Factsheet for Solyc01g105070.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
plastid 1
extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

extracellular: 26583031
nucleus: 28394025
extracellular: 29876421

msms PMID: 28394025 doi

AJM Howden, R Stam, V Martinez Heredia, GB Motion, S Ten Have, K Hodge, TM Marques Monteiro Amaro, E Huitema

Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.

msms PMID: 26583031 doi

F Gawehns, L Ma, O Bruning, PM Houterman, S Boeren, BJ Cornelissen, M Rep, FL Takken

Laboratory of Biochemistry, Wageningen University Wageningen, Netherlands., Molecular Plant Pathology, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands., RNA Biology and Applied Bioinformatics Research Group and MAD: Dutch Genomics Service and Support Provider, Faculty of Science, Swammerdam Institute for Life Sciences, University of Amsterdam Amsterdam, Netherlands.

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400032789	Potato	extracellular	94.88	95.17
VIT_12s0055g01010.t01	Wine grape	plastid	70.78	75.56
VIT_12s0055g01020.t01	Wine grape	plastid	69.88	74.6
VIT_12s0055g01000.t01	Wine grape	plastid	69.28	73.95
KRH10519	Soybean	endoplasmic reticulum	71.69	73.23
KRH10518	Soybean	extracellular	70.48	72.67
VIT_12s0055g01030.t01	Wine grape	extracellular	70.18	71.91
KRH43912	Soybean	endoplasmic reticulum	69.88	71.38
VIT_12s0055g00980.t01	Wine grape	extracellular	61.75	68.79
KRH43911	Soybean	extracellular	61.75	63.86
AT5G39580.1	Thale cress	extracellular	60.84	63.32
CDY37007	Canola	extracellular	59.64	62.26
Bra028436.1-P	Field mustard	extracellular	59.64	62.26
AT5G64120.1	Thale cress	extracellular	60.54	61.28
CDY43791	Canola	extracellular	60.24	60.98
CDY66486	Canola	extracellular	60.24	60.98
Bra024269.1-P	Field mustard	extracellular	60.24	60.98
Solyc02g064970.2.1	Tomato	extracellular	59.64	60.74
Bra031933.1-P	Field mustard	extracellular	58.13	60.5
CDY50836	Canola	extracellular	59.64	60.37
CDY31334	Canola	extracellular	59.04	59.94
CDY39825	Canola	extracellular	58.43	59.15
CDY39826	Canola	extracellular, golgi	57.83	57.66
CDY31335	Canola	extracellular	57.23	57.06
Bra031934.1-P	Field mustard	extracellular, golgi	56.93	56.76
AT5G64100.1	Thale cress	extracellular	56.02	56.19
CDY43790	Canola	extracellular	55.12	54.95
Bra024268.1-P	Field mustard	extracellular	55.12	54.95
AT5G64110.1	Thale cress	extracellular	54.52	54.85
CDY43789	Canola	extracellular	54.82	54.49
Bra024267.1-P	Field mustard	extracellular	54.82	54.49
CDX84491	Canola	extracellular	54.82	54.49
CDX84494	Canola	extracellular	54.82	54.49
CDX84495	Canola	extracellular	53.92	53.75
Solyc01g104860.2.1	Tomato	extracellular	46.99	48.75
Solyc08g075830.2.1	Tomato	extracellular	45.78	47.2
Solyc07g049240.2.1	Tomato	extracellular	46.99	47.13
Solyc12g005790.1.1	Tomato	extracellular	44.88	45.99
Solyc07g047740.2.1	Tomato	extracellular	45.78	45.92
Solyc01g067850.2.1	Tomato	extracellular	44.28	45.37
Solyc07g052530.2.1	Tomato	extracellular	44.58	44.98
Solyc05g046020.2.1	Tomato	extracellular	44.28	44.95
Solyc07g052510.2.1	Tomato	extracellular	44.28	44.82
Solyc05g046000.2.1	Tomato	extracellular	43.37	44.72
Solyc07g052540.2.1	Tomato	extracellular	44.28	44.68
Solyc05g046030.2.1	Tomato	extracellular	43.98	44.65
Solyc10g047110.1.1	Tomato	extracellular	38.25	44.41
Solyc07g052550.1.1	Tomato	extracellular	43.67	44.07
Solyc05g046010.2.1	Tomato	extracellular	43.07	43.73
Solyc04g056420.1.1	Tomato	extracellular	35.84	43.59
Solyc01g067860.2.1	Tomato	extracellular	42.47	42.99
Solyc12g005370.1.1	Tomato	extracellular	41.27	41.77
Solyc06g054500.1.1	Tomato	extracellular	39.46	40.31
Solyc01g067880.1.1	Tomato	mitochondrion	31.02	39.77
Solyc04g064690.2.1	Tomato	extracellular, vacuole	46.08	39.53
Solyc01g067870.2.1	Tomato	extracellular	41.57	36.6

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009505
GO:GO:0009506	GO:GO:0009664	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
GO:GO:0016491	GO:GO:0020037	GO:GO:0030312	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114
GO:GO:0098869	InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	UniProt:K4B277	PFAM:PF00141
PRINTS:PR00458	PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31235
PANTHER:PTHR31235:SF160	InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase
EnsemblPlantsGene:Solyc01g105070.2	EnsemblPlants:Solyc01g105070.2.1	TMHMM:TMhelix	UniParc:UPI0002768D7F	SEG:seg	:

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:K4B277]

Coordinates

chr1:+:93354312..93356101

Molecular Weight (calculated)

35957.9 Da

IEP (calculated)

7.699

GRAVY (calculated)

-0.001

Length

332 amino acids

Sequence
(BLAST)

001: MAYYNYNLIN KMVTIIFILV LVIVDVTMVF GQGTRVGFYS STCPRAESIV QSTVRSHFQS DPTVAPGLLR MHFHDCFVQG CDGSILISGT GTERTAPPNS
101: NLRGFEVIDD AKQQIEAVCP GVVSCADILA LAARDSVLVT KGLTWSVPTG RRDGRVSSAS DTSNLPGFTE SVDAQKQKFA AKGLNTQDLV TLVGGHTIGT
201: SACQFFSYRL YNFNSTGGPD PSIDATFLSQ LQALCPQNGD GSKRVALDTG SVNNFDTSYF SNLRNGRGIL ESDQILWTDA STKVFVQRYL GLRGFLGLRF
301: GLEFGKSMVK MSNIEVLTGT NGEIRKVCSA FN

Best Arabidopsis Sequence Match ( AT2G41480.1 )
(BLAST)

001: MGVYLGKYCY IMIIMLVLVL GKEVRSQLLK NGYYSTSCPK AESIVRSTVE SHFDSDPTIS PGLLRLHFHD CFVQGCDGSV LIKGKSAEQA ALPNLGLRGL
101: EVIDDAKARL EAVCPGVVSC ADILALAARD SVDLSDGPSW RVPTGRKDGR ISLATEASNL PSPLDSVAVQ KQKFQDKGLD THDLVTLLGA HTIGQTDCLF
201: FRYRLYNFTV TGNSDPTISP SFLTQLKTLC PPNGDGSKRV ALDIGSPSKF DESFFKNLRD GNAILESDQR LWSDAETNAV VKKYASRLRG LLGFRFDYEF
301: GKAMIKMSSI DVKTDVDGEV RKVCSKVN

Arabidopsis Description

PER25Peroxidase 25 [Source:UniProtKB/Swiss-Prot;Acc:O80822]
SUBAcon: [plasma membrane,golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.