Factsheet for VIT_12s0055g01020.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0055g01000.t01	Wine grape	plastid	95.82	95.82
VIT_12s0055g01010.t01	Wine grape	plastid	90.03	90.03
VIT_12s0055g01030.t01	Wine grape	extracellular	91.32	87.65
VIT_12s0055g00980.t01	Wine grape	extracellular	71.7	74.83
PGSC0003DMT400032789	Potato	extracellular	75.24	70.69
Solyc01g105070.2.1	Tomato	extracellular	74.6	69.88
KRH10519	Soybean	endoplasmic reticulum	68.17	65.23
KRH10518	Soybean	extracellular	67.2	64.91
KRH43912	Soybean	endoplasmic reticulum	67.2	64.31
Bra028436.1-P	Field mustard	extracellular	64.63	63.21
AT5G39580.1	Thale cress	extracellular	64.31	62.7
CDY37007	Canola	extracellular	63.99	62.58
CDY43791	Canola	extracellular	63.99	60.67
Bra024269.1-P	Field mustard	extracellular	63.99	60.67
CDY50836	Canola	extracellular	63.67	60.37
CDY66486	Canola	extracellular	63.67	60.37
Bra031933.1-P	Field mustard	extracellular	61.74	60.19
AT5G64120.1	Thale cress	extracellular	63.02	59.76
CDY39825	Canola	extracellular	63.02	59.76
CDY31334	Canola	extracellular	62.38	59.33
VIT_11s0016g05320.t01	Wine grape	extracellular	59.81	57.41
KRH43911	Soybean	extracellular	59.16	57.32
CDY43790	Canola	extracellular	55.95	52.25
Bra024268.1-P	Field mustard	extracellular	55.95	52.25
CDY39826	Canola	extracellular, golgi	55.95	52.25
Bra031934.1-P	Field mustard	extracellular, golgi	55.63	51.95
CDY31335	Canola	extracellular	55.63	51.95
AT5G64100.1	Thale cress	extracellular	54.66	51.36
CDX84495	Canola	extracellular	54.66	51.05
VIT_05s0020g02120.t01	Wine grape	cytosol	42.77	50.76
AT5G64110.1	Thale cress	extracellular	53.38	50.3
CDX84494	Canola	extracellular	53.38	49.7
CDX84491	Canola	extracellular	53.38	49.7
CDY43789	Canola	extracellular	53.05	49.4
Bra024267.1-P	Field mustard	extracellular	53.05	49.4
VIT_12s0055g00810.t01	Wine grape	extracellular	49.2	47.37
VIT_18s0001g15390.t01	Wine grape	cytosol	41.16	45.23
VIT_07s0104g01100.t01	Wine grape	extracellular	46.95	45.2
VIT_10s0116g00340.t01	Wine grape	extracellular	46.95	44.79
VIT_12s0059g02410.t01	Wine grape	extracellular	46.95	44.51
VIT_05s0020g02110.t01	Wine grape	plastid	28.62	34.5
VIT_11s0016g05280.t01	Wine grape	extracellular	57.56	27.58

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	EntrezGene:100246878	wikigene:100246878	MapMan:35.1
EMBL:AM466124	ProteinID:CAN63698	ProteinID:CAN63698.1	ProteinID:CCB46166	ProteinID:CCB46166.1	UniProt:F6H1N4
EMBL:FN595228	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009505	GO:GO:0009506	GO:GO:0009664	GO:GO:0009987
GO:GO:0016043	GO:GO:0016491	GO:GO:0020037	GO:GO:0030312	GO:GO:0042744	GO:GO:0046872
GO:GO:0055114	GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	EntrezGene:LOC100246878
wikigene:LOC100246878	PFAM:PF00141	PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436
PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF160	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS
SUPFAM:SSF48113	InterPro:Secretory_peroxidase	UniParc:UPI00015CBC46	ArrayExpress:VIT_12s0055g01020	EnsemblPlantsGene:VIT_12s0055g01020	EnsemblPlants:VIT_12s0055g01020.t01
unigene:Vvi.20632	RefSeq:XP_002269270	RefSeq:XP_002269270.1	:	:	:

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:F6H1N4]

Coordinates

chr12:+:14508797..14509957

Molecular Weight (calculated)

33407.5 Da

IEP (calculated)

7.704

GRAVY (calculated)

-0.144

Length

311 amino acids

Sequence
(BLAST)

001: MAAALVQGQG TRVGFYSRTC PQAESIVQKT VQSHFQSNPA IAPGLLRMHF HDCFVRGCDA SILINGTSTE KTTVPNSLIN GYDVIDDAKT QLEAACPGVV
101: SCADILALAA RDSVVLTKGL TWKVPTGRRD GRVSLASDVN NLPSPRDSIE AQKQKFADKG LTDQDLVTLV GGHTIGTSAC QFFSYRLYNF STTTANGADP
201: SMDATFVTQL QALCPADGDG SRRIALDTGS SNTFDASFFT NLKNGRGVLE SDQKLWTDAS TKTFVQRFLG VRGLLGLNFN VEFGRSMVRM SNIGVQTGTE
301: GEIRRVCTAI N

Best Arabidopsis Sequence Match ( AT5G39580.1 )
(BLAST)

001: MGLVRSFALV IVFLSCLIAV YGQGTRIGFY STTCPNAETI VRTTVASHFG SDPKVAPGLL RMHNHDCFVQ GCDGSVLLSG PNSERTAGAN VNLHGFEVID
101: DAKRQLEAAC PGVVSCADIL ALAARDSVSL TNGQSWQVPT GRRDGRVSLA SNVNNLPSPS DSLAIQQRKF SAFRLNTRDL VTLVGGGHTI GTAACGFITN
201: RIFNSSGNTA DPTMDQTFVP QLQRLCPQNG DGSARVDLDT GSGNTFDTSY FINLSRNRGI LQSDHVLWTS PATRSIVQEF MAPRGNFNVQ FARSMVKMSN
301: IGVKTGTNGE IRRVCSAVN

Arabidopsis Description

PER62Peroxidase 62 [Source:UniProtKB/Swiss-Prot;Acc:Q9FKA4]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.