Factsheet for Solyc07g052540.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
plastid 1
extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc04g008430.1.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G05260.1	Solyc04g008430.1.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g052530.2.1	Tomato	extracellular	97.87	97.87
PGSC0003DMT400065517	Potato	extracellular	96.96	96.96
PGSC0003DMT400065516	Potato	extracellular	95.74	95.74
Solyc07g052550.1.1	Tomato	extracellular	94.22	94.22
Solyc07g049240.2.1	Tomato	extracellular	82.98	82.48
Solyc07g047740.2.1	Tomato	extracellular	82.37	81.87
Solyc05g046020.2.1	Tomato	extracellular	81.16	81.65
Solyc05g046030.2.1	Tomato	extracellular	80.55	81.04
Solyc05g046010.2.1	Tomato	extracellular	79.03	79.51
Solyc07g052510.2.1	Tomato	extracellular	76.6	76.83
Solyc04g056420.1.1	Tomato	extracellular	60.49	72.89
Bra032474.1-P	Field mustard	extracellular	61.09	70.03
CDY10037	Canola	extracellular	68.39	69.02
CDY46845	Canola	extracellular	68.09	68.71
CDY59800	Canola	extracellular	68.09	68.71
KRH26822	Soybean	endoplasmic reticulum	67.78	68.4
Bra015404.1-P	Field mustard	extracellular	67.78	68.4
KRH26821	Soybean	endoplasmic reticulum	67.17	67.79
KRH22534	Soybean	extracellular	67.17	67.79
AT1G05260.1	Thale cress	extracellular	66.87	67.48
KRH22535	Soybean	extracellular	66.26	67.28
CDY49518	Canola	extracellular	66.57	67.18
GSMUA_Achr2P03020_001	Banana	extracellular	62.01	67.11
CDX86795	Canola	extracellular	66.26	66.87
Bra035235.1-P	Field mustard	extracellular	66.26	66.87
KRH56093	Soybean	extracellular	65.96	66.77
CDY38641	Canola	extracellular	65.96	66.56
CDY13252	Canola	extracellular	65.96	66.56
Bra031309.1-P	Field mustard	extracellular	65.96	66.56
GSMUA_Achr9P30170_001	Banana	extracellular	59.57	66.22
AT4G11290.1	Thale cress	extracellular	65.05	65.64
CDY55649	Canola	vacuole	64.74	64.74
CDY19299	Canola	vacuole	64.74	64.74
AT3G21770.1	Thale cress	extracellular	64.44	64.44
Bra023862.1-P	Field mustard	vacuole	64.44	64.44
KRH56092	Soybean	extracellular, mitochondrion	62.61	63.58
KRH25412	Soybean	extracellular	62.31	63.27
EER88826	Sorghum	extracellular	62.01	61.63
TraesCS7B01G353200.1	Wheat	extracellular	59.27	58.91
CDY33143	Canola	extracellular	65.35	58.9
TraesCS7D01G442300.1	Wheat	extracellular	59.27	58.73
TraesCS7A01G453000.1	Wheat	extracellular	58.97	58.61
TraesCS7A01G452900.1	Wheat	extracellular	58.05	57.53
HORVU7Hr1G102480.7	Barley	extracellular	58.97	57.4
TraesCS7D01G442200.1	Wheat	extracellular	57.45	56.93
Os06t0681600-01	Rice	extracellular	57.75	56.38
Solyc05g046000.2.1	Tomato	extracellular	54.71	55.9
Zm00001d014467_P002	Maize	vacuole	61.09	55.68
Solyc08g075830.2.1	Tomato	extracellular	52.58	53.73
Solyc12g005370.1.1	Tomato	extracellular	53.5	53.66
Solyc12g005790.1.1	Tomato	extracellular	52.58	53.4
KRH25410	Soybean	cytosol	39.82	53.25
CDY10042	Canola	extracellular	25.84	52.47
Solyc01g067850.2.1	Tomato	extracellular	51.67	52.47
TraesCS6A01G136500.1	Wheat	extracellular	51.98	52.29
TraesCS7B01G353100.1	Wheat	extracellular	57.45	51.5
TraesCS6B01G164400.2	Wheat	extracellular	52.28	50.15
TraesCS6D01G125500.1	Wheat	extracellular	52.28	50.0
Os02t0161800-01	Rice	extracellular, mitochondrion	51.98	49.14
EES06321	Sorghum	extracellular, golgi, plastid	51.98	48.58
HORVU6Hr1G026230.5	Barley	extracellular	50.46	48.26
Solyc01g067880.1.1	Tomato	mitochondrion	37.69	47.88
Solyc01g067860.2.1	Tomato	extracellular	47.72	47.87
Solyc06g054500.1.1	Tomato	extracellular	46.5	47.08
Solyc02g064970.2.1	Tomato	extracellular	45.59	46.01
Solyc01g105070.2.1	Tomato	extracellular	44.68	44.28
Zm00001d053839_P001	Maize	extracellular	29.18	43.24
Solyc01g104860.2.1	Tomato	extracellular	40.73	41.88
Solyc01g067870.2.1	Tomato	extracellular	47.11	41.11
Solyc10g047110.1.1	Tomato	extracellular	35.26	40.56
Solyc04g064690.2.1	Tomato	extracellular, vacuole	39.21	33.33

