51.91	41.98
VIT_18s0001g15390.t01	Wine grape	cytosol	41.6	38.52
VIT_11s0016g05320.t01	Wine grape	extracellular	47.33	38.27
VIT_12s0055g00980.t01	Wine grape	extracellular	43.51	38.26
VIT_12s0055g00810.t01	Wine grape	extracellular	42.75	34.67
VIT_11s0016g05280.t01	Wine grape	extracellular	48.09	19.41

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:100254434	wikigene:100254434	MapMan:35.1
ProteinID:CBI26133	ProteinID:CBI26133.3	UniProt:D7T6L2	EMBL:FN595749	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005618	GO:GO:0005623	GO:GO:0006950
GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009505	GO:GO:0009506
GO:GO:0009664	GO:GO:0009987	GO:GO:0016043	GO:GO:0016491	GO:GO:0020037	GO:GO:0030312
GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac
InterPro:IPR002016	EntrezGene:LOC100254434	wikigene:LOC100254434	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461
ScanProsite:PS00435	PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF65	InterPro:Peroxidase_pln	InterPro:Peroxidases_heam-ligand_BS
SUPFAM:SSF48113	InterPro:Secretory_peroxidase	UniParc:UPI0001BE2BC9	ArrayExpress:VIT_05s0020g02120	EnsemblPlantsGene:VIT_05s0020g02120	EnsemblPlants:VIT_05s0020g02120.t01
RefSeq:XP_002277879	RefSeq:XP_002277879.1	:	:	:	:

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:D7T6L2]

Coordinates

chr5:+:3846138..3847499

Molecular Weight (calculated)

28253.5 Da

IEP (calculated)

7.732

GRAVY (calculated)

-0.235

Length

262 amino acids

Sequence
(BLAST)

001: MQFHDCFVRG CDASILLDRV GTDQTEKDAR PNLSLSGYDE INDIKSKLEQ ACPGVVSCAD ILALAARDAV SFPSRTPLWD VLTGRRDGNV SLASEVNGNI
101: PSPFSDFSTL KQLFVKKGLN VNDLVALSGA HTIGFAHCGT FSRRLYNFTG KGDADPSLNA TYIESLKAQC PNPANAQTTV EMDPQSSGSF DSSYFNILVQ
201: NKGLFQSDAA LLTDKASSKT VQQLRKPRAF LDEFGKSMKK MAAIGVLTGK AGEIRKQCGV VN

Best Arabidopsis Sequence Match ( AT2G39040.1 )
(BLAST)

001: MANKSLEIRF LFPLVLFLVV KLLCVDGKGF NNNGHKIRKG RWEGKLKMNF YHNSCPGAED IVRQIVWKKV EANRSLAPKL LRVHYHDCFV RGCDASLLLD
101: SVAGKAVSEK EARPNLSLSG FEIIDEIKYI LEKRCPNTVS CADILTLAAR DAVSYEFERP LWNVFTGRVD GRVSLATEAA RDLPSAGANF TTLQKLFAES
201: DLDVVDLVAL SGAHTIGIAH CGVFGRRLLN FTGKGDTDPS LNPSYASFLK SECSDKSLRL NPSAVVGMDP TGPLAFDSGY FVSLLKNKGL FTSDAALLTD
301: PSAAHIASVF QNSGAFLAQF GRSMIKMSSI KVLTLGDQGG EIRKNCRLVN

Arabidopsis Description

PER24Peroxidase 24 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZV04]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.