Protein Annotations

KEGG:00940+1.11.1.7	Gene3D:1.10.420.10	Gene3D:1.10.520.10	MapMan:35.1	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0006950	GO:GO:0006979	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009505	GO:GO:0009506	GO:GO:0009664	GO:GO:0009987	GO:GO:0016043	GO:GO:0016491
GO:GO:0020037	GO:GO:0030312	GO:GO:0042744	GO:GO:0046872	GO:GO:0055114	GO:GO:0098869
InterPro:Haem_peroxidase	InterPro:Haem_peroxidase_pln/fun/bac	InterPro:IPR002016	UniProt:K4CFF3	PFAM:PF00141	PRINTS:PR00458
PRINTS:PR00461	ScanProsite:PS00435	ScanProsite:PS00436	PFscan:PS50873	PANTHER:PTHR31235	PANTHER:PTHR31235:SF39
InterPro:Peroxidase_pln	InterPro:Peroxidases_AS	InterPro:Peroxidases_heam-ligand_BS	SUPFAM:SSF48113	InterPro:Secretory_peroxidase	SignalP:SignalP-noTM
EnsemblPlantsGene:Solyc07g052540.2	EnsemblPlants:Solyc07g052540.2.1	UniParc:UPI000276B82E	:	:	:

Description

Peroxidase [Source:UniProtKB/TrEMBL;Acc:K4CFF3]

Coordinates

chr7:+:61035832..61037571

Molecular Weight (calculated)

35696.9 Da

IEP (calculated)

8.776

GRAVY (calculated)

-0.049

Length

329 amino acids

Sequence
(BLAST)

001: MSTFGLGLFV ICIVGIFLDA SHAQLQLNFY AKSCPKAEKI IEDYVHKHIP NAPSLAAALL RLHFHDCFVR GCDGSVLLNF TSSTKNQTEK VAVPNQTLRG
101: FSFIDGVKKI VEAECPGVVS CADIVTLVAR DSVVVTGGPF WNVPTGRRDG KISNASEALA NIPPPTSNLS SLQTSFANKG LDLKDLVLLS GAHTIGVSHC
201: SSFSTRLYNF TGVLGTQDPS LDSEYASNLK GKKCKSINDN TTIVEMDPGS FRTFDLSYYK LLLKRRGLFQ SDAALTTSST TKSYINKLVK GSLEEFNAEF
301: AKAMEKMGRI EVKTGSAGEI RKQCAFVNK

Best Arabidopsis Sequence Match ( AT1G05260.1 )
(BLAST)

001: MNCLIAIALS VSFFLVGIVG PIQAQLQMNF YANSCPNAEK IVQDFVSNHV SNAPSLAAAL IRMHFHDCFV RGCDGSVLIN STSGNAERDA TPNLTVRGFG
101: FIDAIKSVLE AQCPGIVSCA DIIALASRDA VVFTGGPNWS VPTGRRDGRI SNAAEALANI PPPTSNITNL QTLFANQGLD LKDLVLLSGA HTIGVSHCSS
201: FTNRLYNFTG RGGQDPALDS EYAANLKSRK CPSLNDNKTI VEMDPGSRKT FDLSYYQLVL KRRGLFQSDS ALTTNPTTLS NINRILTGSV GSFFSEFAKS
301: MEKMGRINVK TGSAGVVRRQ CSVANS

Arabidopsis Description

PER3Peroxidase [Source:UniProtKB/TrEMBL;Acc:Q0WSR2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.